RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-223ENST00000449864 VAMP4O75379 141 aa20.22■□□□□ 0.83
HDLBP-223ENST00000449864 PCCAP05165 728 aaPredicted RBP20.22■□□□□ 0.83
HDLBP-223ENST00000449864 HSPA6P17066 643 aa20.22■□□□□ 0.83
HDLBP-223ENST00000449864 FKBP5Q13451 457 aaPredicted RBP20.22■□□□□ 0.83
HDLBP-223ENST00000449864 JDP2Q8WYK2 163 aa20.22■□□□□ 0.83
HDLBP-223ENST00000449864 COL4A1P02462 1669 aa20.22■□□□□ 0.83
HDLBP-223ENST00000449864 COL4A5P29400 1685 aa20.22■□□□□ 0.83
HDLBP-223ENST00000449864 DDNO94850 711 aaPredicted RBP20.21■□□□□ 0.83
HDLBP-223ENST00000449864 SF3B3Q15393 1217 aaKnown RBP20.21■□□□□ 0.83
HDLBP-223ENST00000449864 TMC4Q7Z404 712 aa20.21■□□□□ 0.83
HDLBP-223ENST00000449864 ZNF521Q96K83 1311 aa20.21■□□□□ 0.83
HDLBP-223ENST00000449864 ZNF541Q9H0D2 1346 aa20.21■□□□□ 0.83
HDLBP-223ENST00000449864 LTBP1Q14766 1721 aa20.2■□□□□ 0.82
HDLBP-223ENST00000449864 DPP8Q6V1X1 898 aaPredicted RBP20.2■□□□□ 0.82
HDLBP-223ENST00000449864 SP8Q8IXZ3 490 aa20.2■□□□□ 0.82
HDLBP-223ENST00000449864 LARGE2Q8N3Y3 721 aa20.2■□□□□ 0.82
HDLBP-223ENST00000449864 SUPT20HQ8NEM7 779 aa20.2■□□□□ 0.82
HDLBP-223ENST00000449864 DUOX1Q9NRD9 1551 aa20.2■□□□□ 0.82
HDLBP-223ENST00000449864 JARID2Q92833 1246 aaPredicted RBP20.19■□□□□ 0.82
HDLBP-223ENST00000449864 PPIP5K2O43314 1243 aa20.18■□□□□ 0.82
HDLBP-223ENST00000449864 PDE8AO60658 829 aa20.18■□□□□ 0.82
HDLBP-223ENST00000449864 IGKV5-2P06315 115 aa20.18■□□□□ 0.82
HDLBP-223ENST00000449864 FSTL1Q12841 308 aa20.18■□□□□ 0.82
HDLBP-223ENST00000449864 CWF19L2Q2TBE0 894 aaKnown RBP20.18■□□□□ 0.82
HDLBP-223ENST00000449864 MPNDQ8N594 471 aa20.18■□□□□ 0.82
HDLBP-223ENST00000449864 CDHR2Q9BYE9 1310 aa20.18■□□□□ 0.82
HDLBP-223ENST00000449864 NEURL1BA8MQ27 555 aa20.17■□□□□ 0.82
HDLBP-223ENST00000449864 CCDC152Q4G0S7 254 aa20.17■□□□□ 0.82
HDLBP-223ENST00000449864 NIM1KQ8IY84 436 aa20.17■□□□□ 0.82
HDLBP-223ENST00000449864 SMC1BQ8NDV3 1235 aa20.17■□□□□ 0.82
HDLBP-223ENST00000449864 DNAAF4Q8WXU2 420 aa20.17■□□□□ 0.82
HDLBP-223ENST00000449864 CELF1Q92879 486 aaKnown RBP20.17■□□□□ 0.82
HDLBP-223ENST00000449864 IQCA1LA6NCM1 817 aa20.16■□□□□ 0.82
HDLBP-223ENST00000449864 POTECB2RU33 542 aa20.16■□□□□ 0.82
HDLBP-223ENST00000449864 FZD9O00144 591 aa20.16■□□□□ 0.82
HDLBP-223ENST00000449864 EIF6P56537 245 aaKnown RBP20.16■□□□□ 0.82
HDLBP-223ENST00000449864 AOC3Q16853 763 aa20.16■□□□□ 0.82
HDLBP-223ENST00000449864 E9PSI1 815 aa20.15■□□□□ 0.82
HDLBP-223ENST00000449864 L3MBTL3Q96JM7 780 aaPredicted RBP20.15■□□□□ 0.82
HDLBP-223ENST00000449864 UBE3BQ7Z3V4 1068 aa20.14■□□□□ 0.81
HDLBP-223ENST00000449864 GPC2Q8N158 579 aa20.14■□□□□ 0.81
HDLBP-223ENST00000449864 LINS1Q8NG48 757 aa20.14■□□□□ 0.81
HDLBP-223ENST00000449864 CCDC85AQ96PX6 553 aaPredicted RBP20.14■□□□□ 0.81
HDLBP-223ENST00000449864 RTFDC1Q9BY42 306 aaPredicted RBP20.14■□□□□ 0.81
HDLBP-223ENST00000449864 VPS33BQ9H267 617 aa20.14■□□□□ 0.81
HDLBP-223ENST00000449864 GJA3Q9Y6H8 435 aa20.14■□□□□ 0.81
HDLBP-223ENST00000449864 APLP1P51693 650 aa20.13■□□□□ 0.81
HDLBP-223ENST00000449864 CTSWP56202 376 aa20.13■□□□□ 0.81
HDLBP-223ENST00000449864 RPS8P62241 208 aaKnown RBP20.13■□□□□ 0.81
HDLBP-223ENST00000449864 SEC31BQ9NQW1 1179 aa20.13■□□□□ 0.81
HDLBP-223ENST00000449864 GCKRQ14397 625 aa20.12■□□□□ 0.81
HDLBP-223ENST00000449864 HACL1Q9UJ83 578 aa20.12■□□□□ 0.81
HDLBP-223ENST00000449864 NSFL1CQ9UNZ2 370 aaKnown RBP20.12■□□□□ 0.81
HDLBP-223ENST00000449864 ADAMTSL1Q8N6G6 1762 aa20.12■□□□□ 0.81
HDLBP-223ENST00000449864 A0A1B0GUL6 1792 aa20.11■□□□□ 0.81
HDLBP-223ENST00000449864 KIAA2012Q0VF49 1180 aa20.11■□□□□ 0.81
HDLBP-223ENST00000449864 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
HDLBP-223ENST00000449864 PSME4Q14997 1843 aa20.11■□□□□ 0.81
HDLBP-223ENST00000449864 F6X3S4 739 aa20.1■□□□□ 0.81
HDLBP-223ENST00000449864 C6orf229H3BNL8 230 aa20.1■□□□□ 0.81
HDLBP-223ENST00000449864 GPSM2P81274 684 aa20.1■□□□□ 0.81
HDLBP-223ENST00000449864 SLFN5Q08AF3 891 aa20.1■□□□□ 0.81
HDLBP-223ENST00000449864 ANKRD18AQ8IVF6 992 aa20.1■□□□□ 0.81
HDLBP-223ENST00000449864 TAF1DQ9H5J8 278 aaPredicted RBP20.1■□□□□ 0.81
HDLBP-223ENST00000449864 ZNRF3Q9ULT6 936 aa20.1■□□□□ 0.81
HDLBP-223ENST00000449864 H7C1W4 665 aa20.09■□□□□ 0.81
HDLBP-223ENST00000449864 LMOD1P29536 600 aaPredicted RBP20.09■□□□□ 0.81
HDLBP-223ENST00000449864 CDC5LQ99459 802 aaKnown RBP20.09■□□□□ 0.81
HDLBP-223ENST00000449864 RTL9Q8NET4 1388 aa20.08■□□□□ 0.81
HDLBP-223ENST00000449864 EPHX2P34913 555 aa20.08■□□□□ 0.81
HDLBP-223ENST00000449864 WASHC4Q2M389 1173 aa20.08■□□□□ 0.81
HDLBP-223ENST00000449864 EAPPQ56P03 285 aaPredicted RBP20.08■□□□□ 0.81
HDLBP-223ENST00000449864 CHADLQ6NUI6 762 aa20.08■□□□□ 0.81
HDLBP-223ENST00000449864 TTLL11Q8NHH1 800 aa20.08■□□□□ 0.81
HDLBP-223ENST00000449864 EYA3Q99504 573 aa20.08■□□□□ 0.81
HDLBP-223ENST00000449864 ANKIB1Q9P2G1 1089 aa20.08■□□□□ 0.81
HDLBP-223ENST00000449864 SLC4A10Q6U841 1118 aa20.07■□□□□ 0.8
HDLBP-223ENST00000449864 GREM2Q9H772 168 aa20.07■□□□□ 0.8
HDLBP-223ENST00000449864 CEP350Q5VT06 3117 aa20.07■□□□□ 0.8
HDLBP-223ENST00000449864 SCN9AQ15858 1988 aa20.06■□□□□ 0.8
HDLBP-223ENST00000449864 POTEIP0CG38 1075 aa20.06■□□□□ 0.8
HDLBP-223ENST00000449864 POTEJP0CG39 1038 aa20.06■□□□□ 0.8
HDLBP-223ENST00000449864 BEND3Q5T5X7 828 aa20.06■□□□□ 0.8
HDLBP-223ENST00000449864 PNMA8AQ86V59 439 aaPredicted RBP20.06■□□□□ 0.8
HDLBP-223ENST00000449864 LDHDQ86WU2 507 aa20.06■□□□□ 0.8
HDLBP-223ENST00000449864 CDCA7LQ96GN5 454 aa20.06■□□□□ 0.8
HDLBP-223ENST00000449864 RIMBP2O15034 1052 aa20.05■□□□□ 0.8
HDLBP-223ENST00000449864 UFL1O94874 794 aa20.05■□□□□ 0.8
HDLBP-223ENST00000449864 TBC1D16Q8TBP0 767 aa20.05■□□□□ 0.8
HDLBP-223ENST00000449864 POLLQ9UGP5 575 aa20.05■□□□□ 0.8
HDLBP-223ENST00000449864 CLEC11AQ9Y240 323 aa20.05■□□□□ 0.8
HDLBP-223ENST00000449864 CASP7P55210 303 aa20.04■□□□□ 0.8
HDLBP-223ENST00000449864 CXCL9Q07325 125 aa20.04■□□□□ 0.8
HDLBP-223ENST00000449864 TNIP1Q15025 636 aa20.04■□□□□ 0.8
HDLBP-223ENST00000449864 CIAPIN1Q6FI81 312 aa20.04■□□□□ 0.8
HDLBP-223ENST00000449864 MIER1Q8N108 512 aa20.04■□□□□ 0.8
HDLBP-223ENST00000449864 GPR101Q96P66 508 aaPredicted RBP20.04■□□□□ 0.8
HDLBP-223ENST00000449864 PLA2G12BQ9BX93 195 aa20.04■□□□□ 0.8
HDLBP-223ENST00000449864 PODXL2Q9NZ53 605 aa20.04■□□□□ 0.8
HDLBP-223ENST00000449864 GGA1Q9UJY5 639 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms