RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	CRY2	Q49AN0	593 aa		12.72	□□□□□ -0.37
CHEK2-221	ENST00000456369	SLC10A5	Q5PT55	438 aa		12.72	□□□□□ -0.37
CHEK2-221	ENST00000456369	PPP1R42	Q7Z4L9	355 aa		12.72	□□□□□ -0.37
CHEK2-221	ENST00000456369	RIC3	Q7Z5B4	369 aa		12.72	□□□□□ -0.37
CHEK2-221	ENST00000456369	PI4KAP1	Q8N8J0	262 aa		12.72	□□□□□ -0.37
CHEK2-221	ENST00000456369	METTL22	Q9BUU2	404 aa	Predicted RBP	12.72	□□□□□ -0.37
CHEK2-221	ENST00000456369	NPHP1	O15259	732 aa		12.71	□□□□□ -0.37
CHEK2-221	ENST00000456369	DDX58	O95786	925 aa	Known RBP	12.71	□□□□□ -0.37
CHEK2-221	ENST00000456369	DALRD3	Q5D0E6	543 aa	Known RBP	12.71	□□□□□ -0.37
CHEK2-221	ENST00000456369	SYNE4	Q8N205	404 aa		12.71	□□□□□ -0.37
CHEK2-221	ENST00000456369	SLC39A7	Q92504	469 aa		12.71	□□□□□ -0.37
CHEK2-221	ENST00000456369	ZNF428	Q96B54	188 aa		12.71	□□□□□ -0.37
CHEK2-221	ENST00000456369	BCS1L	Q9Y276	419 aa		12.71	□□□□□ -0.37
CHEK2-221	ENST00000456369	MAP3K2	Q9Y2U5	619 aa		12.71	□□□□□ -0.37
CHEK2-221	ENST00000456369	NUP98	P52948	1817 aa		12.71	□□□□□ -0.38
CHEK2-221	ENST00000456369	ANKRD31	Q8N7Z5	1873 aa		12.7	□□□□□ -0.38
CHEK2-221	ENST00000456369	IGKV5-2	P06315	115 aa		12.7	□□□□□ -0.38
CHEK2-221	ENST00000456369	GTF2E1	P29083	439 aa	Predicted RBP	12.7	□□□□□ -0.38
CHEK2-221	ENST00000456369	STYK1	Q6J9G0	422 aa		12.7	□□□□□ -0.38
CHEK2-221	ENST00000456369	C3orf67	Q6ZVT6	689 aa		12.7	□□□□□ -0.38
CHEK2-221	ENST00000456369	EFCAB3	Q8N7B9	438 aa		12.7	□□□□□ -0.38
CHEK2-221	ENST00000456369	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.7	□□□□□ -0.38
CHEK2-221	ENST00000456369	SH3TC1	Q8TE82	1336 aa		12.69	□□□□□ -0.38
CHEK2-221	ENST00000456369	CT47B1	P0C2W7	299 aa	Predicted RBP	12.69	□□□□□ -0.38
CHEK2-221	ENST00000456369	C7	P10643	843 aa		12.69	□□□□□ -0.38
CHEK2-221	ENST00000456369	NPR1	P16066	1061 aa		12.69	□□□□□ -0.38
CHEK2-221	ENST00000456369	MRPL50	Q8N5N7	158 aa	Known RBP	12.69	□□□□□ -0.38
CHEK2-221	ENST00000456369	TTLL6	Q8N841	843 aa		12.69	□□□□□ -0.38
CHEK2-221	ENST00000456369	CCDC191	Q8NCU4	936 aa		12.69	□□□□□ -0.38
CHEK2-221	ENST00000456369	SSH1	Q8WYL5	1049 aa		12.69	□□□□□ -0.38
CHEK2-221	ENST00000456369	MASTL	Q96GX5	879 aa		12.69	□□□□□ -0.38
CHEK2-221	ENST00000456369	MYD88	Q99836	296 aa		12.69	□□□□□ -0.38
CHEK2-221	ENST00000456369	TRMT112	Q9UI30	125 aa	Known RBP	12.69	□□□□□ -0.38
CHEK2-221	ENST00000456369	HOXA10	P31260	410 aa	Predicted RBP	12.68	□□□□□ -0.38
CHEK2-221	ENST00000456369	FKBP5	Q13451	457 aa	Predicted RBP	12.68	□□□□□ -0.38
CHEK2-221	ENST00000456369	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.68	□□□□□ -0.38
CHEK2-221	ENST00000456369	C7orf43	Q8WVR3	580 aa		12.68	□□□□□ -0.38
CHEK2-221	ENST00000456369	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
CHEK2-221	ENST00000456369	FAM89A	Q96GI7	184 aa		12.68	□□□□□ -0.38
CHEK2-221	ENST00000456369	COL11A2	P13942	1736 aa	Predicted RBP	12.68	□□□□□ -0.38
CHEK2-221	ENST00000456369	BRCA1	P38398	1863 aa	Known RBP	12.68	□□□□□ -0.38
CHEK2-221	ENST00000456369	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.67	□□□□□ -0.38
CHEK2-221	ENST00000456369	ARFGEF2	Q9Y6D5	1785 aa		12.67	□□□□□ -0.38
CHEK2-221	ENST00000456369	HCLS1	P14317	486 aa	Predicted RBP	12.67	□□□□□ -0.38
CHEK2-221	ENST00000456369	ALDH1L2	Q3SY69	923 aa		12.67	□□□□□ -0.38
CHEK2-221	ENST00000456369	IER5L	Q5T953	404 aa		12.67	□□□□□ -0.38
CHEK2-221	ENST00000456369	PRPF40B	Q6NWY9	871 aa	Known RBP	12.67	□□□□□ -0.38
CHEK2-221	ENST00000456369	DNAAF4	Q8WXU2	420 aa		12.67	□□□□□ -0.38
CHEK2-221	ENST00000456369	CNKSR1	Q969H4	720 aa		12.67	□□□□□ -0.38
CHEK2-221	ENST00000456369	CWC25	Q9NXE8	425 aa	Predicted RBP	12.67	□□□□□ -0.38
CHEK2-221	ENST00000456369	METRN	Q9UJH8	293 aa		12.67	□□□□□ -0.38
CHEK2-221	ENST00000456369	DLEC1	Q9Y238	1755 aa		12.66	□□□□□ -0.38
CHEK2-221	ENST00000456369	NEURL1B	A8MQ27	555 aa		12.66	□□□□□ -0.38
CHEK2-221	ENST00000456369		F6X3S4	739 aa		12.66	□□□□□ -0.38
CHEK2-221	ENST00000456369	SEC24B	O95487	1268 aa		12.66	□□□□□ -0.38
CHEK2-221	ENST00000456369	CWF19L2	Q2TBE0	894 aa	Known RBP	12.66	□□□□□ -0.38
CHEK2-221	ENST00000456369	LINS1	Q8NG48	757 aa		12.66	□□□□□ -0.38
CHEK2-221	ENST00000456369	NLRP3	Q96P20	1036 aa		12.66	□□□□□ -0.38
CHEK2-221	ENST00000456369	ANKRD36C	Q5JPF3	1778 aa		12.66	□□□□□ -0.38
CHEK2-221	ENST00000456369	PCCA	P05165	728 aa	Predicted RBP	12.65	□□□□□ -0.38
CHEK2-221	ENST00000456369	BRPF1	P55201	1214 aa	Predicted RBP	12.65	□□□□□ -0.38
CHEK2-221	ENST00000456369	NEXN	Q0ZGT2	675 aa		12.65	□□□□□ -0.38
CHEK2-221	ENST00000456369	BEND3	Q5T5X7	828 aa		12.65	□□□□□ -0.38
CHEK2-221	ENST00000456369	BCL2L13	Q9BXK5	485 aa		12.65	□□□□□ -0.38
CHEK2-221	ENST00000456369		H7C1W4	665 aa		12.64	□□□□□ -0.39
CHEK2-221	ENST00000456369	IRS4	O14654	1257 aa	Predicted RBP	12.64	□□□□□ -0.39
CHEK2-221	ENST00000456369	C21orf2	O43822	256 aa		12.64	□□□□□ -0.39
CHEK2-221	ENST00000456369	ALDH1B1	P30837	517 aa		12.64	□□□□□ -0.39
CHEK2-221	ENST00000456369	RARS	P54136	660 aa	Known RBP	12.64	□□□□□ -0.39
CHEK2-221	ENST00000456369	GCKR	Q14397	625 aa		12.64	□□□□□ -0.39
CHEK2-221	ENST00000456369	SF3B3	Q15393	1217 aa	Known RBP	12.64	□□□□□ -0.39
CHEK2-221	ENST00000456369	RTL5	Q5HYW3	569 aa	Predicted RBP	12.64	□□□□□ -0.39
CHEK2-221	ENST00000456369	ARHGAP27	Q6ZUM4	889 aa		12.64	□□□□□ -0.39
CHEK2-221	ENST00000456369	CRAMP1	Q96RY5	1269 aa		12.64	□□□□□ -0.39
CHEK2-221	ENST00000456369	PTPRC	P08575	1304 aa		12.63	□□□□□ -0.39
CHEK2-221	ENST00000456369	PRELP	P51888	382 aa		12.63	□□□□□ -0.39
CHEK2-221	ENST00000456369	CASP7	P55210	303 aa		12.63	□□□□□ -0.39
CHEK2-221	ENST00000456369	JARID2	Q92833	1246 aa	Predicted RBP	12.63	□□□□□ -0.39
CHEK2-221	ENST00000456369	RPGR	Q92834	1020 aa	Known RBP	12.63	□□□□□ -0.39
CHEK2-221	ENST00000456369	SMC4	Q9NTJ3	1288 aa		12.63	□□□□□ -0.39
CHEK2-221	ENST00000456369	CDHR2	Q9BYE9	1310 aa		12.62	□□□□□ -0.39
CHEK2-221	ENST00000456369	SNED1	Q8TER0	1413 aa		12.62	□□□□□ -0.39
CHEK2-221	ENST00000456369	NFKBIE	O00221	500 aa		12.62	□□□□□ -0.39
CHEK2-221	ENST00000456369	YY1	P25490	414 aa		12.62	□□□□□ -0.39
CHEK2-221	ENST00000456369	RBM17	Q96I25	401 aa	Known RBP	12.62	□□□□□ -0.39
CHEK2-221	ENST00000456369	ABCC4	O15439	1325 aa		12.62	□□□□□ -0.39
CHEK2-221	ENST00000456369	ARFGEF1	Q9Y6D6	1849 aa		12.61	□□□□□ -0.39
CHEK2-221	ENST00000456369	PLCG2	P16885	1265 aa		12.61	□□□□□ -0.39
CHEK2-221	ENST00000456369	OLFM4	Q6UX06	510 aa		12.61	□□□□□ -0.39
CHEK2-221	ENST00000456369	SLC51A	Q86UW1	340 aa		12.61	□□□□□ -0.39
CHEK2-221	ENST00000456369	LTBP3	Q9NS15	1303 aa		12.61	□□□□□ -0.39
CHEK2-221	ENST00000456369	PDE8A	O60658	829 aa		12.6	□□□□□ -0.39
CHEK2-221	ENST00000456369	ALDH1L1	O75891	902 aa		12.6	□□□□□ -0.39
CHEK2-221	ENST00000456369	HSP90B1	P14625	803 aa	Known RBP	12.6	□□□□□ -0.39
CHEK2-221	ENST00000456369	IRX5	P78411	483 aa	Predicted RBP	12.6	□□□□□ -0.39
CHEK2-221	ENST00000456369	RASSF7	Q02833	373 aa		12.6	□□□□□ -0.39
CHEK2-221	ENST00000456369	SOGA3	Q5TF21	947 aa		12.6	□□□□□ -0.39
CHEK2-221	ENST00000456369	UBE3B	Q7Z3V4	1068 aa		12.6	□□□□□ -0.39
CHEK2-221	ENST00000456369	PLA2G12B	Q9BX93	195 aa		12.6	□□□□□ -0.39
CHEK2-221	ENST00000456369	OCEL1	Q9H607	264 aa		12.6	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms