RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 CLIP2Q9UDT6 1046 aa4.05□□□□□ -1.76
AC006539.3-201ENST00000454258 DNAI1Q9UI46 699 aa4.05□□□□□ -1.76
AC006539.3-201ENST00000454258 POGZQ7Z3K3 1410 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 A0A1W2PP64 1363 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 MAP3K5Q99683 1374 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 ATXN2Q99700 1313 aaKnown RBP4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 H2AFXP16104 143 aaPredicted RBP4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 SFPQP23246 707 aaKnown RBP eCLIP4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 CASQ1P31415 396 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 ZNF75DP51815 510 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 MAP3K9P80192 1104 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 PSME1Q06323 249 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 TYRO3Q06418 890 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 RAD51AP2Q09MP3 1159 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 SNW1Q13573 536 aaKnown RBP4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 HIC1Q14526 733 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 LRRFIP1Q32MZ4 808 aaKnown RBP4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 VPS53Q5VIR6 699 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 ICE2Q659A1 982 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 CEP85Q6P2H3 762 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 CCDC73Q6ZRK6 1079 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 NYAP1Q6ZVC0 841 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 USP48Q86UV5 1035 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 NUTM1Q86Y26 1132 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 ERC1Q8IUD2 1116 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 EFCAB13Q8IY85 973 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 TSR2Q969E8 191 aaKnown RBP4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 FBXW7Q969H0 707 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 CCDC34Q96HJ3 373 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 MPHOSPH8Q99549 860 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 NCAPGQ9BPX3 1015 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 BPIFA3Q9BQP9 254 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 CLSTN2Q9H4D0 955 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 ARFGAP3Q9NP61 516 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 MED4Q9NPJ6 270 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 ANO2Q9NQ90 1003 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 BMP2KQ9NSY1 1161 aaPredicted RBP4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 RBM28Q9NW13 759 aaKnown RBP4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 BABAM1Q9NWV8 329 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 BCCIPQ9P287 314 aaKnown RBP eCLIP4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 RBM27Q9P2N5 1060 aaKnown RBP4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 STAP2Q9UGK3 403 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 TRIM35Q9UPQ4 493 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 AMOTL2Q9Y2J4 779 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 ZDHHC9Q9Y397 364 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 RRP7AQ9Y3A4 280 aaKnown RBP4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 SPATA31D1Q6ZQQ2 1576 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 KNDC1Q76NI1 1749 aa4.04□□□□□ -1.76
AC006539.3-201ENST00000454258 DIP2AQ14689 1571 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 CCDC151A5D8V7 595 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 C2orf72A6NCS6 295 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 FIBPO43427 364 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 KINO60870 393 aaKnown RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 RPS6KA5O75582 802 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 SMC2O95347 1197 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 GNAI2P04899 355 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 ZNF853P0CG23 659 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 OSBPP22059 807 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 ZNF165P49910 485 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 GTF2A1P52655 376 aaPredicted RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 PDE1AP54750 535 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 EIF5P55010 431 aaKnown RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 TTLL12Q14166 644 aaPredicted RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 BRD3Q15059 726 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 TTC31Q49AM3 519 aaPredicted RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 MAP9Q49MG5 647 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 SUGP1Q8IWZ8 645 aaKnown RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 ZGPATQ8N5A5 531 aaKnown RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 GPR161Q8N6U8 529 aaKnown RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 CTCFLQ8NI51 663 aaPredicted RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 RUBCNQ92622 972 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 PCMTD1Q96MG8 357 aaPredicted RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 STK31Q9BXU1 1019 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 OSBPL5Q9H0X9 879 aaPredicted RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 ALDH8A1Q9H2A2 487 aaPredicted RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 CYP46A1Q9Y6A2 500 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 MON2Q7Z3U7 1717 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 A2ML1A8K2U0 1454 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 NEO1Q92859 1461 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 MLH3Q9UHC1 1453 aa4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 FAM208AQ9UK61 1670 aaKnown RBP4.03□□□□□ -1.76
AC006539.3-201ENST00000454258 TTC21AQ8NDW8 1320 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 CCDC196A0A1B0GTZ2 297 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 TMCO5BA8MYB1 307 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 TRIM6-TRIM34B2RNG4 842 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 VAMP4O75379 141 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 APPP05067 770 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 SKILP12757 684 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 PTGS1P23219 599 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 MAGEA9P43362 315 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 ZSCAN26Q16670 478 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 KMT5BQ4FZB7 885 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 CFAP70Q5T0N1 1121 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 GORABQ5T7V8 394 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 IQCEQ6IPM2 695 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 LRRC8AQ8IWT6 810 aa4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 FAM177A1Q8N128 213 aaPredicted RBP4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 CCAR2Q8N163 923 aaKnown RBP4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 PDCD7Q8N8D1 485 aaKnown RBP4.02□□□□□ -1.77
AC006539.3-201ENST00000454258 BICD2Q8TD16 824 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms