RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 MYOM3Q5VTT5 1437 aa5.85□□□□□ -1.47
RBM39-220ENST00000455343 ERBINQ96RT1 1412 aa5.85□□□□□ -1.47
RBM39-220ENST00000455343 KIF15Q9NS87 1388 aa5.85□□□□□ -1.47
RBM39-220ENST00000455343 PLEKHG1Q9ULL1 1385 aa5.85□□□□□ -1.47
RBM39-220ENST00000455343 PIK3CDO00329 1044 aa5.85□□□□□ -1.47
RBM39-220ENST00000455343 MEX3CQ5U5Q3 659 aaKnown RBP5.85□□□□□ -1.47
RBM39-220ENST00000455343 TBC1D9Q6ZT07 1266 aa5.85□□□□□ -1.47
RBM39-220ENST00000455343 BRINP3Q76B58 766 aa5.85□□□□□ -1.47
RBM39-220ENST00000455343 NEDD1Q8NHV4 660 aa5.85□□□□□ -1.47
RBM39-220ENST00000455343 OXCT2Q9BYC2 517 aaPredicted RBP5.85□□□□□ -1.47
RBM39-220ENST00000455343 CRISPLD1Q9H336 500 aa5.85□□□□□ -1.47
RBM39-220ENST00000455343 ATXN7L1Q9ULK2 861 aaPredicted RBP5.85□□□□□ -1.47
RBM39-220ENST00000455343 LMTK2Q8IWU2 1503 aa5.84□□□□□ -1.47
RBM39-220ENST00000455343 AFF2P51816 1311 aa5.84□□□□□ -1.47
RBM39-220ENST00000455343 CNTNAP5Q8WYK1 1306 aa5.84□□□□□ -1.47
RBM39-220ENST00000455343 PHF20L1A8MW92 1017 aa5.84□□□□□ -1.47
RBM39-220ENST00000455343 TMEM229AB2RXF0 380 aa5.84□□□□□ -1.47
RBM39-220ENST00000455343 OIP5O43482 229 aa5.84□□□□□ -1.47
RBM39-220ENST00000455343 ATP4AP20648 1035 aa5.84□□□□□ -1.47
RBM39-220ENST00000455343 SMTNP53814 917 aa5.84□□□□□ -1.47
RBM39-220ENST00000455343 RBM6P78332 1123 aaKnown RBP5.84□□□□□ -1.47
RBM39-220ENST00000455343 KLRG1Q96E93 195 aa5.84□□□□□ -1.47
RBM39-220ENST00000455343 RRP7BPQ9NSQ0 103 aa5.84□□□□□ -1.47
RBM39-220ENST00000455343 NDFIP2Q9NV92 336 aa5.84□□□□□ -1.47
RBM39-220ENST00000455343 KDM5AP29375 1690 aaKnown RBP5.84□□□□□ -1.47
RBM39-220ENST00000455343 PIK3C2BO00750 1634 aa5.84□□□□□ -1.47
RBM39-220ENST00000455343 AHDC1Q5TGY3 1603 aaPredicted RBP5.84□□□□□ -1.47
RBM39-220ENST00000455343 ABCC5O15440 1437 aa5.83□□□□□ -1.48
RBM39-220ENST00000455343 SETD5Q9C0A6 1442 aa5.83□□□□□ -1.48
RBM39-220ENST00000455343 PIK3R4Q99570 1358 aa5.83□□□□□ -1.48
RBM39-220ENST00000455343 KANK4Q5T7N3 995 aaPredicted RBP5.83□□□□□ -1.48
RBM39-220ENST00000455343 PODNQ7Z5L7 613 aa5.83□□□□□ -1.48
RBM39-220ENST00000455343 ZNF295-AS1Q8N0V1 137 aa5.83□□□□□ -1.48
RBM39-220ENST00000455343 C1orf216Q8TAB5 229 aa5.83□□□□□ -1.48
RBM39-220ENST00000455343 ABHD17AQ96GS6 310 aa5.83□□□□□ -1.48
RBM39-220ENST00000455343 POM121Q96HA1 1249 aa5.83□□□□□ -1.48
RBM39-220ENST00000455343 SLC4A9Q96Q91 983 aa5.83□□□□□ -1.48
RBM39-220ENST00000455343 NIFKQ9BYG3 293 aaKnown RBP5.83□□□□□ -1.48
RBM39-220ENST00000455343 ALG2Q9H553 416 aa5.83□□□□□ -1.48
RBM39-220ENST00000455343 QTRT2Q9H974 415 aaKnown RBP5.83□□□□□ -1.48
RBM39-220ENST00000455343 DNAAF2Q9NVR5 837 aaKnown RBP5.83□□□□□ -1.48
RBM39-220ENST00000455343 RGS12O14924 1447 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 ADAMTS13Q76LX8 1427 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 PHLPP1O60346 1717 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 KANK1Q14678 1352 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 DIP2AQ14689 1571 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 BNIP3LO60238 219 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 SKIP12755 728 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 ATF3P18847 181 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 FGFR3P22607 806 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 FOXK2Q01167 660 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 MTFR1Q15390 333 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 EML3Q32P44 896 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 GPAT2Q6NUI2 795 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 BEND7Q8N7W2 519 aaPredicted RBP5.82□□□□□ -1.48
RBM39-220ENST00000455343 NFATC2IPQ8NCF5 419 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 LRRC59Q96AG4 307 aaKnown RBP5.82□□□□□ -1.48
RBM39-220ENST00000455343 SERTAD1Q9UHV2 236 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 GDF2Q9UK05 429 aaPredicted RBP5.82□□□□□ -1.48
RBM39-220ENST00000455343 IQSEC3Q9UPP2 1182 aaPredicted RBP5.82□□□□□ -1.48
RBM39-220ENST00000455343 PCDHGA11Q9Y5H2 935 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 USP3Q9Y6I4 520 aa5.82□□□□□ -1.48
RBM39-220ENST00000455343 ADGRB3O60242 1522 aa5.81□□□□□ -1.48
RBM39-220ENST00000455343 A6NJY4 79 aa5.81□□□□□ -1.48
RBM39-220ENST00000455343 SHISA8B8ZZ34 492 aa5.81□□□□□ -1.48
RBM39-220ENST00000455343 IGHA1P01876 353 aa5.81□□□□□ -1.48
RBM39-220ENST00000455343 BMP4P12644 408 aa5.81□□□□□ -1.48
RBM39-220ENST00000455343 FIGNL1Q6PIW4 674 aa5.81□□□□□ -1.48
RBM39-220ENST00000455343 C1orf229Q6ZS94 237 aaPredicted RBP5.81□□□□□ -1.48
RBM39-220ENST00000455343 NLRP8Q86W28 1048 aa5.81□□□□□ -1.48
RBM39-220ENST00000455343 WWC1Q8IX03 1113 aa5.81□□□□□ -1.48
RBM39-220ENST00000455343 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.81□□□□□ -1.48
RBM39-220ENST00000455343 DCCP43146 1447 aa5.81□□□□□ -1.48
RBM39-220ENST00000455343 RIMS2Q9UQ26 1411 aa5.81□□□□□ -1.48
RBM39-220ENST00000455343 EP400Q96L91 3159 aa5.81□□□□□ -1.48
RBM39-220ENST00000455343 CEP152O94986 1710 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 RPRD2Q5VT52 1461 aaKnown RBP5.8□□□□□ -1.48
RBM39-220ENST00000455343 CDK2AP1O14519 115 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 C2CD2LO14523 706 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 LZTS3O60299 673 aaPredicted RBP5.8□□□□□ -1.48
RBM39-220ENST00000455343 GTF2IP78347 998 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 CTBSQ01459 385 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 NCOA4Q13772 614 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 SUZ12Q15022 739 aaKnown RBP5.8□□□□□ -1.48
RBM39-220ENST00000455343 NBPF1Q3BBV0 1214 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 SLCO4C1Q6ZQN7 724 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 C14orf37Q86TY3 774 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 FNBP4Q8N3X1 1017 aaPredicted RBP5.8□□□□□ -1.48
RBM39-220ENST00000455343 GOLGA6L1Q8N7Z2 621 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 NGLY1Q96IV0 654 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 DCAF5Q96JK2 942 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 C8orf37Q96NL8 207 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 ZCCHC2Q9C0B9 1178 aaKnown RBP5.8□□□□□ -1.48
RBM39-220ENST00000455343 NOD1Q9Y239 953 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 AMOTL2Q9Y2J4 779 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 PTPRUQ92729 1446 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 ATAD2Q6PL18 1390 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 PNPLA6Q8IY17 1366 aa5.8□□□□□ -1.48
RBM39-220ENST00000455343 SHPRHQ149N8 1683 aa5.79□□□□□ -1.48
RBM39-220ENST00000455343 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms