RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SP8Q8IXZ3 490 aa24.32■■□□□ 1.48
COL5A1-203ENST00000460264 DUOX1Q9NRD9 1551 aa24.32■■□□□ 1.48
COL5A1-203ENST00000460264 PI4KAP2A4QPH2 592 aa24.31■■□□□ 1.48
COL5A1-203ENST00000460264 LARGE2Q8N3Y3 721 aa24.31■■□□□ 1.48
COL5A1-203ENST00000460264 PI4KAP1Q8N8J0 262 aa24.31■■□□□ 1.48
COL5A1-203ENST00000460264 CWC25Q9NXE8 425 aaPredicted RBP24.31■■□□□ 1.48
COL5A1-203ENST00000460264 MYH3P11055 1940 aa24.3■■□□□ 1.48
COL5A1-203ENST00000460264 IQCA1LA6NCM1 817 aa24.3■■□□□ 1.48
COL5A1-203ENST00000460264 G2E3Q7L622 706 aa24.3■■□□□ 1.48
COL5A1-203ENST00000460264 TMC4Q7Z404 712 aa24.3■■□□□ 1.48
COL5A1-203ENST00000460264 RTFDC1Q9BY42 306 aaPredicted RBP24.3■■□□□ 1.48
COL5A1-203ENST00000460264 SPINK5Q9NQ38 1064 aaPredicted RBP24.3■■□□□ 1.48
COL5A1-203ENST00000460264 LTBP1Q14766 1721 aa24.3■■□□□ 1.48
COL5A1-203ENST00000460264 SLC4A2P04920 1241 aa24.29■■□□□ 1.48
COL5A1-203ENST00000460264 PCCAP05165 728 aaPredicted RBP24.29■■□□□ 1.48
COL5A1-203ENST00000460264 DPP8Q6V1X1 898 aaPredicted RBP24.29■■□□□ 1.48
COL5A1-203ENST00000460264 PPIP5K2O43314 1243 aa24.28■■□□□ 1.48
COL5A1-203ENST00000460264 EXOSC9Q06265 439 aaKnown RBP24.28■■□□□ 1.48
COL5A1-203ENST00000460264 GPC2Q8N158 579 aa24.28■■□□□ 1.48
COL5A1-203ENST00000460264 MPNDQ8N594 471 aa24.28■■□□□ 1.48
COL5A1-203ENST00000460264 SUPT20HQ8NEM7 779 aa24.28■■□□□ 1.48
COL5A1-203ENST00000460264 CELF1Q92879 486 aaKnown RBP24.28■■□□□ 1.48
COL5A1-203ENST00000460264 ADAMTSL1Q8N6G6 1762 aa24.28■■□□□ 1.48
COL5A1-203ENST00000460264 VAMP4O75379 141 aa24.27■■□□□ 1.48
COL5A1-203ENST00000460264 IGKV5-2P06315 115 aa24.27■■□□□ 1.48
COL5A1-203ENST00000460264 POTEIP0CG38 1075 aa24.27■■□□□ 1.48
COL5A1-203ENST00000460264 POTEJP0CG39 1038 aa24.27■■□□□ 1.48
COL5A1-203ENST00000460264 HSP90B1P14625 803 aaKnown RBP24.27■■□□□ 1.48
COL5A1-203ENST00000460264 AOC3Q16853 763 aa24.27■■□□□ 1.48
COL5A1-203ENST00000460264 NIM1KQ8IY84 436 aa24.27■■□□□ 1.48
COL5A1-203ENST00000460264 VPS33BQ9H267 617 aa24.27■■□□□ 1.48
COL5A1-203ENST00000460264 TAF1DQ9H5J8 278 aaPredicted RBP24.27■■□□□ 1.48
COL5A1-203ENST00000460264 EIF6P56537 245 aaKnown RBP24.26■■□□□ 1.47
COL5A1-203ENST00000460264 MYH16Q9H6N6 1097 aa24.26■■□□□ 1.47
COL5A1-203ENST00000460264 NEXNQ0ZGT2 675 aa24.25■■□□□ 1.47
COL5A1-203ENST00000460264 FLIIQ13045 1269 aa24.25■■□□□ 1.47
COL5A1-203ENST00000460264 JARID2Q92833 1246 aaPredicted RBP24.25■■□□□ 1.47
COL5A1-203ENST00000460264 HACL1Q9UJ83 578 aa24.25■■□□□ 1.47
COL5A1-203ENST00000460264 ZNF521Q96K83 1311 aa24.25■■□□□ 1.47
COL5A1-203ENST00000460264 PDE8AO60658 829 aa24.24■■□□□ 1.47
COL5A1-203ENST00000460264 HTRA3P83110 453 aa24.24■■□□□ 1.47
COL5A1-203ENST00000460264 CHADLQ6NUI6 762 aa24.24■■□□□ 1.47
COL5A1-203ENST00000460264 DNAJC5GQ8N7S2 189 aa24.24■■□□□ 1.47
COL5A1-203ENST00000460264 CDHR2Q9BYE9 1310 aa24.24■■□□□ 1.47
COL5A1-203ENST00000460264 KIAA2012Q0VF49 1180 aa24.23■■□□□ 1.47
COL5A1-203ENST00000460264 CWF19L2Q2TBE0 894 aaKnown RBP24.23■■□□□ 1.47
COL5A1-203ENST00000460264 GJA3Q9Y6H8 435 aa24.23■■□□□ 1.47
COL5A1-203ENST00000460264 SPEF2Q9C093 1822 aa24.22■■□□□ 1.47
COL5A1-203ENST00000460264 NEURL1BA8MQ27 555 aa24.22■■□□□ 1.47
COL5A1-203ENST00000460264 EPHX2P34913 555 aa24.22■■□□□ 1.47
COL5A1-203ENST00000460264 CCDC152Q4G0S7 254 aa24.22■■□□□ 1.47
COL5A1-203ENST00000460264 LDHDQ86WU2 507 aa24.22■■□□□ 1.47
COL5A1-203ENST00000460264 RPS8P62241 208 aaKnown RBP24.21■■□□□ 1.47
COL5A1-203ENST00000460264 FKBP5Q13451 457 aaPredicted RBP24.21■■□□□ 1.47
COL5A1-203ENST00000460264 SEC31BQ9NQW1 1179 aa24.21■■□□□ 1.47
COL5A1-203ENST00000460264 ZNRF3Q9ULT6 936 aa24.21■■□□□ 1.47
COL5A1-203ENST00000460264 SCNN1DP51172 638 aa24.19■■□□□ 1.46
COL5A1-203ENST00000460264 EAPPQ56P03 285 aaPredicted RBP24.19■■□□□ 1.46
COL5A1-203ENST00000460264 DNAAF4Q8WXU2 420 aa24.19■■□□□ 1.46
COL5A1-203ENST00000460264 NSFL1CQ9UNZ2 370 aaKnown RBP24.19■■□□□ 1.46
COL5A1-203ENST00000460264 CTSWP56202 376 aa24.18■■□□□ 1.46
COL5A1-203ENST00000460264 GPSM2P81274 684 aa24.18■■□□□ 1.46
COL5A1-203ENST00000460264 CXCL9Q07325 125 aa24.18■■□□□ 1.46
COL5A1-203ENST00000460264 CCDC85AQ96PX6 553 aaPredicted RBP24.18■■□□□ 1.46
COL5A1-203ENST00000460264 LMOD1P29536 600 aaPredicted RBP24.17■■□□□ 1.46
COL5A1-203ENST00000460264 UBE3BQ7Z3V4 1068 aa24.17■■□□□ 1.46
COL5A1-203ENST00000460264 PNMA8AQ86V59 439 aaPredicted RBP24.17■■□□□ 1.46
COL5A1-203ENST00000460264 H7C1W4 665 aa24.16■■□□□ 1.46
COL5A1-203ENST00000460264 GCKRQ14397 625 aa24.16■■□□□ 1.46
COL5A1-203ENST00000460264 POLLQ9UGP5 575 aa24.16■■□□□ 1.46
COL5A1-203ENST00000460264 WASHC4Q2M389 1173 aa24.15■■□□□ 1.46
COL5A1-203ENST00000460264 LINS1Q8NG48 757 aa24.15■■□□□ 1.46
COL5A1-203ENST00000460264 TTLL11Q8NHH1 800 aa24.15■■□□□ 1.46
COL5A1-203ENST00000460264 KLRG1Q96E93 195 aa24.15■■□□□ 1.46
COL5A1-203ENST00000460264 RTL9Q8NET4 1388 aa24.15■■□□□ 1.46
COL5A1-203ENST00000460264 YDJCA8MPS7 323 aa24.14■■□□□ 1.45
COL5A1-203ENST00000460264 C6orf229H3BNL8 230 aa24.14■■□□□ 1.45
COL5A1-203ENST00000460264 EPS15P42566 896 aa24.14■■□□□ 1.45
COL5A1-203ENST00000460264 PASKQ96RG2 1323 aa24.13■■□□□ 1.45
COL5A1-203ENST00000460264 RAD17O75943 681 aa24.13■■□□□ 1.45
COL5A1-203ENST00000460264 CIAPIN1Q6FI81 312 aa24.13■■□□□ 1.45
COL5A1-203ENST00000460264 ANKRD18AQ8IVF6 992 aa24.13■■□□□ 1.45
COL5A1-203ENST00000460264 TBC1D16Q8TBP0 767 aa24.13■■□□□ 1.45
COL5A1-203ENST00000460264 PODXL2Q9NZ53 605 aa24.13■■□□□ 1.45
COL5A1-203ENST00000460264 CLEC11AQ9Y240 323 aa24.13■■□□□ 1.45
COL5A1-203ENST00000460264 F6X3S4 739 aa24.12■■□□□ 1.45
COL5A1-203ENST00000460264 CASP7P55210 303 aa24.12■■□□□ 1.45
COL5A1-203ENST00000460264 CDC5LQ99459 802 aaKnown RBP24.12■■□□□ 1.45
COL5A1-203ENST00000460264 EYA3Q99504 573 aa24.12■■□□□ 1.45
COL5A1-203ENST00000460264 GREM2Q9H772 168 aa24.12■■□□□ 1.45
COL5A1-203ENST00000460264 GPRC5DQ9NZD1 345 aa24.12■■□□□ 1.45
COL5A1-203ENST00000460264 SCN9AQ15858 1988 aa24.12■■□□□ 1.45
COL5A1-203ENST00000460264 CCER2I3L3R5 266 aa24.11■■□□□ 1.45
COL5A1-203ENST00000460264 ITGBL1O95965 494 aaPredicted RBP24.11■■□□□ 1.45
COL5A1-203ENST00000460264 TNIP1Q15025 636 aa24.11■■□□□ 1.45
COL5A1-203ENST00000460264 GPR101Q96P66 508 aaPredicted RBP24.11■■□□□ 1.45
COL5A1-203ENST00000460264 PLA2G12BQ9BX93 195 aa24.11■■□□□ 1.45
COL5A1-203ENST00000460264 ANKIB1Q9P2G1 1089 aa24.11■■□□□ 1.45
COL5A1-203ENST00000460264 E9PSI1 815 aa24.1■■□□□ 1.45
COL5A1-203ENST00000460264 RIMBP2O15034 1052 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms