RNA–Protein interactions for RNA: ENST00000450643.5

RHBDF1-206, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-206ENST00000450643 SRGNP10124 158 aa21.39■■□□□ 1.01
RHBDF1-206ENST00000450643 CCDC152Q4G0S7 254 aa21.39■■□□□ 1.01
RHBDF1-206ENST00000450643 MASTLQ96GX5 879 aa21.39■■□□□ 1.01
RHBDF1-206ENST00000450643 RBM17Q96I25 401 aaKnown RBP21.39■■□□□ 1.01
RHBDF1-206ENST00000450643 DDX19BQ9UMR2 479 aa21.39■■□□□ 1.01
RHBDF1-206ENST00000450643 HDAC5Q9UQL6 1122 aa21.39■■□□□ 1.01
RHBDF1-206ENST00000450643 KLRG2A4D1S0 409 aaPredicted RBP21.38■■□□□ 1.01
RHBDF1-206ENST00000450643 CRY2Q49AN0 593 aa21.38■■□□□ 1.01
RHBDF1-206ENST00000450643 DDX46Q7L014 1031 aaKnown RBP21.38■■□□□ 1.01
RHBDF1-206ENST00000450643 PELP1Q8IZL8 1130 aaKnown RBP21.38■■□□□ 1.01
RHBDF1-206ENST00000450643 PLA2G12BQ9BX93 195 aa21.38■■□□□ 1.01
RHBDF1-206ENST00000450643 SF3B3Q15393 1217 aaKnown RBP21.37■■□□□ 1.01
RHBDF1-206ENST00000450643 STYK1Q6J9G0 422 aa21.37■■□□□ 1.01
RHBDF1-206ENST00000450643 BICC1Q9H694 974 aaKnown RBP21.37■■□□□ 1.01
RHBDF1-206ENST00000450643 PIM2Q9P1W9 311 aa21.37■■□□□ 1.01
RHBDF1-206ENST00000450643 LRRFIP2Q9Y608 721 aaKnown RBP21.37■■□□□ 1.01
RHBDF1-206ENST00000450643 EPHA10Q5JZY3 1008 aa21.36■■□□□ 1.01
RHBDF1-206ENST00000450643 LMBR1LQ6UX01 489 aa21.36■■□□□ 1.01
RHBDF1-206ENST00000450643 SLX4Q8IY92 1834 aa21.36■■□□□ 1.01
RHBDF1-206ENST00000450643 ARFGEF1Q9Y6D6 1849 aa21.35■■□□□ 1.01
RHBDF1-206ENST00000450643 GNAI2P04899 355 aa21.35■■□□□ 1.01
RHBDF1-206ENST00000450643 FOXO4P98177 505 aa21.35■■□□□ 1.01
RHBDF1-206ENST00000450643 FAM161AQ3B820 660 aa21.35■■□□□ 1.01
RHBDF1-206ENST00000450643 TTLL11Q8NHH1 800 aa21.35■■□□□ 1.01
RHBDF1-206ENST00000450643 CNKSR1Q969H4 720 aa21.35■■□□□ 1.01
RHBDF1-206ENST00000450643 CHMP4BQ9H444 224 aaKnown RBP21.35■■□□□ 1.01
RHBDF1-206ENST00000450643 BCS1LQ9Y276 419 aa21.35■■□□□ 1.01
RHBDF1-206ENST00000450643 KCNA3P22001 575 aa21.34■■□□□ 1.01
RHBDF1-206ENST00000450643 ALDH1B1P30837 517 aa21.34■■□□□ 1.01
RHBDF1-206ENST00000450643 DALRD3Q5D0E6 543 aaKnown RBP21.34■■□□□ 1.01
RHBDF1-206ENST00000450643 TTLL6Q8N841 843 aa21.34■■□□□ 1.01
RHBDF1-206ENST00000450643 KAZALD1Q96I82 304 aa21.34■■□□□ 1.01
RHBDF1-206ENST00000450643 GREM2Q9H772 168 aa21.34■■□□□ 1.01
RHBDF1-206ENST00000450643 C1orf115Q9H7X2 142 aa21.34■■□□□ 1.01
RHBDF1-206ENST00000450643 ZNF219Q9P2Y4 722 aaPredicted RBP21.34■■□□□ 1.01
RHBDF1-206ENST00000450643 ZBTB7BO15156 539 aaPredicted RBP21.33■■□□□ 1.01
RHBDF1-206ENST00000450643 HOXA10P31260 410 aaPredicted RBP21.33■■□□□ 1.01
RHBDF1-206ENST00000450643 CRAMP1Q96RY5 1269 aa21.33■■□□□ 1.01
RHBDF1-206ENST00000450643 CRBNQ96SW2 442 aa21.33■■□□□ 1.01
RHBDF1-206ENST00000450643 SEC31BQ9NQW1 1179 aa21.33■■□□□ 1.01
RHBDF1-206ENST00000450643 COL4A1P02462 1669 aa21.32■■□□□ 1
RHBDF1-206ENST00000450643 GRAPQ13588 217 aa21.32■■□□□ 1
RHBDF1-206ENST00000450643 PRPF40BQ6NWY9 871 aaKnown RBP21.32■■□□□ 1
RHBDF1-206ENST00000450643 ANKRD44Q8N8A2 993 aa21.32■■□□□ 1
RHBDF1-206ENST00000450643 GRAPLQ8TC17 118 aaPredicted RBP21.32■■□□□ 1
RHBDF1-206ENST00000450643 RTL9Q8NET4 1388 aa21.32■■□□□ 1
RHBDF1-206ENST00000450643 SRCAPQ6ZRS2 3230 aa21.31■■□□□ 1
RHBDF1-206ENST00000450643 ANKRD18BA2A2Z9 1011 aa21.31■■□□□ 1
RHBDF1-206ENST00000450643 CSF1RP07333 972 aa21.31■■□□□ 1
RHBDF1-206ENST00000450643 ITGA6P23229 1130 aa21.31■■□□□ 1
RHBDF1-206ENST00000450643 IRX6P78412 446 aaPredicted RBP21.31■■□□□ 1
RHBDF1-206ENST00000450643 IFIT5Q13325 482 aaKnown RBP21.31■■□□□ 1
RHBDF1-206ENST00000450643 CCDC57Q2TAC2 916 aa21.31■■□□□ 1
RHBDF1-206ENST00000450643 TAF7LQ5H9L4 462 aa21.31■■□□□ 1
RHBDF1-206ENST00000450643 CDC5LQ99459 802 aaKnown RBP21.31■■□□□ 1
RHBDF1-206ENST00000450643 PPEF1O14829 653 aaPredicted RBP21.3■■□□□ 1
RHBDF1-206ENST00000450643 ANKRD18AQ8IVF6 992 aa21.3■■□□□ 1
RHBDF1-206ENST00000450643 CELF1Q92879 486 aaKnown RBP21.3■■□□□ 1
RHBDF1-206ENST00000450643 GPR162Q16538 588 aa21.29■■□□□ 1
RHBDF1-206ENST00000450643 RABL6Q3YEC7 729 aaPredicted RBP21.29■■□□□ 1
RHBDF1-206ENST00000450643 IGHMBP2P38935 993 aaKnown RBP21.28■■□□□ 1
RHBDF1-206ENST00000450643 TMX4Q9H1E5 349 aaPredicted RBP21.28■■□□□ 1
RHBDF1-206ENST00000450643 LRRC37AA6NMS7 1700 aa21.28■■□□□ 1
RHBDF1-206ENST00000450643 C21orf2O43822 256 aa21.27■■□□□ 1
RHBDF1-206ENST00000450643 RPS8P62241 208 aaKnown RBP21.27■■□□□ 1
RHBDF1-206ENST00000450643 ZBTB40Q9NUA8 1239 aa21.27■■□□□ 1
RHBDF1-206ENST00000450643 DCAF8L1A6NGE4 600 aa21.26■□□□□ 0.99
RHBDF1-206ENST00000450643 SRGAP3O43295 1099 aa21.26■□□□□ 0.99
RHBDF1-206ENST00000450643 BBOX1O75936 387 aa21.26■□□□□ 0.99
RHBDF1-206ENST00000450643 ZNF594Q96JF6 807 aaPredicted RBP21.26■□□□□ 0.99
RHBDF1-206ENST00000450643 MPHOSPH8Q99549 860 aa21.26■□□□□ 0.99
RHBDF1-206ENST00000450643 TMC4Q7Z404 712 aa21.25■□□□□ 0.99
RHBDF1-206ENST00000450643 A0A1B0GUL6 1792 aa21.24■□□□□ 0.99
RHBDF1-206ENST00000450643 YBX3P16989 372 aaKnown RBP eCLIP21.24■□□□□ 0.99
RHBDF1-206ENST00000450643 SOGA3Q5TF21 947 aa21.23■□□□□ 0.99
RHBDF1-206ENST00000450643 OLFM4Q6UX06 510 aa21.23■□□□□ 0.99
RHBDF1-206ENST00000450643 SLC51AQ86UW1 340 aa21.23■□□□□ 0.99
RHBDF1-206ENST00000450643 EXOC6Q8TAG9 804 aa21.23■□□□□ 0.99
RHBDF1-206ENST00000450643 KLHDC4Q8TBB5 520 aa21.23■□□□□ 0.99
RHBDF1-206ENST00000450643 CNNM1Q9NRU3 951 aa21.23■□□□□ 0.99
RHBDF1-206ENST00000450643 ATP6V0A2Q9Y487 856 aa21.23■□□□□ 0.99
RHBDF1-206ENST00000450643 FER1L6Q2WGJ9 1857 aa21.23■□□□□ 0.99
RHBDF1-206ENST00000450643 NEFLP07196 543 aa21.22■□□□□ 0.99
RHBDF1-206ENST00000450643 MTX1Q13505 466 aa21.22■□□□□ 0.99
RHBDF1-206ENST00000450643 CCDC93Q567U6 631 aa21.22■□□□□ 0.99
RHBDF1-206ENST00000450643 CEP85Q6P2H3 762 aa21.22■□□□□ 0.99
RHBDF1-206ENST00000450643 PNMA6EA0A0J9YXQ4 647 aa21.21■□□□□ 0.99
RHBDF1-206ENST00000450643 LDHAL6AQ6ZMR3 332 aa21.21■□□□□ 0.99
RHBDF1-206ENST00000450643 SP8Q8IXZ3 490 aa21.21■□□□□ 0.99
RHBDF1-206ENST00000450643 SIL1Q9H173 461 aa21.21■□□□□ 0.99
RHBDF1-206ENST00000450643 ATP8B2P98198 1209 aa21.2■□□□□ 0.98
RHBDF1-206ENST00000450643 ARHGAP27Q6ZUM4 889 aa21.2■□□□□ 0.98
RHBDF1-206ENST00000450643 BSDC1Q9NW68 430 aaPredicted RBP21.2■□□□□ 0.98
RHBDF1-206ENST00000450643 CCDC88AQ3V6T2 1871 aa21.2■□□□□ 0.98
RHBDF1-206ENST00000450643 HMMRO75330 724 aa21.19■□□□□ 0.98
RHBDF1-206ENST00000450643 RFX5P48382 616 aaPredicted RBP21.19■□□□□ 0.98
RHBDF1-206ENST00000450643 CC2D2BQ6DHV5 1058 aa21.19■□□□□ 0.98
RHBDF1-206ENST00000450643 C7orf43Q8WVR3 580 aa21.19■□□□□ 0.98
RHBDF1-206ENST00000450643 PA2G4Q9UQ80 394 aaKnown RBP21.19■□□□□ 0.98
RHBDF1-206ENST00000450643 GRIN3BO60391 1043 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms