RNA–Protein interactions for RNA: ENST00000451491.2

TSSC4-207, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-207ENST00000451491 HOXA10P31260 410 aaPredicted RBP25.31■■□□□ 1.64
TSSC4-207ENST00000451491 FOXO4P98177 505 aa25.31■■□□□ 1.64
TSSC4-207ENST00000451491 TTLL11Q8NHH1 800 aa25.31■■□□□ 1.64
TSSC4-207ENST00000451491 RPGRQ92834 1020 aaKnown RBP25.31■■□□□ 1.64
TSSC4-207ENST00000451491 COG6Q9Y2V7 657 aa25.31■■□□□ 1.64
TSSC4-207ENST00000451491 EPHA10Q5JZY3 1008 aa25.3■■□□□ 1.64
TSSC4-207ENST00000451491 ZBTB7BO15156 539 aaPredicted RBP25.29■■□□□ 1.64
TSSC4-207ENST00000451491 CSF1RP07333 972 aa25.29■■□□□ 1.64
TSSC4-207ENST00000451491 ZNF622Q969S3 477 aaKnown RBP eCLIP25.29■■□□□ 1.64
TSSC4-207ENST00000451491 PIM2Q9P1W9 311 aa25.29■■□□□ 1.64
TSSC4-207ENST00000451491 CACNA1SQ13698 1873 aa25.29■■□□□ 1.64
TSSC4-207ENST00000451491 CCDC152Q4G0S7 254 aa25.29■■□□□ 1.64
TSSC4-207ENST00000451491 HDAC5Q9UQL6 1122 aa25.29■■□□□ 1.64
TSSC4-207ENST00000451491 TAF1P21675 1872 aa25.28■■□□□ 1.64
TSSC4-207ENST00000451491 RBM17Q96I25 401 aaKnown RBP25.28■■□□□ 1.64
TSSC4-207ENST00000451491 CRAMP1Q96RY5 1269 aa25.28■■□□□ 1.64
TSSC4-207ENST00000451491 DDX19BQ9UMR2 479 aa25.28■■□□□ 1.64
TSSC4-207ENST00000451491 RABL6Q3YEC7 729 aaPredicted RBP25.27■■□□□ 1.64
TSSC4-207ENST00000451491 CNKSR1Q969H4 720 aa25.27■■□□□ 1.64
TSSC4-207ENST00000451491 BICC1Q9H694 974 aaKnown RBP25.27■■□□□ 1.64
TSSC4-207ENST00000451491 RTL9Q8NET4 1388 aa25.26■■□□□ 1.63
TSSC4-207ENST00000451491 SLX4Q8IY92 1834 aa25.26■■□□□ 1.63
TSSC4-207ENST00000451491 ALDH1B1P30837 517 aa25.26■■□□□ 1.63
TSSC4-207ENST00000451491 LMBR1LQ6UX01 489 aa25.26■■□□□ 1.63
TSSC4-207ENST00000451491 DDX46Q7L014 1031 aaKnown RBP25.26■■□□□ 1.63
TSSC4-207ENST00000451491 TTLL6Q8N841 843 aa25.26■■□□□ 1.63
TSSC4-207ENST00000451491 CCDC85AQ96PX6 553 aaPredicted RBP25.26■■□□□ 1.63
TSSC4-207ENST00000451491 LRRFIP2Q9Y608 721 aaKnown RBP25.26■■□□□ 1.63
TSSC4-207ENST00000451491 CENPBP07199 599 aaPredicted RBP25.25■■□□□ 1.63
TSSC4-207ENST00000451491 ANKRD44Q8N8A2 993 aa25.25■■□□□ 1.63
TSSC4-207ENST00000451491 GREM2Q9H772 168 aa25.25■■□□□ 1.63
TSSC4-207ENST00000451491 ARFGEF1Q9Y6D6 1849 aa25.24■■□□□ 1.63
TSSC4-207ENST00000451491 WWC3Q9ULE0 1092 aa25.24■■□□□ 1.63
TSSC4-207ENST00000451491 COL4A1P02462 1669 aa25.23■■□□□ 1.63
TSSC4-207ENST00000451491 GNAI2P04899 355 aa25.23■■□□□ 1.63
TSSC4-207ENST00000451491 FAM161AQ3B820 660 aa25.23■■□□□ 1.63
TSSC4-207ENST00000451491 DALRD3Q5D0E6 543 aaKnown RBP25.23■■□□□ 1.63
TSSC4-207ENST00000451491 PRPF40BQ6NWY9 871 aaKnown RBP25.23■■□□□ 1.63
TSSC4-207ENST00000451491 SEC31BQ9NQW1 1179 aa25.23■■□□□ 1.63
TSSC4-207ENST00000451491 GRAPQ13588 217 aa25.22■■□□□ 1.63
TSSC4-207ENST00000451491 GRAPLQ8TC17 118 aaPredicted RBP25.22■■□□□ 1.63
TSSC4-207ENST00000451491 CHMP4BQ9H444 224 aaKnown RBP25.22■■□□□ 1.63
TSSC4-207ENST00000451491 ITGA6P23229 1130 aa25.21■■□□□ 1.63
TSSC4-207ENST00000451491 ZBTB40Q9NUA8 1239 aa25.21■■□□□ 1.63
TSSC4-207ENST00000451491 BCS1LQ9Y276 419 aa25.21■■□□□ 1.63
TSSC4-207ENST00000451491 CELF1Q92879 486 aaKnown RBP25.2■■□□□ 1.63
TSSC4-207ENST00000451491 CHMP3Q9Y3E7 222 aa25.2■■□□□ 1.63
TSSC4-207ENST00000451491 BBOX1O75936 387 aa25.2■■□□□ 1.62
TSSC4-207ENST00000451491 RPS8P62241 208 aaKnown RBP25.19■■□□□ 1.62
TSSC4-207ENST00000451491 IFIT5Q13325 482 aaKnown RBP25.19■■□□□ 1.62
TSSC4-207ENST00000451491 CDC5LQ99459 802 aaKnown RBP25.19■■□□□ 1.62
TSSC4-207ENST00000451491 SPEF2Q9C093 1822 aa25.18■■□□□ 1.62
TSSC4-207ENST00000451491 ANKRD18BA2A2Z9 1011 aa25.18■■□□□ 1.62
TSSC4-207ENST00000451491 YBX3P16989 372 aaKnown RBP eCLIP25.18■■□□□ 1.62
TSSC4-207ENST00000451491 MTX1Q13505 466 aa25.18■■□□□ 1.62
TSSC4-207ENST00000451491 CCDC57Q2TAC2 916 aa25.18■■□□□ 1.62
TSSC4-207ENST00000451491 C7orf43Q8WVR3 580 aa25.18■■□□□ 1.62
TSSC4-207ENST00000451491 CRBNQ96SW2 442 aa25.18■■□□□ 1.62
TSSC4-207ENST00000451491 C1orf115Q9H7X2 142 aa25.18■■□□□ 1.62
TSSC4-207ENST00000451491 PPEF1O14829 653 aaPredicted RBP25.17■■□□□ 1.62
TSSC4-207ENST00000451491 ANKRD18AQ8IVF6 992 aa25.17■■□□□ 1.62
TSSC4-207ENST00000451491 GOLGB1Q14789 3259 aaKnown RBP25.16■■□□□ 1.62
TSSC4-207ENST00000451491 LRRC37AA6NMS7 1700 aa25.16■■□□□ 1.62
TSSC4-207ENST00000451491 TMC4Q7Z404 712 aa25.16■■□□□ 1.62
TSSC4-207ENST00000451491 C21orf2O43822 256 aa25.15■■□□□ 1.62
TSSC4-207ENST00000451491 PELP1Q8IZL8 1130 aaKnown RBP25.15■■□□□ 1.62
TSSC4-207ENST00000451491 GPR162Q16538 588 aa25.14■■□□□ 1.62
TSSC4-207ENST00000451491 ATP6V0A2Q9Y487 856 aa25.14■■□□□ 1.62
TSSC4-207ENST00000451491 IGHMBP2P38935 993 aaKnown RBP25.13■■□□□ 1.61
TSSC4-207ENST00000451491 RFX5P48382 616 aaPredicted RBP25.13■■□□□ 1.61
TSSC4-207ENST00000451491 BSDC1Q9NW68 430 aaPredicted RBP25.13■■□□□ 1.61
TSSC4-207ENST00000451491 ZNF219Q9P2Y4 722 aaPredicted RBP25.13■■□□□ 1.61
TSSC4-207ENST00000451491 SLC51AQ86UW1 340 aa25.12■■□□□ 1.61
TSSC4-207ENST00000451491 SP8Q8IXZ3 490 aa25.12■■□□□ 1.61
TSSC4-207ENST00000451491 ZNF594Q96JF6 807 aaPredicted RBP25.12■■□□□ 1.61
TSSC4-207ENST00000451491 SRGAP3O43295 1099 aa25.12■■□□□ 1.61
TSSC4-207ENST00000451491 ATP8B2P98198 1209 aa25.12■■□□□ 1.61
TSSC4-207ENST00000451491 TAF7LQ5H9L4 462 aa25.12■■□□□ 1.61
TSSC4-207ENST00000451491 SOGA3Q5TF21 947 aa25.12■■□□□ 1.61
TSSC4-207ENST00000451491 CC2D2BQ6DHV5 1058 aa25.12■■□□□ 1.61
TSSC4-207ENST00000451491 OLFM4Q6UX06 510 aa25.12■■□□□ 1.61
TSSC4-207ENST00000451491 MPHOSPH8Q99549 860 aa25.12■■□□□ 1.61
TSSC4-207ENST00000451491 SNED1Q8TER0 1413 aa25.11■■□□□ 1.61
TSSC4-207ENST00000451491 FER1L6Q2WGJ9 1857 aa25.11■■□□□ 1.61
TSSC4-207ENST00000451491 PNMA6EA0A0J9YXQ4 647 aa25.11■■□□□ 1.61
TSSC4-207ENST00000451491 CEP85Q6P2H3 762 aa25.11■■□□□ 1.61
TSSC4-207ENST00000451491 PTPN12Q05209 780 aaKnown RBP25.1■■□□□ 1.61
TSSC4-207ENST00000451491 CCDC93Q567U6 631 aa25.1■■□□□ 1.61
TSSC4-207ENST00000451491 KLHDC4Q8TBB5 520 aa25.1■■□□□ 1.61
TSSC4-207ENST00000451491 LDHAL6AQ6ZMR3 332 aa25.09■■□□□ 1.61
TSSC4-207ENST00000451491 TMX4Q9H1E5 349 aaPredicted RBP25.09■■□□□ 1.61
TSSC4-207ENST00000451491 GRIN3BO60391 1043 aa25.08■■□□□ 1.61
TSSC4-207ENST00000451491 IRX6P78412 446 aaPredicted RBP25.08■■□□□ 1.61
TSSC4-207ENST00000451491 POLA2Q14181 598 aa25.08■■□□□ 1.61
TSSC4-207ENST00000451491 GRIPAP1Q4V328 841 aa25.08■■□□□ 1.61
TSSC4-207ENST00000451491 RPAP2Q8IXW5 612 aaPredicted RBP25.08■■□□□ 1.61
TSSC4-207ENST00000451491 EXOC6Q8TAG9 804 aa25.08■■□□□ 1.61
TSSC4-207ENST00000451491 SSH3Q8TE77 659 aa25.08■■□□□ 1.61
TSSC4-207ENST00000451491 LTBP1Q14766 1721 aa25.07■■□□□ 1.6
TSSC4-207ENST00000451491 AAMPQ13685 434 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms