RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CCDC186Q7Z3E2 898 aa23.21■■□□□ 1.31
CNEP1R1-203ENST00000458059 NFATC2IPQ8NCF5 419 aa23.21■■□□□ 1.31
CNEP1R1-203ENST00000458059 TRIM5Q9C035 493 aa23.21■■□□□ 1.31
CNEP1R1-203ENST00000458059 DNAJC25Q9H1X3 360 aa23.21■■□□□ 1.31
CNEP1R1-203ENST00000458059 UBE3BQ7Z3V4 1068 aa23.21■■□□□ 1.31
CNEP1R1-203ENST00000458059 BRF1Q92994 677 aa23.21■■□□□ 1.31
CNEP1R1-203ENST00000458059 MARF1Q9Y4F3 1742 aaKnown RBP23.21■■□□□ 1.31
CNEP1R1-203ENST00000458059 FAM200AQ8TCP9 573 aa23.2■■□□□ 1.3
CNEP1R1-203ENST00000458059 ERCC4Q92889 916 aaPredicted RBP23.2■■□□□ 1.3
CNEP1R1-203ENST00000458059 CBX8Q9HC52 389 aa23.2■■□□□ 1.3
CNEP1R1-203ENST00000458059 H3BQV1 296 aa23.2■■□□□ 1.3
CNEP1R1-203ENST00000458059 GUCY1B3Q02153 619 aa23.2■■□□□ 1.3
CNEP1R1-203ENST00000458059 IFFO2Q5TF58 517 aa23.2■■□□□ 1.3
CNEP1R1-203ENST00000458059 DBNLQ9UJU6 430 aaKnown RBP23.2■■□□□ 1.3
CNEP1R1-203ENST00000458059 CBX1P83916 185 aa23.19■■□□□ 1.3
CNEP1R1-203ENST00000458059 Q6ZUG5 572 aa23.19■■□□□ 1.3
CNEP1R1-203ENST00000458059 LEO1Q8WVC0 666 aaPredicted RBP23.19■■□□□ 1.3
CNEP1R1-203ENST00000458059 NEXNQ0ZGT2 675 aa23.19■■□□□ 1.3
CNEP1R1-203ENST00000458059 PDIA6Q15084 440 aa23.19■■□□□ 1.3
CNEP1R1-203ENST00000458059 CHST3Q7LGC8 479 aa23.19■■□□□ 1.3
CNEP1R1-203ENST00000458059 KIAA1524Q8TCG1 905 aa23.19■■□□□ 1.3
CNEP1R1-203ENST00000458059 MAP7D2Q96T17 732 aa23.19■■□□□ 1.3
CNEP1R1-203ENST00000458059 NLRP2Q9NX02 1062 aa23.19■■□□□ 1.3
CNEP1R1-203ENST00000458059 C16orf45Q96MC5 204 aaPredicted RBP23.19■■□□□ 1.3
CNEP1R1-203ENST00000458059 DBNDD2Q9BQY9 259 aa23.19■■□□□ 1.3
CNEP1R1-203ENST00000458059 DDX21Q9NR30 783 aaKnown RBP eCLIP23.19■■□□□ 1.3
CNEP1R1-203ENST00000458059 KIF3AQ9Y496 699 aa23.18■■□□□ 1.3
CNEP1R1-203ENST00000458059 A0A0G2JLW4 131 aa23.18■■□□□ 1.3
CNEP1R1-203ENST00000458059 RIOK3O14730 519 aaKnown RBP23.18■■□□□ 1.3
CNEP1R1-203ENST00000458059 TAF5LO75529 589 aa23.18■■□□□ 1.3
CNEP1R1-203ENST00000458059 AMOTQ4VCS5 1084 aa23.18■■□□□ 1.3
CNEP1R1-203ENST00000458059 KCNH5Q8NCM2 988 aa23.18■■□□□ 1.3
CNEP1R1-203ENST00000458059 PGBD1Q96JS3 809 aa23.18■■□□□ 1.3
CNEP1R1-203ENST00000458059 COL15A1P39059 1388 aa23.18■■□□□ 1.3
CNEP1R1-203ENST00000458059 NEURL1BA8MQ27 555 aa23.17■■□□□ 1.3
CNEP1R1-203ENST00000458059 CCT2P78371 535 aaKnown RBP23.17■■□□□ 1.3
CNEP1R1-203ENST00000458059 SPDYE4A6NLX3 237 aa23.17■■□□□ 1.3
CNEP1R1-203ENST00000458059 PDCP20941 246 aa23.17■■□□□ 1.3
CNEP1R1-203ENST00000458059 KCNB2Q92953 911 aa23.17■■□□□ 1.3
CNEP1R1-203ENST00000458059 USP16Q9Y5T5 823 aa23.17■■□□□ 1.3
CNEP1R1-203ENST00000458059 NPHP4O75161 1426 aaPredicted RBP23.16■■□□□ 1.3
CNEP1R1-203ENST00000458059 NEUROD6Q96NK8 337 aa23.16■■□□□ 1.3
CNEP1R1-203ENST00000458059 BCL2L12Q9HB09 334 aa23.16■■□□□ 1.3
CNEP1R1-203ENST00000458059 ANKARQ7Z5J8 1434 aa23.16■■□□□ 1.3
CNEP1R1-203ENST00000458059 HIP1O00291 1037 aa23.16■■□□□ 1.3
CNEP1R1-203ENST00000458059 GCKRQ14397 625 aa23.16■■□□□ 1.3
CNEP1R1-203ENST00000458059 NEK1Q96PY6 1258 aa23.16■■□□□ 1.3
CNEP1R1-203ENST00000458059 DDX17Q92841 729 aaKnown RBP23.15■■□□□ 1.3
CNEP1R1-203ENST00000458059 ZNF496Q96IT1 587 aaPredicted RBP23.15■■□□□ 1.3
CNEP1R1-203ENST00000458059 CHMP4AQ9BY43 222 aa23.15■■□□□ 1.3
CNEP1R1-203ENST00000458059 KIF13AQ9H1H9 1805 aa23.15■■□□□ 1.3
CNEP1R1-203ENST00000458059 ZNF790Q6PG37 636 aa23.15■■□□□ 1.3
CNEP1R1-203ENST00000458059 PRIMPOLQ96LW4 560 aa23.15■■□□□ 1.3
CNEP1R1-203ENST00000458059 N4BP2Q86UW6 1770 aaPredicted RBP23.14■■□□□ 1.3
CNEP1R1-203ENST00000458059 ARHGEF25Q86VW2 580 aa23.14■■□□□ 1.3
CNEP1R1-203ENST00000458059 NCOA5Q9HCD5 579 aaKnown RBP23.14■■□□□ 1.3
CNEP1R1-203ENST00000458059 GOLGA6L6A8MZA4 724 aa23.14■■□□□ 1.29
CNEP1R1-203ENST00000458059 CYP21A2P08686 494 aa23.14■■□□□ 1.29
CNEP1R1-203ENST00000458059 ZNF165P49910 485 aa23.14■■□□□ 1.29
CNEP1R1-203ENST00000458059 HMGN5P82970 282 aaKnown RBP23.14■■□□□ 1.29
CNEP1R1-203ENST00000458059 PPP4R3BQ5MIZ7 849 aa23.14■■□□□ 1.29
CNEP1R1-203ENST00000458059 SPTLC3Q9NUV7 552 aa23.14■■□□□ 1.29
CNEP1R1-203ENST00000458059 SCAND2PQ9GZW5 306 aaPredicted RBP23.13■■□□□ 1.29
CNEP1R1-203ENST00000458059 ANKRD1Q15327 319 aa23.13■■□□□ 1.29
CNEP1R1-203ENST00000458059 ZNF592Q92610 1267 aa23.13■■□□□ 1.29
CNEP1R1-203ENST00000458059 CHAF1AQ13111 956 aaPredicted RBP23.13■■□□□ 1.29
CNEP1R1-203ENST00000458059 ARID5BQ14865 1188 aa23.13■■□□□ 1.29
CNEP1R1-203ENST00000458059 TNNI3KQ59H18 835 aa23.13■■□□□ 1.29
CNEP1R1-203ENST00000458059 FPGT-TNNI3KV9GXZ4 949 aa23.13■■□□□ 1.29
CNEP1R1-203ENST00000458059 HDAC5Q9UQL6 1122 aa23.12■■□□□ 1.29
CNEP1R1-203ENST00000458059 APOBRQ0VD83 1088 aa23.12■■□□□ 1.29
CNEP1R1-203ENST00000458059 RAB11FIP4Q86YS3 637 aa23.12■■□□□ 1.29
CNEP1R1-203ENST00000458059 MED23Q9ULK4 1368 aa23.12■■□□□ 1.29
CNEP1R1-203ENST00000458059 ARHGAP23Q9P227 1491 aa23.12■■□□□ 1.29
CNEP1R1-203ENST00000458059 KDM3BQ7LBC6 1761 aa23.12■■□□□ 1.29
CNEP1R1-203ENST00000458059 ANKRD13DQ6ZTN6 518 aa23.11■■□□□ 1.29
CNEP1R1-203ENST00000458059 A0A087WZG4 1122 aa23.11■■□□□ 1.29
CNEP1R1-203ENST00000458059 GOLIM4O00461 696 aa23.11■■□□□ 1.29
CNEP1R1-203ENST00000458059 SCRN1Q12765 414 aa23.11■■□□□ 1.29
CNEP1R1-203ENST00000458059 NAA30Q147X3 362 aaPredicted RBP23.11■■□□□ 1.29
CNEP1R1-203ENST00000458059 GTF3C6Q969F1 213 aa23.11■■□□□ 1.29
CNEP1R1-203ENST00000458059 NPHP3Q7Z494 1330 aa23.11■■□□□ 1.29
CNEP1R1-203ENST00000458059 CSB-PGBD3P0DP91 1061 aa23.1■■□□□ 1.29
CNEP1R1-203ENST00000458059 STOX1Q6ZVD7 989 aa23.1■■□□□ 1.29
CNEP1R1-203ENST00000458059 RAPGEF4Q8WZA2 1011 aa23.1■■□□□ 1.29
CNEP1R1-203ENST00000458059 SLIT1O75093 1534 aa23.1■■□□□ 1.29
CNEP1R1-203ENST00000458059 TIMM10P62072 90 aa23.1■■□□□ 1.29
CNEP1R1-203ENST00000458059 PTPN12Q05209 780 aaKnown RBP23.1■■□□□ 1.29
CNEP1R1-203ENST00000458059 CABLES1Q8TDN4 633 aa23.1■■□□□ 1.29
CNEP1R1-203ENST00000458059 ZHX1Q9UKY1 873 aaPredicted RBP23.1■■□□□ 1.29
CNEP1R1-203ENST00000458059 NFAT5O94916 1531 aa23.09■■□□□ 1.29
CNEP1R1-203ENST00000458059 MED1Q15648 1581 aaPredicted RBP23.09■■□□□ 1.29
CNEP1R1-203ENST00000458059 ATP2B3Q16720 1220 aa23.09■■□□□ 1.29
CNEP1R1-203ENST00000458059 CCDC94Q9BW85 323 aaPredicted RBP23.09■■□□□ 1.29
CNEP1R1-203ENST00000458059 CLSTN2Q9H4D0 955 aa23.09■■□□□ 1.29
CNEP1R1-203ENST00000458059 CCDC144BQ3MJ40 725 aa23.09■■□□□ 1.29
CNEP1R1-203ENST00000458059 CCDC144CPQ8IYA2 1237 aa23.09■■□□□ 1.29
CNEP1R1-203ENST00000458059 ZNF609O15014 1411 aa23.08■■□□□ 1.29
CNEP1R1-203ENST00000458059 IGSF3O75054 1194 aa23.08■■□□□ 1.29
CNEP1R1-203ENST00000458059 C11orf57Q6ZUT1 292 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms