RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.29■□□□□ 0.52
SSR4-206ENST00000460616 V9GYY5 206 aaPredicted RBP18.29■□□□□ 0.52
SSR4-206ENST00000460616 ST3GAL1Q11201 340 aa18.28■□□□□ 0.52
SSR4-206ENST00000460616 RBM43Q6ZSC3 357 aaKnown RBP18.28■□□□□ 0.52
SSR4-206ENST00000460616 SSH3Q8TE77 659 aa18.28■□□□□ 0.52
SSR4-206ENST00000460616 CPDO75976 1380 aa18.28■□□□□ 0.52
SSR4-206ENST00000460616 NUTM2BA6NNL0 878 aaPredicted RBP18.28■□□□□ 0.52
SSR4-206ENST00000460616 NUTM2EB1AL46 878 aaPredicted RBP18.28■□□□□ 0.52
SSR4-206ENST00000460616 CDC25BP30305 580 aa18.28■□□□□ 0.52
SSR4-206ENST00000460616 CDC37L1Q7L3B6 337 aa18.28■□□□□ 0.52
SSR4-206ENST00000460616 NUTM2AQ8IVF1 878 aaPredicted RBP18.28■□□□□ 0.52
SSR4-206ENST00000460616 RHPN1Q8TCX5 695 aa18.28■□□□□ 0.52
SSR4-206ENST00000460616 SPATA32Q96LK8 384 aa18.28■□□□□ 0.52
SSR4-206ENST00000460616 TM6SF1Q9BZW5 370 aa18.28■□□□□ 0.52
SSR4-206ENST00000460616 USP44Q9H0E7 712 aa18.28■□□□□ 0.52
SSR4-206ENST00000460616 DNAJC25Q9H1X3 360 aa18.28■□□□□ 0.52
SSR4-206ENST00000460616 CLSTN2Q9H4D0 955 aa18.28■□□□□ 0.52
SSR4-206ENST00000460616 UBTFL1P0CB47 393 aaPredicted RBP18.27■□□□□ 0.52
SSR4-206ENST00000460616 PRPF40BQ6NWY9 871 aaKnown RBP18.27■□□□□ 0.52
SSR4-206ENST00000460616 PRDM11Q9NQV5 511 aa18.27■□□□□ 0.52
SSR4-206ENST00000460616 TFIP11Q9UBB9 837 aaKnown RBP18.27■□□□□ 0.52
SSR4-206ENST00000460616 CAMTA1Q9Y6Y1 1673 aa18.27■□□□□ 0.52
SSR4-206ENST00000460616 USP27XA6NNY8 438 aa18.27■□□□□ 0.51
SSR4-206ENST00000460616 NEMFO60524 1076 aa18.27■□□□□ 0.51
SSR4-206ENST00000460616 RBM6P78332 1123 aaKnown RBP18.27■□□□□ 0.51
SSR4-206ENST00000460616 FBXO38Q6PIJ6 1188 aa18.27■□□□□ 0.51
SSR4-206ENST00000460616 ERO1AQ96HE7 468 aa18.27■□□□□ 0.51
SSR4-206ENST00000460616 VGLL3A8MV65 326 aa18.26■□□□□ 0.51
SSR4-206ENST00000460616 PDCP20941 246 aa18.26■□□□□ 0.51
SSR4-206ENST00000460616 NYAP1Q6ZVC0 841 aa18.26■□□□□ 0.51
SSR4-206ENST00000460616 NAP1L2Q9ULW6 460 aaPredicted RBP18.26■□□□□ 0.51
SSR4-206ENST00000460616 ERICH4A6NGS2 130 aa18.26■□□□□ 0.51
SSR4-206ENST00000460616 ADAMTS2O95450 1211 aa18.26■□□□□ 0.51
SSR4-206ENST00000460616 FAM193AP78312 1265 aa18.26■□□□□ 0.51
SSR4-206ENST00000460616 PTH1RQ03431 593 aa18.26■□□□□ 0.51
SSR4-206ENST00000460616 CCDC30Q5VVM6 783 aa18.26■□□□□ 0.51
SSR4-206ENST00000460616 USHBP1Q8N6Y0 703 aa18.26■□□□□ 0.51
SSR4-206ENST00000460616 RUFY2Q8WXA3 655 aa18.26■□□□□ 0.51
SSR4-206ENST00000460616 CALCOCO1Q9P1Z2 691 aa18.26■□□□□ 0.51
SSR4-206ENST00000460616 CAVIN2O95810 425 aa18.25■□□□□ 0.51
SSR4-206ENST00000460616 SKILP12757 684 aa18.25■□□□□ 0.51
SSR4-206ENST00000460616 ELF2Q15723 593 aa18.25■□□□□ 0.51
SSR4-206ENST00000460616 PPP1R42Q7Z4L9 355 aa18.25■□□□□ 0.51
SSR4-206ENST00000460616 NECTIN2Q92692 538 aa18.25■□□□□ 0.51
SSR4-206ENST00000460616 TPCN1Q9ULQ1 816 aa18.25■□□□□ 0.51
SSR4-206ENST00000460616 GOLGA6L19H0YKK7 550 aa18.25■□□□□ 0.51
SSR4-206ENST00000460616 NR1I2O75469 434 aa18.25■□□□□ 0.51
SSR4-206ENST00000460616 ARID5BQ14865 1188 aa18.25■□□□□ 0.51
SSR4-206ENST00000460616 SLFNL1Q499Z3 407 aa18.25■□□□□ 0.51
SSR4-206ENST00000460616 DDX54Q8TDD1 881 aaKnown RBP18.25■□□□□ 0.51
SSR4-206ENST00000460616 KIF1BPQ96EK5 621 aa18.25■□□□□ 0.51
SSR4-206ENST00000460616 EYA1Q99502 592 aa18.25■□□□□ 0.51
SSR4-206ENST00000460616 JCADQ9P266 1359 aa18.24■□□□□ 0.51
SSR4-206ENST00000460616 ANKRD24Q8TF21 1146 aa18.24■□□□□ 0.51
SSR4-206ENST00000460616 LEO1Q8WVC0 666 aaPredicted RBP18.24■□□□□ 0.51
SSR4-206ENST00000460616 PLCH1Q4KWH8 1693 aa18.24■□□□□ 0.51
SSR4-206ENST00000460616 SLU7O95391 586 aaKnown RBP18.23■□□□□ 0.51
SSR4-206ENST00000460616 ZKSCAN1P17029 563 aaPredicted RBP18.23■□□□□ 0.51
SSR4-206ENST00000460616 ERBB3P21860 1342 aa18.23■□□□□ 0.51
SSR4-206ENST00000460616 NBPF6Q5VWK0 638 aa18.23■□□□□ 0.51
SSR4-206ENST00000460616 BICD2Q8TD16 824 aa18.23■□□□□ 0.51
SSR4-206ENST00000460616 KCNB2Q92953 911 aa18.23■□□□□ 0.51
SSR4-206ENST00000460616 MRFAP1L1Q96HT8 127 aa18.23■□□□□ 0.51
SSR4-206ENST00000460616 NBPF4Q96M43 638 aa18.23■□□□□ 0.51
SSR4-206ENST00000460616 TRMT1Q9NXH9 659 aaKnown RBP18.23■□□□□ 0.51
SSR4-206ENST00000460616 LRP6O75581 1613 aa18.23■□□□□ 0.51
SSR4-206ENST00000460616 MTHFSDQ2M296 383 aaKnown RBP18.22■□□□□ 0.51
SSR4-206ENST00000460616 SARM1Q6SZW1 724 aa18.22■□□□□ 0.51
SSR4-206ENST00000460616 ST7Q9NRC1 585 aa18.22■□□□□ 0.51
SSR4-206ENST00000460616 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
SSR4-206ENST00000460616 POLA2Q14181 598 aa18.22■□□□□ 0.51
SSR4-206ENST00000460616 CREBRFQ8IUR6 639 aa18.22■□□□□ 0.51
SSR4-206ENST00000460616 ABCC6O95255 1503 aa18.21■□□□□ 0.51
SSR4-206ENST00000460616 IGSF1Q8N6C5 1336 aa18.21■□□□□ 0.51
SSR4-206ENST00000460616 SRGAP3O43295 1099 aa18.21■□□□□ 0.51
SSR4-206ENST00000460616 BMS1Q14692 1282 aaKnown RBP18.21■□□□□ 0.51
SSR4-206ENST00000460616 IQCB1Q15051 598 aa18.21■□□□□ 0.51
SSR4-206ENST00000460616 NECTIN1Q15223 517 aa18.21■□□□□ 0.51
SSR4-206ENST00000460616 ZNF446Q9NWS9 450 aa18.21■□□□□ 0.51
SSR4-206ENST00000460616 COL5A2P05997 1499 aaPredicted RBP18.21■□□□□ 0.51
SSR4-206ENST00000460616 NPHP1O15259 732 aa18.21■□□□□ 0.5
SSR4-206ENST00000460616 GLRX3O76003 335 aaKnown RBP18.21■□□□□ 0.5
SSR4-206ENST00000460616 RNF20Q5VTR2 975 aa18.21■□□□□ 0.5
SSR4-206ENST00000460616 DNAJC2Q99543 621 aaKnown RBP18.21■□□□□ 0.5
SSR4-206ENST00000460616 NOL10Q9BSC4 688 aaKnown RBP18.21■□□□□ 0.5
SSR4-206ENST00000460616 CCDC69A6NI79 296 aa18.2■□□□□ 0.5
SSR4-206ENST00000460616 CCAR2Q8N163 923 aaKnown RBP18.2■□□□□ 0.5
SSR4-206ENST00000460616 PGBD1Q96JS3 809 aa18.2■□□□□ 0.5
SSR4-206ENST00000460616 LARP1Q6PKG0 1096 aaKnown RBP18.2■□□□□ 0.5
SSR4-206ENST00000460616 FILIP1Q7Z7B0 1213 aa18.2■□□□□ 0.5
SSR4-206ENST00000460616 IPO4Q8TEX9 1081 aaKnown RBP18.2■□□□□ 0.5
SSR4-206ENST00000460616 USP16Q9Y5T5 823 aa18.2■□□□□ 0.5
SSR4-206ENST00000460616 FAM208AQ9UK61 1670 aaKnown RBP18.19■□□□□ 0.5
SSR4-206ENST00000460616 TULP2O00295 520 aa18.18■□□□□ 0.5
SSR4-206ENST00000460616 CCZ1BP86790 482 aa18.18■□□□□ 0.5
SSR4-206ENST00000460616 CCZ1P86791 482 aaPredicted RBP18.18■□□□□ 0.5
SSR4-206ENST00000460616 SLC20A2Q08357 652 aa18.18■□□□□ 0.5
SSR4-206ENST00000460616 STRN4Q9NRL3 753 aa18.18■□□□□ 0.5
SSR4-206ENST00000460616 BTG4Q9NY30 223 aa18.18■□□□□ 0.5
SSR4-206ENST00000460616 TTC41PQ6P2S7 1318 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms