RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 C6orf229H3BNL8 230 aa11.4□□□□□ -0.58
PKP4-207ENST00000457109 DDX58O95786 925 aaKnown RBP11.4□□□□□ -0.58
PKP4-207ENST00000457109 ECE1P42892 770 aa11.4□□□□□ -0.58
PKP4-207ENST00000457109 CTCFP49711 727 aaPredicted RBP11.4□□□□□ -0.58
PKP4-207ENST00000457109 MAP2K1Q02750 393 aaPredicted RBP11.4□□□□□ -0.58
PKP4-207ENST00000457109 KRT24Q2M2I5 525 aa11.4□□□□□ -0.58
PKP4-207ENST00000457109 ZNF428Q96B54 188 aa11.4□□□□□ -0.58
PKP4-207ENST00000457109 FAM89AQ96GI7 184 aa11.4□□□□□ -0.58
PKP4-207ENST00000457109 EYA3Q99504 573 aa11.4□□□□□ -0.58
PKP4-207ENST00000457109 RTFDC1Q9BY42 306 aaPredicted RBP11.4□□□□□ -0.58
PKP4-207ENST00000457109 PRKRIP1Q9H875 184 aaPredicted RBP11.4□□□□□ -0.58
PKP4-207ENST00000457109 NSFL1CQ9UNZ2 370 aaKnown RBP11.4□□□□□ -0.58
PKP4-207ENST00000457109 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
PKP4-207ENST00000457109 APAF1O14727 1248 aa11.39□□□□□ -0.59
PKP4-207ENST00000457109 RAD17O75943 681 aa11.39□□□□□ -0.59
PKP4-207ENST00000457109 SCNN1DP51172 638 aa11.39□□□□□ -0.59
PKP4-207ENST00000457109 CXCL9Q07325 125 aa11.39□□□□□ -0.59
PKP4-207ENST00000457109 KIAA2012Q0VF49 1180 aa11.39□□□□□ -0.59
PKP4-207ENST00000457109 WASHC4Q2M389 1173 aa11.39□□□□□ -0.59
PKP4-207ENST00000457109 RTL5Q5HYW3 569 aaPredicted RBP11.39□□□□□ -0.59
PKP4-207ENST00000457109 MBIPQ9NS73 344 aa11.39□□□□□ -0.59
PKP4-207ENST00000457109 IFT57Q9NWB7 429 aa11.39□□□□□ -0.59
PKP4-207ENST00000457109 GPRC5DQ9NZD1 345 aa11.39□□□□□ -0.59
PKP4-207ENST00000457109 RASSF10A6NK89 507 aa11.38□□□□□ -0.59
PKP4-207ENST00000457109 IRS4O14654 1257 aaPredicted RBP11.38□□□□□ -0.59
PKP4-207ENST00000457109 GMPSP49915 693 aaPredicted RBP11.38□□□□□ -0.59
PKP4-207ENST00000457109 GRM1Q13255 1194 aa11.38□□□□□ -0.59
PKP4-207ENST00000457109 TRIM28Q13263 835 aaKnown RBP11.38□□□□□ -0.59
PKP4-207ENST00000457109 SF3B3Q15393 1217 aaKnown RBP11.38□□□□□ -0.59
PKP4-207ENST00000457109 CCDC30Q5VVM6 783 aa11.38□□□□□ -0.59
PKP4-207ENST00000457109 ISCA1Q9BUE6 129 aa11.38□□□□□ -0.59
PKP4-207ENST00000457109 ZC3H12CQ9C0D7 883 aaKnown RBP11.38□□□□□ -0.59
PKP4-207ENST00000457109 WDR33Q9C0J8 1336 aaKnown RBP11.37□□□□□ -0.59
PKP4-207ENST00000457109 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
PKP4-207ENST00000457109 RPS8P62241 208 aaKnown RBP11.37□□□□□ -0.59
PKP4-207ENST00000457109 ZC3H15Q8WU90 426 aaKnown RBP11.37□□□□□ -0.59
PKP4-207ENST00000457109 PRDM10Q9NQV6 1147 aa11.37□□□□□ -0.59
PKP4-207ENST00000457109 CNOT7Q9UIV1 285 aaKnown RBP11.37□□□□□ -0.59
PKP4-207ENST00000457109 CCDC88AQ3V6T2 1871 aa11.37□□□□□ -0.59
PKP4-207ENST00000457109 CDHR2Q9BYE9 1310 aa11.36□□□□□ -0.59
PKP4-207ENST00000457109 LAMB4A4D0S4 1761 aa11.36□□□□□ -0.59
PKP4-207ENST00000457109 KDM3BQ7LBC6 1761 aa11.36□□□□□ -0.59
PKP4-207ENST00000457109 FOXN1O15353 648 aa11.36□□□□□ -0.59
PKP4-207ENST00000457109 NEXNQ0ZGT2 675 aa11.36□□□□□ -0.59
PKP4-207ENST00000457109 CCDC152Q4G0S7 254 aa11.36□□□□□ -0.59
PKP4-207ENST00000457109 CDC37L1Q7L3B6 337 aa11.36□□□□□ -0.59
PKP4-207ENST00000457109 ZBTB38Q8NAP3 1195 aaPredicted RBP11.36□□□□□ -0.59
PKP4-207ENST00000457109 GPR101Q96P66 508 aaPredicted RBP11.36□□□□□ -0.59
PKP4-207ENST00000457109 MYD88Q99836 296 aa11.36□□□□□ -0.59
PKP4-207ENST00000457109 STK31Q9BXU1 1019 aa11.36□□□□□ -0.59
PKP4-207ENST00000457109 ANKIB1Q9P2G1 1089 aa11.36□□□□□ -0.59
PKP4-207ENST00000457109 DICER1Q9UPY3 1922 aaKnown RBP11.35□□□□□ -0.59
PKP4-207ENST00000457109 CELF2O95319 508 aaKnown RBP11.35□□□□□ -0.59
PKP4-207ENST00000457109 CCDC191Q8NCU4 936 aa11.35□□□□□ -0.59
PKP4-207ENST00000457109 CELF1Q92879 486 aaKnown RBP11.35□□□□□ -0.59
PKP4-207ENST00000457109 CAPNS2Q96L46 248 aa11.35□□□□□ -0.59
PKP4-207ENST00000457109 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
PKP4-207ENST00000457109 WBP1LQ9NX94 342 aa11.35□□□□□ -0.59
PKP4-207ENST00000457109 CWC25Q9NXE8 425 aaPredicted RBP11.35□□□□□ -0.59
PKP4-207ENST00000457109 SCN4AP35499 1836 aa11.35□□□□□ -0.59
PKP4-207ENST00000457109 ARFGEF2Q9Y6D5 1785 aa11.34□□□□□ -0.59
PKP4-207ENST00000457109 TRAF5O00463 557 aa11.34□□□□□ -0.59
PKP4-207ENST00000457109 PDE8AO60658 829 aa11.34□□□□□ -0.59
PKP4-207ENST00000457109 ZNF853P0CG23 659 aa11.34□□□□□ -0.59
PKP4-207ENST00000457109 DPF2Q92785 391 aa11.34□□□□□ -0.59
PKP4-207ENST00000457109 DCPSQ96C86 337 aaKnown RBP11.34□□□□□ -0.59
PKP4-207ENST00000457109 PHAXQ9H814 394 aaKnown RBP11.34□□□□□ -0.59
PKP4-207ENST00000457109 DBNDD1Q9H9R9 158 aa11.34□□□□□ -0.59
PKP4-207ENST00000457109 SNED1Q8TER0 1413 aa11.34□□□□□ -0.59
PKP4-207ENST00000457109 PCCAP05165 728 aaPredicted RBP11.33□□□□□ -0.6
PKP4-207ENST00000457109 RPS12P25398 132 aaKnown RBP11.33□□□□□ -0.6
PKP4-207ENST00000457109 MAP2K2P36507 400 aa11.33□□□□□ -0.6
PKP4-207ENST00000457109 LBX1P52954 281 aa11.33□□□□□ -0.6
PKP4-207ENST00000457109 GPSM2P81274 684 aa11.33□□□□□ -0.6
PKP4-207ENST00000457109 DOK7Q18PE1 504 aa11.33□□□□□ -0.6
PKP4-207ENST00000457109 RBM26Q5T8P6 1007 aaKnown RBP11.33□□□□□ -0.6
PKP4-207ENST00000457109 SLC51AQ86UW1 340 aa11.33□□□□□ -0.6
PKP4-207ENST00000457109 ANKRD18AQ8IVF6 992 aa11.33□□□□□ -0.6
PKP4-207ENST00000457109 MICALL2Q8IY33 904 aa11.33□□□□□ -0.6
PKP4-207ENST00000457109 GLIS2Q9BZE0 524 aaPredicted RBP11.33□□□□□ -0.6
PKP4-207ENST00000457109 GGA1Q9UJY5 639 aa11.33□□□□□ -0.6
PKP4-207ENST00000457109 TLL2Q9Y6L7 1015 aa11.33□□□□□ -0.6
PKP4-207ENST00000457109 DLG5Q8TDM6 1919 aa11.33□□□□□ -0.6
PKP4-207ENST00000457109 NUP98P52948 1817 aa11.32□□□□□ -0.6
PKP4-207ENST00000457109 CACNA1SQ13698 1873 aa11.32□□□□□ -0.6
PKP4-207ENST00000457109 PSMD14O00487 310 aa11.32□□□□□ -0.6
PKP4-207ENST00000457109 ECE2O60344 883 aa11.32□□□□□ -0.6
PKP4-207ENST00000457109 CST9Q5W186 159 aa11.32□□□□□ -0.6
PKP4-207ENST00000457109 CYP4F22Q6NT55 531 aa11.32□□□□□ -0.6
PKP4-207ENST00000457109 C8orf58Q8NAV2 365 aa11.32□□□□□ -0.6
PKP4-207ENST00000457109 TBC1D16Q8TBP0 767 aa11.32□□□□□ -0.6
PKP4-207ENST00000457109 CDC5LQ99459 802 aaKnown RBP11.32□□□□□ -0.6
PKP4-207ENST00000457109 METTL22Q9BUU2 404 aaPredicted RBP11.32□□□□□ -0.6
PKP4-207ENST00000457109 POLLQ9UGP5 575 aa11.32□□□□□ -0.6
PKP4-207ENST00000457109 PGAP2Q9UHJ9 254 aa11.32□□□□□ -0.6
PKP4-207ENST00000457109 MAP3K2Q9Y2U5 619 aa11.32□□□□□ -0.6
PKP4-207ENST00000457109 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
PKP4-207ENST00000457109 CA12O43570 354 aa11.31□□□□□ -0.6
PKP4-207ENST00000457109 UFL1O94874 794 aa11.31□□□□□ -0.6
PKP4-207ENST00000457109 FMR1Q06787 632 aaKnown RBP eCLIP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 244.3 ms