RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 TTLL6Q8N841 843 aa19.73■□□□□ 0.75
RBM39-219ENST00000453310 CNKSR1Q969H4 720 aa19.73■□□□□ 0.75
RBM39-219ENST00000453310 RBM17Q96I25 401 aaKnown RBP19.73■□□□□ 0.75
RBM39-219ENST00000453310 SUCLG2Q96I99 432 aa19.73■□□□□ 0.75
RBM39-219ENST00000453310 MEIS3Q99687 375 aa19.73■□□□□ 0.75
RBM39-219ENST00000453310 UBTFL1P0CB47 393 aaPredicted RBP19.72■□□□□ 0.75
RBM39-219ENST00000453310 PELP1Q8IZL8 1130 aaKnown RBP19.72■□□□□ 0.75
RBM39-219ENST00000453310 BCS1LQ9Y276 419 aa19.72■□□□□ 0.75
RBM39-219ENST00000453310 UTRNP46939 3433 aa19.72■□□□□ 0.75
RBM39-219ENST00000453310 ALDH1B1P30837 517 aa19.71■□□□□ 0.75
RBM39-219ENST00000453310 FOXO4P98177 505 aa19.71■□□□□ 0.75
RBM39-219ENST00000453310 PDE3AQ14432 1141 aa19.71■□□□□ 0.75
RBM39-219ENST00000453310 PRPF40BQ6NWY9 871 aaKnown RBP19.71■□□□□ 0.75
RBM39-219ENST00000453310 DDX46Q7L014 1031 aaKnown RBP19.71■□□□□ 0.75
RBM39-219ENST00000453310 TTLL11Q8NHH1 800 aa19.71■□□□□ 0.75
RBM39-219ENST00000453310 KAZALD1Q96I82 304 aa19.71■□□□□ 0.75
RBM39-219ENST00000453310 CCDC85AQ96PX6 553 aaPredicted RBP19.71■□□□□ 0.75
RBM39-219ENST00000453310 CRAMP1Q96RY5 1269 aa19.71■□□□□ 0.75
RBM39-219ENST00000453310 SLX4Q8IY92 1834 aa19.71■□□□□ 0.75
RBM39-219ENST00000453310 ARFGEF1Q9Y6D6 1849 aa19.71■□□□□ 0.75
RBM39-219ENST00000453310 EPHA10Q5JZY3 1008 aa19.7■□□□□ 0.74
RBM39-219ENST00000453310 C20orf194Q5TEA3 1177 aa19.7■□□□□ 0.74
RBM39-219ENST00000453310 TAF1P21675 1872 aa19.7■□□□□ 0.74
RBM39-219ENST00000453310 RTL9Q8NET4 1388 aa19.7■□□□□ 0.74
RBM39-219ENST00000453310 CSF1RP07333 972 aa19.69■□□□□ 0.74
RBM39-219ENST00000453310 GNAI3P08754 354 aa19.69■□□□□ 0.74
RBM39-219ENST00000453310 YBX3P16989 372 aaKnown RBP eCLIP19.69■□□□□ 0.74
RBM39-219ENST00000453310 GPR162Q16538 588 aa19.69■□□□□ 0.74
RBM39-219ENST00000453310 BICC1Q9H694 974 aaKnown RBP19.69■□□□□ 0.74
RBM39-219ENST00000453310 GREM2Q9H772 168 aa19.69■□□□□ 0.74
RBM39-219ENST00000453310 COL4A1P02462 1669 aa19.68■□□□□ 0.74
RBM39-219ENST00000453310 GRAPQ13588 217 aa19.68■□□□□ 0.74
RBM39-219ENST00000453310 MVPQ14764 893 aaKnown RBP19.68■□□□□ 0.74
RBM39-219ENST00000453310 FAM161AQ3B820 660 aa19.68■□□□□ 0.74
RBM39-219ENST00000453310 LMBR1LQ6UX01 489 aa19.68■□□□□ 0.74
RBM39-219ENST00000453310 GRAPLQ8TC17 118 aaPredicted RBP19.68■□□□□ 0.74
RBM39-219ENST00000453310 SEC31BQ9NQW1 1179 aa19.68■□□□□ 0.74
RBM39-219ENST00000453310 COG6Q9Y2V7 657 aa19.68■□□□□ 0.74
RBM39-219ENST00000453310 RABL6Q3YEC7 729 aaPredicted RBP19.67■□□□□ 0.74
RBM39-219ENST00000453310 HDAC5Q9UQL6 1122 aa19.67■□□□□ 0.74
RBM39-219ENST00000453310 CHMP3Q9Y3E7 222 aa19.67■□□□□ 0.74
RBM39-219ENST00000453310 LRRFIP2Q9Y608 721 aaKnown RBP19.67■□□□□ 0.74
RBM39-219ENST00000453310 PPEF1O14829 653 aaPredicted RBP19.66■□□□□ 0.74
RBM39-219ENST00000453310 ZBTB7BO15156 539 aaPredicted RBP19.66■□□□□ 0.74
RBM39-219ENST00000453310 ANKRD44Q8N8A2 993 aa19.66■□□□□ 0.74
RBM39-219ENST00000453310 CELF1Q92879 486 aaKnown RBP19.66■□□□□ 0.74
RBM39-219ENST00000453310 C21orf2O43822 256 aa19.65■□□□□ 0.74
RBM39-219ENST00000453310 ITGA6P23229 1130 aa19.65■□□□□ 0.74
RBM39-219ENST00000453310 CDC5LQ99459 802 aaKnown RBP19.65■□□□□ 0.74
RBM39-219ENST00000453310 ZNF219Q9P2Y4 722 aaPredicted RBP19.65■□□□□ 0.74
RBM39-219ENST00000453310 DDX19BQ9UMR2 479 aa19.65■□□□□ 0.74
RBM39-219ENST00000453310 SUPT16HQ9Y5B9 1047 aaKnown RBP19.65■□□□□ 0.74
RBM39-219ENST00000453310 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.73
RBM39-219ENST00000453310 BBOX1O75936 387 aa19.64■□□□□ 0.73
RBM39-219ENST00000453310 GNAI2P04899 355 aa19.64■□□□□ 0.73
RBM39-219ENST00000453310 C7orf43Q8WVR3 580 aa19.64■□□□□ 0.73
RBM39-219ENST00000453310 SPEF2Q9C093 1822 aa19.64■□□□□ 0.73
RBM39-219ENST00000453310 ANKRD18BA2A2Z9 1011 aa19.63■□□□□ 0.73
RBM39-219ENST00000453310 RPS8P62241 208 aaKnown RBP19.63■□□□□ 0.73
RBM39-219ENST00000453310 IFIT5Q13325 482 aaKnown RBP19.63■□□□□ 0.73
RBM39-219ENST00000453310 TMC4Q7Z404 712 aa19.63■□□□□ 0.73
RBM39-219ENST00000453310 ANKRD18AQ8IVF6 992 aa19.63■□□□□ 0.73
RBM39-219ENST00000453310 LRRC37AA6NMS7 1700 aa19.62■□□□□ 0.73
RBM39-219ENST00000453310 GRIN3BO60391 1043 aa19.62■□□□□ 0.73
RBM39-219ENST00000453310 CCDC57Q2TAC2 916 aa19.62■□□□□ 0.73
RBM39-219ENST00000453310 SOGA3Q5TF21 947 aa19.62■□□□□ 0.73
RBM39-219ENST00000453310 OLFM4Q6UX06 510 aa19.62■□□□□ 0.73
RBM39-219ENST00000453310 SLC51AQ86UW1 340 aa19.62■□□□□ 0.73
RBM39-219ENST00000453310 ATP6V0A2Q9Y487 856 aa19.62■□□□□ 0.73
RBM39-219ENST00000453310 CCDC93Q567U6 631 aa19.61■□□□□ 0.73
RBM39-219ENST00000453310 C1orf115Q9H7X2 142 aa19.61■□□□□ 0.73
RBM39-219ENST00000453310 IGHMBP2P38935 993 aaKnown RBP19.6■□□□□ 0.73
RBM39-219ENST00000453310 TAF7LQ5H9L4 462 aa19.6■□□□□ 0.73
RBM39-219ENST00000453310 CC2D2BQ6DHV5 1058 aa19.6■□□□□ 0.73
RBM39-219ENST00000453310 SP8Q8IXZ3 490 aa19.6■□□□□ 0.73
RBM39-219ENST00000453310 TMX4Q9H1E5 349 aaPredicted RBP19.6■□□□□ 0.73
RBM39-219ENST00000453310 CHMP4BQ9H444 224 aaKnown RBP19.6■□□□□ 0.73
RBM39-219ENST00000453310 FER1L6Q2WGJ9 1857 aa19.6■□□□□ 0.73
RBM39-219ENST00000453310 SNED1Q8TER0 1413 aa19.59■□□□□ 0.73
RBM39-219ENST00000453310 ARHGAP27Q6ZUM4 889 aa19.59■□□□□ 0.73
RBM39-219ENST00000453310 ZBTB40Q9NUA8 1239 aa19.59■□□□□ 0.73
RBM39-219ENST00000453310 MTX1Q13505 466 aa19.58■□□□□ 0.72
RBM39-219ENST00000453310 ZNF594Q96JF6 807 aaPredicted RBP19.58■□□□□ 0.72
RBM39-219ENST00000453310 MPHOSPH8Q99549 860 aa19.58■□□□□ 0.72
RBM39-219ENST00000453310 BSDC1Q9NW68 430 aaPredicted RBP19.58■□□□□ 0.72
RBM39-219ENST00000453310 NFKBIEO00221 500 aa19.57■□□□□ 0.72
RBM39-219ENST00000453310 RTKN2Q8IZC4 609 aa19.57■□□□□ 0.72
RBM39-219ENST00000453310 CRBNQ96SW2 442 aa19.57■□□□□ 0.72
RBM39-219ENST00000453310 SRGAP3O43295 1099 aa19.56■□□□□ 0.72
RBM39-219ENST00000453310 RFX5P48382 616 aaPredicted RBP19.56■□□□□ 0.72
RBM39-219ENST00000453310 GRIPAP1Q4V328 841 aa19.56■□□□□ 0.72
RBM39-219ENST00000453310 LTBP1Q14766 1721 aa19.56■□□□□ 0.72
RBM39-219ENST00000453310 CENPBP07199 599 aaPredicted RBP19.55■□□□□ 0.72
RBM39-219ENST00000453310 RASSF7Q02833 373 aa19.55■□□□□ 0.72
RBM39-219ENST00000453310 LDHAL6AQ6ZMR3 332 aa19.55■□□□□ 0.72
RBM39-219ENST00000453310 KLHDC4Q8TBB5 520 aa19.55■□□□□ 0.72
RBM39-219ENST00000453310 TAOK3Q9H2K8 898 aa19.55■□□□□ 0.72
RBM39-219ENST00000453310 LTBP3Q9NS15 1303 aa19.54■□□□□ 0.72
RBM39-219ENST00000453310 PNMA6EA0A0J9YXQ4 647 aa19.54■□□□□ 0.72
RBM39-219ENST00000453310 FKBP4Q02790 459 aaKnown RBP eCLIP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms