RNA–Protein interactions for RNA: ENST00000461405.1

PHF20-208, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-208ENST00000461405 SUCLG2Q96I99 432 aa15.33■□□□□ 0.04
PHF20-208ENST00000461405 PIM2Q9P1W9 311 aa15.33■□□□□ 0.04
PHF20-208ENST00000461405 LTBP1Q14766 1721 aa15.32■□□□□ 0.04
PHF20-208ENST00000461405 FOXO4P98177 505 aa15.32■□□□□ 0.04
PHF20-208ENST00000461405 PRPF40BQ6NWY9 871 aaKnown RBP15.32■□□□□ 0.04
PHF20-208ENST00000461405 ZNF622Q969S3 477 aaKnown RBP eCLIP15.32■□□□□ 0.04
PHF20-208ENST00000461405 MEIS3Q99687 375 aa15.32■□□□□ 0.04
PHF20-208ENST00000461405 BCS1LQ9Y276 419 aa15.32■□□□□ 0.04
PHF20-208ENST00000461405 RTL9Q8NET4 1388 aa15.32■□□□□ 0.04
PHF20-208ENST00000461405 A0A1B0GUL6 1792 aa15.31■□□□□ 0.04
PHF20-208ENST00000461405 FER1L6Q2WGJ9 1857 aa15.31■□□□□ 0.04
PHF20-208ENST00000461405 DALRD3Q5D0E6 543 aaKnown RBP15.31■□□□□ 0.04
PHF20-208ENST00000461405 C20orf194Q5TEA3 1177 aa15.31■□□□□ 0.04
PHF20-208ENST00000461405 DZIP1LQ8IYY4 767 aaKnown RBP15.31■□□□□ 0.04
PHF20-208ENST00000461405 TTLL6Q8N841 843 aa15.31■□□□□ 0.04
PHF20-208ENST00000461405 TTLL11Q8NHH1 800 aa15.31■□□□□ 0.04
PHF20-208ENST00000461405 PANK1Q8TE04 598 aa15.31■□□□□ 0.04
PHF20-208ENST00000461405 RPGRQ92834 1020 aaKnown RBP15.31■□□□□ 0.04
PHF20-208ENST00000461405 CRAMP1Q96RY5 1269 aa15.31■□□□□ 0.04
PHF20-208ENST00000461405 C9orf78Q9NZ63 289 aaPredicted RBP15.31■□□□□ 0.04
PHF20-208ENST00000461405 DUOX1Q9NRD9 1551 aa15.31■□□□□ 0.04
PHF20-208ENST00000461405 PELP1Q8IZL8 1130 aaKnown RBP15.3■□□□□ 0.04
PHF20-208ENST00000461405 ANKRD44Q8N8A2 993 aa15.3■□□□□ 0.04
PHF20-208ENST00000461405 C7orf43Q8WVR3 580 aa15.3■□□□□ 0.04
PHF20-208ENST00000461405 CNKSR1Q969H4 720 aa15.3■□□□□ 0.04
PHF20-208ENST00000461405 CCDC85AQ96PX6 553 aaPredicted RBP15.3■□□□□ 0.04
PHF20-208ENST00000461405 SEC31BQ9NQW1 1179 aa15.3■□□□□ 0.04
PHF20-208ENST00000461405 CSF1RP07333 972 aa15.29■□□□□ 0.04
PHF20-208ENST00000461405 FAM161AQ3B820 660 aa15.29■□□□□ 0.04
PHF20-208ENST00000461405 OLFM4Q6UX06 510 aa15.29■□□□□ 0.04
PHF20-208ENST00000461405 CELF1Q92879 486 aaKnown RBP15.29■□□□□ 0.04
PHF20-208ENST00000461405 GREM2Q9H772 168 aa15.29■□□□□ 0.04
PHF20-208ENST00000461405 HSP90B1P14625 803 aaKnown RBP15.28■□□□□ 0.04
PHF20-208ENST00000461405 RRP1P56182 461 aaKnown RBP15.28■□□□□ 0.04
PHF20-208ENST00000461405 GRAPQ13588 217 aa15.28■□□□□ 0.04
PHF20-208ENST00000461405 RABL6Q3YEC7 729 aaPredicted RBP15.28■□□□□ 0.04
PHF20-208ENST00000461405 FTSJ3Q8IY81 847 aaKnown RBP15.28■□□□□ 0.04
PHF20-208ENST00000461405 GRAPLQ8TC17 118 aaPredicted RBP15.28■□□□□ 0.04
PHF20-208ENST00000461405 RBM17Q96I25 401 aaKnown RBP15.28■□□□□ 0.04
PHF20-208ENST00000461405 BICC1Q9H694 974 aaKnown RBP15.28■□□□□ 0.04
PHF20-208ENST00000461405 PPEF1O14829 653 aaPredicted RBP15.27■□□□□ 0.04
PHF20-208ENST00000461405 C21orf2O43822 256 aa15.27■□□□□ 0.04
PHF20-208ENST00000461405 ALDH1B1P30837 517 aa15.27■□□□□ 0.04
PHF20-208ENST00000461405 GPR162Q16538 588 aa15.27■□□□□ 0.04
PHF20-208ENST00000461405 CCDC152Q4G0S7 254 aa15.27■□□□□ 0.04
PHF20-208ENST00000461405 DDX46Q7L014 1031 aaKnown RBP15.27■□□□□ 0.04
PHF20-208ENST00000461405 GOLGB1Q14789 3259 aaKnown RBP15.26■□□□□ 0.03
PHF20-208ENST00000461405 UBTFL1P0CB47 393 aaPredicted RBP15.26■□□□□ 0.03
PHF20-208ENST00000461405 LMBR1LQ6UX01 489 aa15.26■□□□□ 0.03
PHF20-208ENST00000461405 ITPRIPQ8IWB1 547 aa15.26■□□□□ 0.03
PHF20-208ENST00000461405 ZNF219Q9P2Y4 722 aaPredicted RBP15.26■□□□□ 0.03
PHF20-208ENST00000461405 TIAM2Q8IVF5 1701 aa15.26■□□□□ 0.03
PHF20-208ENST00000461405 NFKBIEO00221 500 aa15.25■□□□□ 0.03
PHF20-208ENST00000461405 LRRFIP2Q9Y608 721 aaKnown RBP15.25■□□□□ 0.03
PHF20-208ENST00000461405 ITGA6P23229 1130 aa15.24■□□□□ 0.03
PHF20-208ENST00000461405 PRELPP51888 382 aa15.24■□□□□ 0.03
PHF20-208ENST00000461405 RASSF7Q02833 373 aa15.24■□□□□ 0.03
PHF20-208ENST00000461405 PDE3AQ14432 1141 aa15.24■□□□□ 0.03
PHF20-208ENST00000461405 MVPQ14764 893 aaKnown RBP15.24■□□□□ 0.03
PHF20-208ENST00000461405 COG6Q9Y2V7 657 aa15.24■□□□□ 0.03
PHF20-208ENST00000461405 SBF1O95248 1867 aa15.24■□□□□ 0.03
PHF20-208ENST00000461405 COL4A5P29400 1685 aa15.23■□□□□ 0.03
PHF20-208ENST00000461405 ZBTB7BO15156 539 aaPredicted RBP15.23■□□□□ 0.03
PHF20-208ENST00000461405 GNAI3P08754 354 aa15.23■□□□□ 0.03
PHF20-208ENST00000461405 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.23■□□□□ 0.03
PHF20-208ENST00000461405 ATP6V0A2Q9Y487 856 aa15.23■□□□□ 0.03
PHF20-208ENST00000461405 GRIN3BO60391 1043 aa15.22■□□□□ 0.03
PHF20-208ENST00000461405 BBOX1O75936 387 aa15.22■□□□□ 0.03
PHF20-208ENST00000461405 MS4A1P11836 297 aa15.22■□□□□ 0.03
PHF20-208ENST00000461405 RFX5P48382 616 aaPredicted RBP15.22■□□□□ 0.03
PHF20-208ENST00000461405 RPS8P62241 208 aaKnown RBP15.22■□□□□ 0.03
PHF20-208ENST00000461405 CCDC93Q567U6 631 aa15.22■□□□□ 0.03
PHF20-208ENST00000461405 CHMP3Q9Y3E7 222 aa15.22■□□□□ 0.03
PHF20-208ENST00000461405 UTRNP46939 3433 aa15.21■□□□□ 0.03
PHF20-208ENST00000461405 LTBP3Q9NS15 1303 aa15.21■□□□□ 0.03
PHF20-208ENST00000461405 MTX1Q13505 466 aa15.21■□□□□ 0.03
PHF20-208ENST00000461405 ANKRD18AQ8IVF6 992 aa15.21■□□□□ 0.03
PHF20-208ENST00000461405 SP8Q8IXZ3 490 aa15.21■□□□□ 0.03
PHF20-208ENST00000461405 ZNF594Q96JF6 807 aaPredicted RBP15.21■□□□□ 0.03
PHF20-208ENST00000461405 CDC5LQ99459 802 aaKnown RBP15.21■□□□□ 0.03
PHF20-208ENST00000461405 C1orf115Q9H7X2 142 aa15.21■□□□□ 0.03
PHF20-208ENST00000461405 CHD4Q14839 1912 aa15.21■□□□□ 0.02
PHF20-208ENST00000461405 DICER1Q9UPY3 1922 aaKnown RBP15.2■□□□□ 0.02
PHF20-208ENST00000461405 ANKRD18BA2A2Z9 1011 aa15.2■□□□□ 0.02
PHF20-208ENST00000461405 IFIT5Q13325 482 aaKnown RBP15.2■□□□□ 0.02
PHF20-208ENST00000461405 SOGA3Q5TF21 947 aa15.2■□□□□ 0.02
PHF20-208ENST00000461405 TMC4Q7Z404 712 aa15.2■□□□□ 0.02
PHF20-208ENST00000461405 DDX19BQ9UMR2 479 aa15.2■□□□□ 0.02
PHF20-208ENST00000461405 CCDC88AQ3V6T2 1871 aa15.2■□□□□ 0.02
PHF20-208ENST00000461405 GNAI2P04899 355 aa15.19■□□□□ 0.02
PHF20-208ENST00000461405 CC2D2BQ6DHV5 1058 aa15.19■□□□□ 0.02
PHF20-208ENST00000461405 ARHGAP27Q6ZUM4 889 aa15.19■□□□□ 0.02
PHF20-208ENST00000461405 KLHDC4Q8TBB5 520 aa15.19■□□□□ 0.02
PHF20-208ENST00000461405 BSDC1Q9NW68 430 aaPredicted RBP15.19■□□□□ 0.02
PHF20-208ENST00000461405 PNMA6EA0A0J9YXQ4 647 aa15.18■□□□□ 0.02
PHF20-208ENST00000461405 GPSM2P81274 684 aa15.18■□□□□ 0.02
PHF20-208ENST00000461405 FKBP4Q02790 459 aaKnown RBP eCLIP15.18■□□□□ 0.02
PHF20-208ENST00000461405 CCDC57Q2TAC2 916 aa15.18■□□□□ 0.02
PHF20-208ENST00000461405 PSMD1Q99460 953 aa15.18■□□□□ 0.02
PHF20-208ENST00000461405 TAOK3Q9H2K8 898 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms