RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 FAM89AQ96GI7 184 aa17.43■□□□□ 0.38
CHRD-209ENST00000461120 A0A0G2JLW4 131 aa17.42■□□□□ 0.38
CHRD-209ENST00000461120 RTL5Q5HYW3 569 aaPredicted RBP17.42■□□□□ 0.38
CHRD-209ENST00000461120 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
CHRD-209ENST00000461120 DZIP1LQ8IYY4 767 aaKnown RBP17.42■□□□□ 0.38
CHRD-209ENST00000461120 ZC3H4Q9UPT8 1303 aaKnown RBP17.42■□□□□ 0.38
CHRD-209ENST00000461120 KIAA1551Q9HCM1 1747 aa17.41■□□□□ 0.38
CHRD-209ENST00000461120 RIC1Q4ADV7 1423 aa17.41■□□□□ 0.38
CHRD-209ENST00000461120 H7C1W4 665 aa17.41■□□□□ 0.38
CHRD-209ENST00000461120 RLBP1P12271 317 aa17.41■□□□□ 0.38
CHRD-209ENST00000461120 FTSJ3Q8IY81 847 aaKnown RBP17.41■□□□□ 0.38
CHRD-209ENST00000461120 JARID2Q92833 1246 aaPredicted RBP17.41■□□□□ 0.38
CHRD-209ENST00000461120 BRIP1Q9BX63 1249 aa17.41■□□□□ 0.38
CHRD-209ENST00000461120 ANKRD31Q8N7Z5 1873 aa17.41■□□□□ 0.38
CHRD-209ENST00000461120 GRM8O00222 908 aa17.4■□□□□ 0.38
CHRD-209ENST00000461120 MS4A1P11836 297 aa17.4■□□□□ 0.38
CHRD-209ENST00000461120 CASP7P55210 303 aa17.4■□□□□ 0.38
CHRD-209ENST00000461120 RRP1P56182 461 aaKnown RBP17.4■□□□□ 0.38
CHRD-209ENST00000461120 TMEM57Q8N5G2 664 aa17.4■□□□□ 0.38
CHRD-209ENST00000461120 PANK1Q8TE04 598 aa17.4■□□□□ 0.38
CHRD-209ENST00000461120 CDHR2Q9BYE9 1310 aa17.4■□□□□ 0.38
CHRD-209ENST00000461120 IRS4O14654 1257 aaPredicted RBP17.39■□□□□ 0.37
CHRD-209ENST00000461120 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.37
CHRD-209ENST00000461120 UBE3BQ7Z3V4 1068 aa17.39■□□□□ 0.37
CHRD-209ENST00000461120 C9orf78Q9NZ63 289 aaPredicted RBP17.39■□□□□ 0.37
CHRD-209ENST00000461120 PDE6BP35913 854 aa17.38■□□□□ 0.37
CHRD-209ENST00000461120 PDE3AQ14432 1141 aa17.38■□□□□ 0.37
CHRD-209ENST00000461120 USP44Q9H0E7 712 aa17.38■□□□□ 0.37
CHRD-209ENST00000461120 UTYO14607 1347 aa17.38■□□□□ 0.37
CHRD-209ENST00000461120 DDX60Q8IY21 1712 aaKnown RBP17.38■□□□□ 0.37
CHRD-209ENST00000461120 LAMB2P55268 1798 aa17.38■□□□□ 0.37
CHRD-209ENST00000461120 KLRG2A4D1S0 409 aaPredicted RBP17.37■□□□□ 0.37
CHRD-209ENST00000461120 C20orf194Q5TEA3 1177 aa17.37■□□□□ 0.37
CHRD-209ENST00000461120 C3orf67Q6ZVT6 689 aa17.37■□□□□ 0.37
CHRD-209ENST00000461120 CNTNAP1P78357 1384 aa17.37■□□□□ 0.37
CHRD-209ENST00000461120 NBPF7P0C2Y1 421 aaPredicted RBP17.36■□□□□ 0.37
CHRD-209ENST00000461120 HSP90B1P14625 803 aaKnown RBP17.36■□□□□ 0.37
CHRD-209ENST00000461120 C2CD5Q86YS7 1000 aa17.36■□□□□ 0.37
CHRD-209ENST00000461120 NLRP3Q96P20 1036 aa17.36■□□□□ 0.37
CHRD-209ENST00000461120 WBP1LQ9NX94 342 aa17.36■□□□□ 0.37
CHRD-209ENST00000461120 PDZRN3Q9UPQ7 1066 aa17.36■□□□□ 0.37
CHRD-209ENST00000461120 GLTPD2A6NH11 291 aa17.35■□□□□ 0.37
CHRD-209ENST00000461120 PDE8AO60658 829 aa17.35■□□□□ 0.37
CHRD-209ENST00000461120 DPEP1P16444 411 aa17.35■□□□□ 0.37
CHRD-209ENST00000461120 CHRNA5P30532 468 aa17.35■□□□□ 0.37
CHRD-209ENST00000461120 CRY2Q49AN0 593 aa17.35■□□□□ 0.37
CHRD-209ENST00000461120 ITPRIPQ8IWB1 547 aa17.35■□□□□ 0.37
CHRD-209ENST00000461120 MEIS3Q99687 375 aa17.35■□□□□ 0.37
CHRD-209ENST00000461120 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
CHRD-209ENST00000461120 PIM2Q9P1W9 311 aa17.35■□□□□ 0.37
CHRD-209ENST00000461120 SUPT16HQ9Y5B9 1047 aaKnown RBP17.35■□□□□ 0.37
CHRD-209ENST00000461120 COL11A2P13942 1736 aaPredicted RBP17.35■□□□□ 0.37
CHRD-209ENST00000461120 H0YIN7 160 aa17.34■□□□□ 0.37
CHRD-209ENST00000461120 CCDC88AQ3V6T2 1871 aa17.34■□□□□ 0.37
CHRD-209ENST00000461120 DALRD3Q5D0E6 543 aaKnown RBP17.34■□□□□ 0.37
CHRD-209ENST00000461120 SRGNP10124 158 aa17.33■□□□□ 0.36
CHRD-209ENST00000461120 HSPA8P11142 646 aaKnown RBP17.33■□□□□ 0.36
CHRD-209ENST00000461120 KCNA3P22001 575 aa17.33■□□□□ 0.36
CHRD-209ENST00000461120 MVPQ14764 893 aaKnown RBP17.33■□□□□ 0.36
CHRD-209ENST00000461120 SF3B3Q15393 1217 aaKnown RBP17.33■□□□□ 0.36
CHRD-209ENST00000461120 SUCLG2Q96I99 432 aa17.33■□□□□ 0.36
CHRD-209ENST00000461120 COG6Q9Y2V7 657 aa17.33■□□□□ 0.36
CHRD-209ENST00000461120 CENPBP07199 599 aaPredicted RBP17.32■□□□□ 0.36
CHRD-209ENST00000461120 GNAI3P08754 354 aa17.32■□□□□ 0.36
CHRD-209ENST00000461120 UBTFL1P0CB47 393 aaPredicted RBP17.32■□□□□ 0.36
CHRD-209ENST00000461120 NPR1P16066 1061 aa17.32■□□□□ 0.36
CHRD-209ENST00000461120 CTSWP56202 376 aa17.32■□□□□ 0.36
CHRD-209ENST00000461120 FOXO4P98177 505 aa17.32■□□□□ 0.36
CHRD-209ENST00000461120 MAP2K1Q02750 393 aaPredicted RBP17.32■□□□□ 0.36
CHRD-209ENST00000461120 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
CHRD-209ENST00000461120 KAZALD1Q96I82 304 aa17.32■□□□□ 0.36
CHRD-209ENST00000461120 DLEC1Q9Y238 1755 aa17.32■□□□□ 0.36
CHRD-209ENST00000461120 ZBTB7BO15156 539 aaPredicted RBP17.31■□□□□ 0.36
CHRD-209ENST00000461120 STYK1Q6J9G0 422 aa17.31■□□□□ 0.36
CHRD-209ENST00000461120 TTLL11Q8NHH1 800 aa17.31■□□□□ 0.36
CHRD-209ENST00000461120 RPGRQ92834 1020 aaKnown RBP17.31■□□□□ 0.36
CHRD-209ENST00000461120 MASTLQ96GX5 879 aa17.31■□□□□ 0.36
CHRD-209ENST00000461120 MYH3P11055 1940 aa17.31■□□□□ 0.36
CHRD-209ENST00000461120 CSF1RP07333 972 aa17.3■□□□□ 0.36
CHRD-209ENST00000461120 HOXA10P31260 410 aaPredicted RBP17.3■□□□□ 0.36
CHRD-209ENST00000461120 VEGFBP49765 207 aa17.3■□□□□ 0.36
CHRD-209ENST00000461120 CHADLQ6NUI6 762 aa17.3■□□□□ 0.36
CHRD-209ENST00000461120 ZNF622Q969S3 477 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHRD-209ENST00000461120 DDX19BQ9UMR2 479 aa17.3■□□□□ 0.36
CHRD-209ENST00000461120 HDAC5Q9UQL6 1122 aa17.3■□□□□ 0.36
CHRD-209ENST00000461120 CCDC152Q4G0S7 254 aa17.29■□□□□ 0.36
CHRD-209ENST00000461120 DPY19L2Q6NUT2 758 aa17.29■□□□□ 0.36
CHRD-209ENST00000461120 ANKRD44Q8N8A2 993 aa17.29■□□□□ 0.36
CHRD-209ENST00000461120 RBM17Q96I25 401 aaKnown RBP17.29■□□□□ 0.36
CHRD-209ENST00000461120 CCDC85AQ96PX6 553 aaPredicted RBP17.29■□□□□ 0.36
CHRD-209ENST00000461120 BEGAINQ9BUH8 593 aa17.29■□□□□ 0.36
CHRD-209ENST00000461120 BICC1Q9H694 974 aaKnown RBP17.29■□□□□ 0.36
CHRD-209ENST00000461120 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
CHRD-209ENST00000461120 RABL6Q3YEC7 729 aaPredicted RBP17.28■□□□□ 0.36
CHRD-209ENST00000461120 LMBR1LQ6UX01 489 aa17.28■□□□□ 0.36
CHRD-209ENST00000461120 DDX46Q7L014 1031 aaKnown RBP17.28■□□□□ 0.36
CHRD-209ENST00000461120 CNKSR1Q969H4 720 aa17.28■□□□□ 0.36
CHRD-209ENST00000461120 CRAMP1Q96RY5 1269 aa17.28■□□□□ 0.36
CHRD-209ENST00000461120 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
CHRD-209ENST00000461120 GNAI2P04899 355 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms