RNA–Protein interactions for RNA: ENST00000449784.5

COPS7B-214, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-214ENST00000449784 WNK3Q9BYP7 1800 aa12.57□□□□□ -0.4
COPS7B-214ENST00000449784 LRRC37A3O60309 1634 aa12.56□□□□□ -0.4
COPS7B-214ENST00000449784 CFAP99D6REC4 459 aa12.56□□□□□ -0.4
COPS7B-214ENST00000449784 IL2RBP14784 551 aa12.56□□□□□ -0.4
COPS7B-214ENST00000449784 PPP2R1AP30153 589 aa12.56□□□□□ -0.4
COPS7B-214ENST00000449784 KRT27Q7Z3Y8 459 aa12.56□□□□□ -0.4
COPS7B-214ENST00000449784 IGSF1Q8N6C5 1336 aa12.56□□□□□ -0.4
COPS7B-214ENST00000449784 TNS2Q63HR2 1409 aa12.55□□□□□ -0.4
COPS7B-214ENST00000449784 TRIM66O15016 1216 aa12.55□□□□□ -0.4
COPS7B-214ENST00000449784 RALBP1Q15311 655 aa12.55□□□□□ -0.4
COPS7B-214ENST00000449784 MEGF6O75095 1541 aa12.55□□□□□ -0.4
COPS7B-214ENST00000449784 IL13P35225 146 aa12.54□□□□□ -0.4
COPS7B-214ENST00000449784 VEGFBP49765 207 aa12.54□□□□□ -0.4
COPS7B-214ENST00000449784 NNTQ13423 1086 aa12.54□□□□□ -0.4
COPS7B-214ENST00000449784 DDB1Q16531 1140 aa12.54□□□□□ -0.4
COPS7B-214ENST00000449784 DESI1Q6ICB0 168 aa12.54□□□□□ -0.4
COPS7B-214ENST00000449784 USHBP1Q8N6Y0 703 aa12.54□□□□□ -0.4
COPS7B-214ENST00000449784 TSC1Q92574 1164 aa12.54□□□□□ -0.4
COPS7B-214ENST00000449784 MAP10Q9P2G4 905 aa12.54□□□□□ -0.4
COPS7B-214ENST00000449784 PLEKHG2Q9H7P9 1386 aa12.54□□□□□ -0.4
COPS7B-214ENST00000449784 OVOS2A0A0G2JMS6 1433 aa12.54□□□□□ -0.4
COPS7B-214ENST00000449784 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
COPS7B-214ENST00000449784 SOCS7O14512 581 aa12.53□□□□□ -0.4
COPS7B-214ENST00000449784 WIPF1O43516 503 aa12.53□□□□□ -0.4
COPS7B-214ENST00000449784 VARSP26640 1264 aaKnown RBP12.53□□□□□ -0.4
COPS7B-214ENST00000449784 KDRP35968 1356 aa12.53□□□□□ -0.4
COPS7B-214ENST00000449784 RGPD2P0DJD1 1756 aa12.53□□□□□ -0.4
COPS7B-214ENST00000449784 RGPD1P0DJD0 1748 aa12.52□□□□□ -0.41
COPS7B-214ENST00000449784 INSM1Q01101 510 aaPredicted RBP12.52□□□□□ -0.41
COPS7B-214ENST00000449784 PDE3BQ13370 1112 aa12.52□□□□□ -0.41
COPS7B-214ENST00000449784 ARID5BQ14865 1188 aa12.52□□□□□ -0.41
COPS7B-214ENST00000449784 LYPD8Q6UX82 237 aa12.52□□□□□ -0.41
COPS7B-214ENST00000449784 ZBTB3Q9H5J0 574 aa12.52□□□□□ -0.41
COPS7B-214ENST00000449784 EXOC5O00471 708 aa12.51□□□□□ -0.41
COPS7B-214ENST00000449784 DIAPH1O60610 1272 aaKnown RBP12.51□□□□□ -0.41
COPS7B-214ENST00000449784 DIXDC1Q155Q3 683 aa12.51□□□□□ -0.41
COPS7B-214ENST00000449784 RIC3Q7Z5B4 369 aa12.51□□□□□ -0.41
COPS7B-214ENST00000449784 RAPGEF4Q8WZA2 1011 aa12.51□□□□□ -0.41
COPS7B-214ENST00000449784 FOXJ1Q92949 421 aa12.51□□□□□ -0.41
COPS7B-214ENST00000449784 ZFP42Q96MM3 310 aa12.51□□□□□ -0.41
COPS7B-214ENST00000449784 PRKRIP1Q9H875 184 aaPredicted RBP12.51□□□□□ -0.41
COPS7B-214ENST00000449784 BCL9O00512 1426 aa12.51□□□□□ -0.41
COPS7B-214ENST00000449784 SPTLC1O15269 473 aa12.5□□□□□ -0.41
COPS7B-214ENST00000449784 TATP17735 454 aaPredicted RBP12.5□□□□□ -0.41
COPS7B-214ENST00000449784 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
COPS7B-214ENST00000449784 NXF1Q9UBU9 619 aaKnown RBP12.5□□□□□ -0.41
COPS7B-214ENST00000449784 MYBBP1AQ9BQG0 1328 aaKnown RBP12.5□□□□□ -0.41
COPS7B-214ENST00000449784 FAM182BQ5T319 152 aa12.49□□□□□ -0.41
COPS7B-214ENST00000449784 AEBP1Q8IUX7 1158 aa12.49□□□□□ -0.41
COPS7B-214ENST00000449784 MARCH10Q8NA82 808 aaPredicted RBP12.49□□□□□ -0.41
COPS7B-214ENST00000449784 SLC16A10Q8TF71 515 aa12.49□□□□□ -0.41
COPS7B-214ENST00000449784 AK7Q96M32 723 aa12.49□□□□□ -0.41
COPS7B-214ENST00000449784 WDR4P57081 412 aaKnown RBP12.48□□□□□ -0.41
COPS7B-214ENST00000449784 AGERQ15109 404 aa12.48□□□□□ -0.41
COPS7B-214ENST00000449784 FAM196AQ6ZSG2 479 aa12.48□□□□□ -0.41
COPS7B-214ENST00000449784 ZCRB1Q8TBF4 217 aaKnown RBP12.48□□□□□ -0.41
COPS7B-214ENST00000449784 STK17AQ9UEE5 414 aa12.48□□□□□ -0.41
COPS7B-214ENST00000449784 GJA5P36382 358 aa12.47□□□□□ -0.41
COPS7B-214ENST00000449784 SULT6B1Q6IMI4 303 aa12.47□□□□□ -0.41
COPS7B-214ENST00000449784 FAM174AQ8TBP5 190 aa12.47□□□□□ -0.41
COPS7B-214ENST00000449784 PURBQ96QR8 312 aaKnown RBP12.47□□□□□ -0.41
COPS7B-214ENST00000449784 PKD1L3Q7Z443 1732 aa12.47□□□□□ -0.41
COPS7B-214ENST00000449784 SHANK3Q9BYB0 1731 aa12.46□□□□□ -0.41
COPS7B-214ENST00000449784 PCDH11XQ9BZA7 1347 aa12.46□□□□□ -0.41
COPS7B-214ENST00000449784 PCDH11YQ9BZA8 1340 aa12.46□□□□□ -0.41
COPS7B-214ENST00000449784 F12P00748 615 aaPredicted RBP12.45□□□□□ -0.42
COPS7B-214ENST00000449784 TIMP2P16035 220 aa12.45□□□□□ -0.42
COPS7B-214ENST00000449784 MRPL14Q6P1L8 145 aaKnown RBP12.45□□□□□ -0.42
COPS7B-214ENST00000449784 CCDC125Q86Z20 511 aa12.45□□□□□ -0.42
COPS7B-214ENST00000449784 LIMD1Q9UGP4 676 aa12.45□□□□□ -0.42
COPS7B-214ENST00000449784 NUDCQ9Y266 331 aa12.45□□□□□ -0.42
COPS7B-214ENST00000449784 SOBPA7XYQ1 873 aa12.44□□□□□ -0.42
COPS7B-214ENST00000449784 U2SURPO15042 1029 aaKnown RBP12.44□□□□□ -0.42
COPS7B-214ENST00000449784 CYP27B1O15528 508 aa12.44□□□□□ -0.42
COPS7B-214ENST00000449784 ADH1CP00326 375 aa12.44□□□□□ -0.42
COPS7B-214ENST00000449784 HMOX1P09601 288 aa12.44□□□□□ -0.42
COPS7B-214ENST00000449784 QPCTQ16769 361 aa12.44□□□□□ -0.42
COPS7B-214ENST00000449784 SPG7Q9UQ90 795 aa12.44□□□□□ -0.42
COPS7B-214ENST00000449784 GMPRP36959 345 aa12.43□□□□□ -0.42
COPS7B-214ENST00000449784 AMOTQ4VCS5 1084 aa12.43□□□□□ -0.42
COPS7B-214ENST00000449784 DDX54Q8TDD1 881 aaKnown RBP12.43□□□□□ -0.42
COPS7B-214ENST00000449784 ANP32CO43423 234 aa12.42□□□□□ -0.42
COPS7B-214ENST00000449784 PDE4DQ08499 809 aa12.42□□□□□ -0.42
COPS7B-214ENST00000449784 SCARF1Q14162 830 aa12.42□□□□□ -0.42
COPS7B-214ENST00000449784 PLEKHO1Q53GL0 409 aaPredicted RBP12.42□□□□□ -0.42
COPS7B-214ENST00000449784 PRPF38BQ5VTL8 546 aaKnown RBP12.42□□□□□ -0.42
COPS7B-214ENST00000449784 MYSM1Q5VVJ2 828 aa12.42□□□□□ -0.42
COPS7B-214ENST00000449784 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
COPS7B-214ENST00000449784 ZFAND3Q9H8U3 227 aa12.42□□□□□ -0.42
COPS7B-214ENST00000449784 TRIM37O94972 964 aa12.41□□□□□ -0.42
COPS7B-214ENST00000449784 U2AF1L5P0DN76 240 aaPredicted RBP12.41□□□□□ -0.42
COPS7B-214ENST00000449784 PHKG2P15735 406 aa12.41□□□□□ -0.42
COPS7B-214ENST00000449784 U2AF1Q01081 240 aaKnown RBP eCLIP12.41□□□□□ -0.42
COPS7B-214ENST00000449784 C4orf48Q5BLP8 95 aa12.41□□□□□ -0.42
COPS7B-214ENST00000449784 IFNL2Q8IZJ0 200 aa12.41□□□□□ -0.42
COPS7B-214ENST00000449784 MPNDQ8N594 471 aa12.41□□□□□ -0.42
COPS7B-214ENST00000449784 TNS1Q9HBL0 1735 aaKnown RBP12.4□□□□□ -0.42
COPS7B-214ENST00000449784 ZIC2O95409 532 aaPredicted RBP12.4□□□□□ -0.42
COPS7B-214ENST00000449784 IRF7Q92985 503 aa12.4□□□□□ -0.42
COPS7B-214ENST00000449784 SLC24A3Q9HC58 644 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms