RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 GREM2Q9H772 168 aa16.91■□□□□ 0.3
SNHG4-201ENST00000448190 RNF181Q9P0P0 153 aa16.91■□□□□ 0.3
SNHG4-201ENST00000448190 NBPF7P0C2Y1 421 aaPredicted RBP16.9■□□□□ 0.3
SNHG4-201ENST00000448190 RPS8P62241 208 aaKnown RBP16.9■□□□□ 0.3
SNHG4-201ENST00000448190 EPHA10Q5JZY3 1008 aa16.9■□□□□ 0.3
SNHG4-201ENST00000448190 TNRC6CQ9HCJ0 1690 aaKnown RBP16.89■□□□□ 0.29
SNHG4-201ENST00000448190 IPO8O15397 1037 aaKnown RBP16.89■□□□□ 0.29
SNHG4-201ENST00000448190 FOXO4P98177 505 aa16.89■□□□□ 0.29
SNHG4-201ENST00000448190 SOGA3Q5TF21 947 aa16.89■□□□□ 0.29
SNHG4-201ENST00000448190 RTKN2Q8IZC4 609 aa16.89■□□□□ 0.29
SNHG4-201ENST00000448190 ZNF526Q8TF50 670 aaPredicted RBP16.89■□□□□ 0.29
SNHG4-201ENST00000448190 TMX4Q9H1E5 349 aaPredicted RBP16.89■□□□□ 0.29
SNHG4-201ENST00000448190 ZNF277Q9NRM2 450 aaPredicted RBP16.89■□□□□ 0.29
SNHG4-201ENST00000448190 CHMP3Q9Y3E7 222 aa16.89■□□□□ 0.29
SNHG4-201ENST00000448190 ATP6V0A2Q9Y487 856 aa16.89■□□□□ 0.29
SNHG4-201ENST00000448190 ARFGEF2Q9Y6D5 1785 aa16.89■□□□□ 0.29
SNHG4-201ENST00000448190 LMNB1P20700 586 aa16.88■□□□□ 0.29
SNHG4-201ENST00000448190 LMBR1LQ6UX01 489 aa16.88■□□□□ 0.29
SNHG4-201ENST00000448190 SP8Q8IXZ3 490 aa16.88■□□□□ 0.29
SNHG4-201ENST00000448190 SUCLG2Q96I99 432 aa16.88■□□□□ 0.29
SNHG4-201ENST00000448190 USP44Q9H0E7 712 aa16.88■□□□□ 0.29
SNHG4-201ENST00000448190 TAOK3Q9H2K8 898 aa16.88■□□□□ 0.29
SNHG4-201ENST00000448190 TRIM27P14373 513 aa16.87■□□□□ 0.29
SNHG4-201ENST00000448190 ATF7IPQ6VMQ6 1270 aa16.87■□□□□ 0.29
SNHG4-201ENST00000448190 ARHGAP45Q92619 1136 aa16.87■□□□□ 0.29
SNHG4-201ENST00000448190 PLA2G12BQ9BX93 195 aa16.87■□□□□ 0.29
SNHG4-201ENST00000448190 KIF16BQ96L93 1317 aa16.87■□□□□ 0.29
SNHG4-201ENST00000448190 COL11A2P13942 1736 aaPredicted RBP16.87■□□□□ 0.29
SNHG4-201ENST00000448190 CSF1RP07333 972 aa16.86■□□□□ 0.29
SNHG4-201ENST00000448190 CCT4P50991 539 aaKnown RBP16.86■□□□□ 0.29
SNHG4-201ENST00000448190 FKBP4Q02790 459 aaKnown RBP eCLIP16.86■□□□□ 0.29
SNHG4-201ENST00000448190 FAM161AQ3B820 660 aa16.86■□□□□ 0.29
SNHG4-201ENST00000448190 ZKSCAN2Q63HK3 967 aa16.86■□□□□ 0.29
SNHG4-201ENST00000448190 KAZALD1Q96I82 304 aa16.86■□□□□ 0.29
SNHG4-201ENST00000448190 SLX4Q8IY92 1834 aa16.85■□□□□ 0.29
SNHG4-201ENST00000448190 ITGA6P23229 1130 aa16.85■□□□□ 0.29
SNHG4-201ENST00000448190 CC2D2BQ6DHV5 1058 aa16.85■□□□□ 0.29
SNHG4-201ENST00000448190 ANKRD18AQ8IVF6 992 aa16.85■□□□□ 0.29
SNHG4-201ENST00000448190 MPNDQ8N594 471 aa16.85■□□□□ 0.29
SNHG4-201ENST00000448190 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
SNHG4-201ENST00000448190 RCAN3Q9UKA8 241 aa16.85■□□□□ 0.29
SNHG4-201ENST00000448190 NSFL1CQ9UNZ2 370 aaKnown RBP16.85■□□□□ 0.29
SNHG4-201ENST00000448190 PLIN1O60240 522 aa16.84■□□□□ 0.29
SNHG4-201ENST00000448190 GPSM2P81274 684 aa16.84■□□□□ 0.29
SNHG4-201ENST00000448190 DPP8Q6V1X1 898 aaPredicted RBP16.84■□□□□ 0.29
SNHG4-201ENST00000448190 WTIPA6NIX2 430 aaPredicted RBP16.83■□□□□ 0.28
SNHG4-201ENST00000448190 UTYO14607 1347 aa16.83■□□□□ 0.28
SNHG4-201ENST00000448190 ANKRD36CQ5JPF3 1778 aa16.83■□□□□ 0.28
SNHG4-201ENST00000448190 INTS3Q68E01 1043 aaKnown RBP16.83■□□□□ 0.28
SNHG4-201ENST00000448190 TMEM57Q8N5G2 664 aa16.83■□□□□ 0.28
SNHG4-201ENST00000448190 ZNF594Q96JF6 807 aaPredicted RBP16.83■□□□□ 0.28
SNHG4-201ENST00000448190 GPR101Q96P66 508 aaPredicted RBP16.83■□□□□ 0.28
SNHG4-201ENST00000448190 CDC5LQ99459 802 aaKnown RBP16.83■□□□□ 0.28
SNHG4-201ENST00000448190 BICC1Q9H694 974 aaKnown RBP16.83■□□□□ 0.28
SNHG4-201ENST00000448190 ANKRD18BA2A2Z9 1011 aa16.82■□□□□ 0.28
SNHG4-201ENST00000448190 C6orf229H3BNL8 230 aa16.82■□□□□ 0.28
SNHG4-201ENST00000448190 RLBP1P12271 317 aa16.82■□□□□ 0.28
SNHG4-201ENST00000448190 IARSP41252 1262 aaKnown RBP16.82■□□□□ 0.28
SNHG4-201ENST00000448190 IFIT5Q13325 482 aaKnown RBP16.82■□□□□ 0.28
SNHG4-201ENST00000448190 TMC4Q7Z404 712 aa16.82■□□□□ 0.28
SNHG4-201ENST00000448190 PSMD1Q99460 953 aa16.82■□□□□ 0.28
SNHG4-201ENST00000448190 MEIS3Q99687 375 aa16.82■□□□□ 0.28
SNHG4-201ENST00000448190 LTBP3Q9NS15 1303 aa16.81■□□□□ 0.28
SNHG4-201ENST00000448190 RIMBP2O15034 1052 aa16.81■□□□□ 0.28
SNHG4-201ENST00000448190 ANKRD44Q8N8A2 993 aa16.81■□□□□ 0.28
SNHG4-201ENST00000448190 PANK1Q8TE04 598 aa16.81■□□□□ 0.28
SNHG4-201ENST00000448190 ANKIB1Q9P2G1 1089 aa16.81■□□□□ 0.28
SNHG4-201ENST00000448190 POLLQ9UGP5 575 aa16.81■□□□□ 0.28
SNHG4-201ENST00000448190 UBTFL1P0CB47 393 aaPredicted RBP16.8■□□□□ 0.28
SNHG4-201ENST00000448190 IGHMBP2P38935 993 aaKnown RBP16.8■□□□□ 0.28
SNHG4-201ENST00000448190 AOC3Q16853 763 aa16.8■□□□□ 0.28
SNHG4-201ENST00000448190 CCDC57Q2TAC2 916 aa16.8■□□□□ 0.28
SNHG4-201ENST00000448190 GRIPAP1Q4V328 841 aa16.8■□□□□ 0.28
SNHG4-201ENST00000448190 TAF7LQ5H9L4 462 aa16.8■□□□□ 0.28
SNHG4-201ENST00000448190 FTSJ3Q8IY81 847 aaKnown RBP16.8■□□□□ 0.28
SNHG4-201ENST00000448190 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
SNHG4-201ENST00000448190 LARGE2Q8N3Y3 721 aa16.8■□□□□ 0.28
SNHG4-201ENST00000448190 MPHOSPH8Q99549 860 aa16.8■□□□□ 0.28
SNHG4-201ENST00000448190 BSDC1Q9NW68 430 aaPredicted RBP16.8■□□□□ 0.28
SNHG4-201ENST00000448190 MINPP1Q9UNW1 487 aa16.8■□□□□ 0.28
SNHG4-201ENST00000448190 COL4A1P02462 1669 aa16.8■□□□□ 0.28
SNHG4-201ENST00000448190 PPIP5K2O43314 1243 aa16.79■□□□□ 0.28
SNHG4-201ENST00000448190 HELBQ8NG08 1087 aaPredicted RBP16.79■□□□□ 0.28
SNHG4-201ENST00000448190 LRRFIP2Q9Y608 721 aaKnown RBP16.79■□□□□ 0.28
SNHG4-201ENST00000448190 BRCA1P38398 1863 aaKnown RBP16.79■□□□□ 0.28
SNHG4-201ENST00000448190 SUPT20HQ8NEM7 779 aa16.78■□□□□ 0.28
SNHG4-201ENST00000448190 KLHDC4Q8TBB5 520 aa16.78■□□□□ 0.28
SNHG4-201ENST00000448190 TBC1D16Q8TBP0 767 aa16.78■□□□□ 0.28
SNHG4-201ENST00000448190 RTFDC1Q9BY42 306 aaPredicted RBP16.78■□□□□ 0.28
SNHG4-201ENST00000448190 PUS3Q9BZE2 481 aaKnown RBP16.78■□□□□ 0.28
SNHG4-201ENST00000448190 RTL9Q8NET4 1388 aa16.77■□□□□ 0.28
SNHG4-201ENST00000448190 DDX60Q8IY21 1712 aaKnown RBP16.77■□□□□ 0.28
SNHG4-201ENST00000448190 SNAP23O00161 211 aa16.77■□□□□ 0.28
SNHG4-201ENST00000448190 UFL1O94874 794 aa16.77■□□□□ 0.28
SNHG4-201ENST00000448190 DOK7Q18PE1 504 aa16.77■□□□□ 0.28
SNHG4-201ENST00000448190 WASHC4Q2M389 1173 aa16.77■□□□□ 0.28
SNHG4-201ENST00000448190 LDHAL6AQ6ZMR3 332 aa16.77■□□□□ 0.28
SNHG4-201ENST00000448190 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.28
SNHG4-201ENST00000448190 JDP2Q8WYK2 163 aa16.77■□□□□ 0.28
SNHG4-201ENST00000448190 GPBP1L1Q9HC44 474 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms