RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ANKRD7Q92527 254 aa16.13■□□□□ 0.17
TOP3B-213ENST00000457179 EAF2Q96CJ1 260 aaPredicted RBP16.13■□□□□ 0.17
TOP3B-213ENST00000457179 ZNF594Q96JF6 807 aaPredicted RBP16.13■□□□□ 0.17
TOP3B-213ENST00000457179 TRERF1Q96PN7 1200 aa16.13■□□□□ 0.17
TOP3B-213ENST00000457179 METTL22Q9BUU2 404 aaPredicted RBP16.13■□□□□ 0.17
TOP3B-213ENST00000457179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.13■□□□□ 0.174e-7■■■□□ 15.1
TOP3B-213ENST00000457179 SLIT3O75094 1523 aa16.13■□□□□ 0.17
TOP3B-213ENST00000457179 SYNE4Q8N205 404 aa16.13■□□□□ 0.17
TOP3B-213ENST00000457179 DNAJC2Q99543 621 aaKnown RBP16.13■□□□□ 0.17
TOP3B-213ENST00000457179 OGFRQ9NZT2 677 aa16.13■□□□□ 0.17
TOP3B-213ENST00000457179 ALDH1L1O75891 902 aa16.13■□□□□ 0.17
TOP3B-213ENST00000457179 CHGBP05060 677 aa16.13■□□□□ 0.17
TOP3B-213ENST00000457179 CAMTA1Q9Y6Y1 1673 aa16.12■□□□□ 0.17
TOP3B-213ENST00000457179 PIGBQ92521 554 aa16.12■□□□□ 0.17
TOP3B-213ENST00000457179 CARD10Q9BWT7 1032 aa16.12■□□□□ 0.17
TOP3B-213ENST00000457179 POLA2Q14181 598 aa16.12■□□□□ 0.17
TOP3B-213ENST00000457179 FAM89AQ96GI7 184 aa16.12■□□□□ 0.17
TOP3B-213ENST00000457179 SASH1O94885 1247 aa16.11■□□□□ 0.17
TOP3B-213ENST00000457179 NCBP1Q09161 790 aaKnown RBP16.11■□□□□ 0.17
TOP3B-213ENST00000457179 PAXIP1Q6ZW49 1069 aaPredicted RBP16.11■□□□□ 0.17
TOP3B-213ENST00000457179 FEZ1Q99689 392 aa16.11■□□□□ 0.17
TOP3B-213ENST00000457179 TBC1D2BQ9UPU7 963 aa16.11■□□□□ 0.17
TOP3B-213ENST00000457179 RAB11FIP3O75154 756 aa16.11■□□□□ 0.17
TOP3B-213ENST00000457179 FAM182BQ5T319 152 aa16.11■□□□□ 0.17
TOP3B-213ENST00000457179 EXOC5O00471 708 aa16.1■□□□□ 0.17
TOP3B-213ENST00000457179 HSP90AB4PQ58FF6 505 aa16.1■□□□□ 0.17
TOP3B-213ENST00000457179 USP48Q86UV5 1035 aa16.1■□□□□ 0.17
TOP3B-213ENST00000457179 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
TOP3B-213ENST00000457179 FAM184AQ8NB25 1140 aa16.1■□□□□ 0.17
TOP3B-213ENST00000457179 PI4K2BQ8TCG2 481 aa16.1■□□□□ 0.17
TOP3B-213ENST00000457179 C16orf45Q96MC5 204 aaPredicted RBP16.1■□□□□ 0.17
TOP3B-213ENST00000457179 KCNF1Q9H3M0 494 aa16.1■□□□□ 0.17
TOP3B-213ENST00000457179 EP400Q96L91 3159 aa16.1■□□□□ 0.17
TOP3B-213ENST00000457179 KIAA1524Q8TCG1 905 aa16.1■□□□□ 0.17
TOP3B-213ENST00000457179 STAP2Q9UGK3 403 aa16.1■□□□□ 0.17
TOP3B-213ENST00000457179 TFCP2Q12800 502 aa16.09■□□□□ 0.17
TOP3B-213ENST00000457179 DCCP43146 1447 aa16.09■□□□□ 0.17
TOP3B-213ENST00000457179 TIMM10P62072 90 aa16.09■□□□□ 0.17
TOP3B-213ENST00000457179 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
TOP3B-213ENST00000457179 FSD1Q9BTV5 496 aa16.09■□□□□ 0.17
TOP3B-213ENST00000457179 ECHDC1Q9NTX5 307 aa16.09■□□□□ 0.17
TOP3B-213ENST00000457179 BRD1O95696 1058 aa16.08■□□□□ 0.17
TOP3B-213ENST00000457179 TCEANC2Q96MN5 208 aa16.08■□□□□ 0.17
TOP3B-213ENST00000457179 SLFN14P0C7P3 912 aa16.08■□□□□ 0.16
TOP3B-213ENST00000457179 SLFNL1Q499Z3 407 aa16.08■□□□□ 0.16
TOP3B-213ENST00000457179 SMIM5Q71RC9 77 aa16.08■□□□□ 0.16
TOP3B-213ENST00000457179 FAM227BQ96M60 508 aa16.08■□□□□ 0.16
TOP3B-213ENST00000457179 TAOK2Q9UL54 1235 aa16.08■□□□□ 0.16
TOP3B-213ENST00000457179 UVSSAQ2YD98 709 aa16.08■□□□□ 0.16
TOP3B-213ENST00000457179 GPATCH3Q96I76 525 aa16.08■□□□□ 0.16
TOP3B-213ENST00000457179 CTNNA3Q9UI47 895 aa16.08■□□□□ 0.16
TOP3B-213ENST00000457179 NCAPD2Q15021 1401 aa16.07■□□□□ 0.16
TOP3B-213ENST00000457179 KDM4AO75164 1064 aa16.07■□□□□ 0.16
TOP3B-213ENST00000457179 GABPB1Q06547 395 aaPredicted RBP16.07■□□□□ 0.16
TOP3B-213ENST00000457179 TAF7LQ5H9L4 462 aa16.07■□□□□ 0.16
TOP3B-213ENST00000457179 CERS3Q8IU89 383 aa16.07■□□□□ 0.16
TOP3B-213ENST00000457179 CCDC66A2RUB6 948 aa16.06■□□□□ 0.16
TOP3B-213ENST00000457179 CTIFO43310 598 aaKnown RBP16.06■□□□□ 0.16
TOP3B-213ENST00000457179 GLRX3O76003 335 aaKnown RBP16.06■□□□□ 0.16
TOP3B-213ENST00000457179 GIMAP6Q6P9H5 292 aa16.06■□□□□ 0.16
TOP3B-213ENST00000457179 DDX46Q7L014 1031 aaKnown RBP16.06■□□□□ 0.16
TOP3B-213ENST00000457179 PLBD2Q8NHP8 589 aa16.06■□□□□ 0.16
TOP3B-213ENST00000457179 ZNF592Q92610 1267 aa16.06■□□□□ 0.16
TOP3B-213ENST00000457179 C8orf37Q96NL8 207 aa16.06■□□□□ 0.16
TOP3B-213ENST00000457179 TRPM3Q9HCF6 1732 aaPredicted RBP16.06■□□□□ 0.16
TOP3B-213ENST00000457179 CPDO75976 1380 aa16.06■□□□□ 0.16
TOP3B-213ENST00000457179 HEG1Q9ULI3 1381 aa16.06■□□□□ 0.16
TOP3B-213ENST00000457179 SGSM2O43147 1006 aa16.05■□□□□ 0.16
TOP3B-213ENST00000457179 AP5Z1O43299 807 aa16.05■□□□□ 0.16
TOP3B-213ENST00000457179 HDAC5Q9UQL6 1122 aa16.05■□□□□ 0.16
TOP3B-213ENST00000457179 COL5A2P05997 1499 aaPredicted RBP16.05■□□□□ 0.16
TOP3B-213ENST00000457179 CCDC183Q5T5S1 534 aa16.05■□□□□ 0.16
TOP3B-213ENST00000457179 PRPF40BQ6NWY9 871 aaKnown RBP16.05■□□□□ 0.16
TOP3B-213ENST00000457179 TIGD1Q96MW7 591 aa16.05■□□□□ 0.16
TOP3B-213ENST00000457179 DBNDD2Q9BQY9 259 aa16.05■□□□□ 0.16
TOP3B-213ENST00000457179 SNRKQ9NRH2 765 aa16.05■□□□□ 0.16
TOP3B-213ENST00000457179 CWC25Q9NXE8 425 aaPredicted RBP16.05■□□□□ 0.16
TOP3B-213ENST00000457179 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.05■□□□□ 0.16
TOP3B-213ENST00000457179 V9GYY5 206 aaPredicted RBP16.05■□□□□ 0.16
TOP3B-213ENST00000457179 ERVV-2B6SEH9 535 aa16.05■□□□□ 0.16
TOP3B-213ENST00000457179 PTGS1P23219 599 aa16.05■□□□□ 0.16
TOP3B-213ENST00000457179 PUS3Q9BZE2 481 aaKnown RBP16.05■□□□□ 0.16
TOP3B-213ENST00000457179 SNX14Q9Y5W7 946 aa16.05■□□□□ 0.16
TOP3B-213ENST00000457179 CASTP20810 708 aaKnown RBP16.04■□□□□ 0.16
TOP3B-213ENST00000457179 PTH1RQ03431 593 aa16.04■□□□□ 0.16
TOP3B-213ENST00000457179 LRRC24Q50LG9 513 aa16.04■□□□□ 0.16
TOP3B-213ENST00000457179 CNPY2Q9Y2B0 182 aa16.04■□□□□ 0.16
TOP3B-213ENST00000457179 HSPA4P34932 840 aa16.04■□□□□ 0.16
TOP3B-213ENST00000457179 ATG3Q9NT62 314 aa16.04■□□□□ 0.16
TOP3B-213ENST00000457179 AK2P54819 239 aa16.03■□□□□ 0.16
TOP3B-213ENST00000457179 HLFQ16534 295 aa16.03■□□□□ 0.16
TOP3B-213ENST00000457179 LRP10Q7Z4F1 713 aa16.03■□□□□ 0.16
TOP3B-213ENST00000457179 ERC1Q8IUD2 1116 aa16.03■□□□□ 0.16
TOP3B-213ENST00000457179 DDX41Q9UJV9 622 aaKnown RBP16.03■□□□□ 0.16
TOP3B-213ENST00000457179 ZBTB1Q9Y2K1 713 aa16.03■□□□□ 0.16
TOP3B-213ENST00000457179 FAM208AQ9UK61 1670 aaKnown RBP16.03■□□□□ 0.16
TOP3B-213ENST00000457179 FIBPO43427 364 aa16.03■□□□□ 0.16
TOP3B-213ENST00000457179 PTPN12Q05209 780 aaKnown RBP16.03■□□□□ 0.16
TOP3B-213ENST00000457179 TERF2Q15554 542 aa16.03■□□□□ 0.16
TOP3B-213ENST00000457179 GORABQ5T7V8 394 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms