RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 PSMA5P28066 241 aa22.01■■□□□ 1.11
SEMA3B-209ENST00000456560 KCNJ4P48050 445 aa22.01■■□□□ 1.11
SEMA3B-209ENST00000456560 ST3GAL1Q11201 340 aa22.01■■□□□ 1.11
SEMA3B-209ENST00000456560 TTLL7Q6ZT98 887 aa22.01■■□□□ 1.11
SEMA3B-209ENST00000456560 SYCE3A1L190 88 aa22■■□□□ 1.11
SEMA3B-209ENST00000456560 LMBR1LQ6UX01 489 aa22■■□□□ 1.11
SEMA3B-209ENST00000456560 CCDC83Q8IWF9 413 aa22■■□□□ 1.11
SEMA3B-209ENST00000456560 EDC3Q96F86 508 aaKnown RBP22■■□□□ 1.11
SEMA3B-209ENST00000456560 RFX7Q2KHR2 1363 aa22■■□□□ 1.11
SEMA3B-209ENST00000456560 GADD45BO75293 160 aaPredicted RBP22■■□□□ 1.11
SEMA3B-209ENST00000456560 TSGA10IPQ3SY00 556 aa22■■□□□ 1.11
SEMA3B-209ENST00000456560 ZNF589Q86UQ0 364 aaPredicted RBP22■■□□□ 1.11
SEMA3B-209ENST00000456560 CARD10Q9BWT7 1032 aa22■■□□□ 1.11
SEMA3B-209ENST00000456560 ALDH8A1Q9H2A2 487 aaPredicted RBP22■■□□□ 1.11
SEMA3B-209ENST00000456560 TAF5LO75529 589 aa21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 ME3Q16798 604 aa21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 DDX54Q8TDD1 881 aaKnown RBP21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 ANP32BQ92688 251 aaKnown RBP21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 GDPD2Q9HCC8 539 aa21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 SHANK3Q9BYB0 1731 aa21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 F13A1P00488 732 aa21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 IL2RBP14784 551 aa21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 GJB2P29033 226 aa21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 FOXD4L6Q3SYB3 417 aaPredicted RBP21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 RNF20Q5VTR2 975 aa21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 USPL1Q5W0Q7 1092 aa21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 FOXD4L3Q6VB84 417 aaPredicted RBP21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 DBNDD2Q9BQY9 259 aa21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 TJP1Q07157 1748 aa21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 AHDC1Q5TGY3 1603 aaPredicted RBP21.99■■□□□ 1.11
SEMA3B-209ENST00000456560 TCHHQ07283 1943 aa21.98■■□□□ 1.11
SEMA3B-209ENST00000456560 A1BGP04217 495 aa21.98■■□□□ 1.11
SEMA3B-209ENST00000456560 HSP90AA2PQ14568 343 aaPredicted RBP21.98■■□□□ 1.11
SEMA3B-209ENST00000456560 CWC25Q9NXE8 425 aaPredicted RBP21.98■■□□□ 1.11
SEMA3B-209ENST00000456560 TNS2Q63HR2 1409 aa21.98■■□□□ 1.11
SEMA3B-209ENST00000456560 COL9A3Q14050 684 aaPredicted RBP21.98■■□□□ 1.11
SEMA3B-209ENST00000456560 HAUS7Q99871 368 aa21.98■■□□□ 1.11
SEMA3B-209ENST00000456560 HMG20BQ9P0W2 317 aa21.98■■□□□ 1.11
SEMA3B-209ENST00000456560 TPCN1Q9ULQ1 816 aa21.98■■□□□ 1.11
SEMA3B-209ENST00000456560 ABCA3Q99758 1704 aa21.97■■□□□ 1.11
SEMA3B-209ENST00000456560 ATG9AQ7Z3C6 839 aa21.97■■□□□ 1.11
SEMA3B-209ENST00000456560 TAF6LQ9Y6J9 622 aa21.97■■□□□ 1.11
SEMA3B-209ENST00000456560 GLIPR1L2Q4G1C9 344 aa21.96■■□□□ 1.11
SEMA3B-209ENST00000456560 SYAP1Q96A49 352 aaPredicted RBP21.96■■□□□ 1.11
SEMA3B-209ENST00000456560 MTMR6Q9Y217 621 aa21.96■■□□□ 1.11
SEMA3B-209ENST00000456560 CNPY2Q9Y2B0 182 aa21.96■■□□□ 1.11
SEMA3B-209ENST00000456560 RRP9O43818 475 aaKnown RBP21.96■■□□□ 1.11
SEMA3B-209ENST00000456560 PHLPP1O60346 1717 aa21.96■■□□□ 1.11
SEMA3B-209ENST00000456560 RPS6KB1P23443 525 aa21.95■■□□□ 1.1
SEMA3B-209ENST00000456560 BLOC1S2Q6QNY1 142 aa21.95■■□□□ 1.1
SEMA3B-209ENST00000456560 CCDC191Q8NCU4 936 aa21.95■■□□□ 1.1
SEMA3B-209ENST00000456560 GPR108Q9NPR9 543 aa21.95■■□□□ 1.1
SEMA3B-209ENST00000456560 PDLIM2Q96JY6 352 aa21.95■■□□□ 1.1
SEMA3B-209ENST00000456560 ATP6V1DQ9Y5K8 247 aa21.95■■□□□ 1.1
SEMA3B-209ENST00000456560 ZNF609O15014 1411 aa21.94■■□□□ 1.1
SEMA3B-209ENST00000456560 NECAB1Q8N987 351 aa21.94■■□□□ 1.1
SEMA3B-209ENST00000456560 NDUFB9Q9Y6M9 179 aa21.94■■□□□ 1.1
SEMA3B-209ENST00000456560 ANKRD1Q15327 319 aa21.94■■□□□ 1.1
SEMA3B-209ENST00000456560 TOB2Q14106 344 aaPredicted RBP21.92■■□□□ 1.1
SEMA3B-209ENST00000456560 DNAJC2Q99543 621 aaKnown RBP21.92■■□□□ 1.1
SEMA3B-209ENST00000456560 ZBTB3Q9H5J0 574 aa21.92■■□□□ 1.1
SEMA3B-209ENST00000456560 COL16A1Q07092 1604 aaPredicted RBP21.92■■□□□ 1.1
SEMA3B-209ENST00000456560 CHMP3Q9Y3E7 222 aa21.92■■□□□ 1.1
SEMA3B-209ENST00000456560 IL15P40933 162 aaPredicted RBP21.91■■□□□ 1.1
SEMA3B-209ENST00000456560 MCMDC2Q4G0Z9 681 aa21.91■■□□□ 1.1
SEMA3B-209ENST00000456560 ZSCAN30Q86W11 494 aa21.91■■□□□ 1.1
SEMA3B-209ENST00000456560 KRT32Q14532 448 aa21.91■■□□□ 1.1
SEMA3B-209ENST00000456560 KBTBD3Q8NAB2 608 aa21.91■■□□□ 1.1
SEMA3B-209ENST00000456560 TSPY26PQ9H489 355 aa21.91■■□□□ 1.1
SEMA3B-209ENST00000456560 ATG3Q9NT62 314 aa21.91■■□□□ 1.1
SEMA3B-209ENST00000456560 U3KPZ7 1027 aaPredicted RBP21.91■■□□□ 1.1
SEMA3B-209ENST00000456560 TOGARAM1Q9Y4F4 1720 aa21.91■■□□□ 1.1
SEMA3B-209ENST00000456560 DTNBO60941 627 aa21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 CHGBP05060 677 aa21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 PDIA4P13667 645 aaKnown RBP21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 UBE2HP62256 183 aa21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 TICAM2Q86XR7 235 aa21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 ISCA1Q9BUE6 129 aa21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 EYA2O00167 538 aa21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 PHF14O94880 888 aa21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 TPM2P07951 284 aa21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 DDX46Q7L014 1031 aaKnown RBP21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 TCEANC2Q96MN5 208 aa21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 SEC62Q99442 399 aaKnown RBP21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 STRN4Q9NRL3 753 aa21.9■■□□□ 1.1
SEMA3B-209ENST00000456560 PALLDQ8WX93 1383 aa21.89■■□□□ 1.1
SEMA3B-209ENST00000456560 SH3TC1Q8TE82 1336 aa21.89■■□□□ 1.09
SEMA3B-209ENST00000456560 NUTM2BA6NNL0 878 aaPredicted RBP21.89■■□□□ 1.09
SEMA3B-209ENST00000456560 NUTM2EB1AL46 878 aaPredicted RBP21.89■■□□□ 1.09
SEMA3B-209ENST00000456560 CIAO1O76071 339 aa21.89■■□□□ 1.09
SEMA3B-209ENST00000456560 HS1BP3Q53T59 392 aa21.89■■□□□ 1.09
SEMA3B-209ENST00000456560 CCDC129Q6ZRS4 1044 aa21.89■■□□□ 1.09
SEMA3B-209ENST00000456560 NUTM2AQ8IVF1 878 aaPredicted RBP21.89■■□□□ 1.09
SEMA3B-209ENST00000456560 ADAMTS2O95450 1211 aa21.88■■□□□ 1.09
SEMA3B-209ENST00000456560 EVA1CP58658 441 aa21.88■■□□□ 1.09
SEMA3B-209ENST00000456560 MSNP26038 577 aaKnown RBP21.87■■□□□ 1.09
SEMA3B-209ENST00000456560 TIMM10P62072 90 aa21.87■■□□□ 1.09
SEMA3B-209ENST00000456560 DNM1Q05193 864 aaKnown RBP21.87■■□□□ 1.09
SEMA3B-209ENST00000456560 LRRC24Q50LG9 513 aa21.87■■□□□ 1.09
SEMA3B-209ENST00000456560 CCDC183Q5T5S1 534 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms