RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 DZIP3Q86Y13 1208 aaKnown RBP23.5■■□□□ 1.35
FAM3A-215ENST00000447601 NEUROD6Q96NK8 337 aa23.5■■□□□ 1.35
FAM3A-215ENST00000447601 ZNF609O15014 1411 aa23.5■■□□□ 1.35
FAM3A-215ENST00000447601 A0A0D9SFI3 127 aa23.49■■□□□ 1.35
FAM3A-215ENST00000447601 TRAK2O60296 914 aa23.49■■□□□ 1.35
FAM3A-215ENST00000447601 MAP4K1Q92918 833 aa23.49■■□□□ 1.35
FAM3A-215ENST00000447601 ZKSCAN1P17029 563 aaPredicted RBP23.49■■□□□ 1.35
FAM3A-215ENST00000447601 GPTP24298 496 aa23.49■■□□□ 1.35
FAM3A-215ENST00000447601 PRPF40BQ6NWY9 871 aaKnown RBP23.49■■□□□ 1.35
FAM3A-215ENST00000447601 TICAM2Q86XR7 235 aa23.49■■□□□ 1.35
FAM3A-215ENST00000447601 ACSBG1Q96GR2 724 aa23.49■■□□□ 1.35
FAM3A-215ENST00000447601 DNAJC2Q99543 621 aaKnown RBP23.49■■□□□ 1.35
FAM3A-215ENST00000447601 TM6SF1Q9BZW5 370 aa23.49■■□□□ 1.35
FAM3A-215ENST00000447601 CEP126Q9P2H0 1117 aa23.49■■□□□ 1.35
FAM3A-215ENST00000447601 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.48■■□□□ 1.35
FAM3A-215ENST00000447601 A0A0G2JS52 829 aa23.48■■□□□ 1.35
FAM3A-215ENST00000447601 KCNJ4P48050 445 aa23.48■■□□□ 1.35
FAM3A-215ENST00000447601 IFIT5Q13325 482 aaKnown RBP23.48■■□□□ 1.35
FAM3A-215ENST00000447601 NECTIN1Q15223 517 aa23.48■■□□□ 1.35
FAM3A-215ENST00000447601 TAF7LQ5H9L4 462 aa23.48■■□□□ 1.35
FAM3A-215ENST00000447601 EDC3Q96F86 508 aaKnown RBP23.48■■□□□ 1.35
FAM3A-215ENST00000447601 RBM8AQ9Y5S9 174 aaKnown RBP23.48■■□□□ 1.35
FAM3A-215ENST00000447601 GOLGA6L22H0YM25 854 aa23.47■■□□□ 1.35
FAM3A-215ENST00000447601 TTC14Q96N46 770 aa23.47■■□□□ 1.35
FAM3A-215ENST00000447601 CCDC87Q9NVE4 849 aa23.47■■□□□ 1.35
FAM3A-215ENST00000447601 AKAP2Q9Y2D5 859 aa23.47■■□□□ 1.35
FAM3A-215ENST00000447601 PUS3Q9BZE2 481 aaKnown RBP23.47■■□□□ 1.35
FAM3A-215ENST00000447601 LOC102724428A0A0B4J2F2 783 aa23.46■■□□□ 1.35
FAM3A-215ENST00000447601 A0A1B0GUL7 405 aa23.46■■□□□ 1.35
FAM3A-215ENST00000447601 UBAP1LF5GYI3 381 aa23.46■■□□□ 1.35
FAM3A-215ENST00000447601 ATP6V1AP38606 617 aa23.46■■□□□ 1.35
FAM3A-215ENST00000447601 EIF5P55010 431 aaKnown RBP23.46■■□□□ 1.35
FAM3A-215ENST00000447601 SIK1P57059 783 aa23.46■■□□□ 1.35
FAM3A-215ENST00000447601 TIMM10P62072 90 aa23.46■■□□□ 1.35
FAM3A-215ENST00000447601 RNF20Q5VTR2 975 aa23.46■■□□□ 1.35
FAM3A-215ENST00000447601 NOL8Q76FK4 1167 aaKnown RBP23.46■■□□□ 1.35
FAM3A-215ENST00000447601 JCADQ9P266 1359 aa23.46■■□□□ 1.35
FAM3A-215ENST00000447601 CASTP20810 708 aaKnown RBP23.45■■□□□ 1.34
FAM3A-215ENST00000447601 CREB3L3Q68CJ9 461 aa23.45■■□□□ 1.34
FAM3A-215ENST00000447601 KBTBD3Q8NAB2 608 aa23.45■■□□□ 1.34
FAM3A-215ENST00000447601 SMARCC1Q92922 1105 aaPredicted RBP23.45■■□□□ 1.34
FAM3A-215ENST00000447601 TRMT112Q9UI30 125 aaKnown RBP23.45■■□□□ 1.34
FAM3A-215ENST00000447601 CTSWP56202 376 aa23.45■■□□□ 1.34
FAM3A-215ENST00000447601 SKOR2Q2VWA4 1001 aaPredicted RBP23.45■■□□□ 1.34
FAM3A-215ENST00000447601 INTS5Q6P9B9 1019 aaKnown RBP23.45■■□□□ 1.34
FAM3A-215ENST00000447601 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.45■■□□□ 1.34
FAM3A-215ENST00000447601 TBC1D2BQ9UPU7 963 aa23.45■■□□□ 1.34
FAM3A-215ENST00000447601 BAG4O95429 457 aaKnown RBP23.44■■□□□ 1.34
FAM3A-215ENST00000447601 CRKLP46109 303 aaKnown RBP23.44■■□□□ 1.34
FAM3A-215ENST00000447601 JAKMIP1Q96N16 626 aaKnown RBP23.44■■□□□ 1.34
FAM3A-215ENST00000447601 ZSWIM6Q9HCJ5 1215 aa23.44■■□□□ 1.34
FAM3A-215ENST00000447601 PALLDQ8WX93 1383 aa23.44■■□□□ 1.34
FAM3A-215ENST00000447601 IRS4O14654 1257 aaPredicted RBP23.43■■□□□ 1.34
FAM3A-215ENST00000447601 DDX46Q7L014 1031 aaKnown RBP23.43■■□□□ 1.34
FAM3A-215ENST00000447601 ZNF34Q8IZ26 560 aa23.43■■□□□ 1.34
FAM3A-215ENST00000447601 TTLL11Q8NHH1 800 aa23.43■■□□□ 1.34
FAM3A-215ENST00000447601 PAG1Q9NWQ8 432 aa23.43■■□□□ 1.34
FAM3A-215ENST00000447601 LIMCH1Q9UPQ0 1083 aa23.43■■□□□ 1.34
FAM3A-215ENST00000447601 CYP46A1Q9Y6A2 500 aa23.43■■□□□ 1.34
FAM3A-215ENST00000447601 PSMA5P28066 241 aa23.43■■□□□ 1.34
FAM3A-215ENST00000447601 AK2P54819 239 aa23.43■■□□□ 1.34
FAM3A-215ENST00000447601 VPS72Q15906 364 aa23.43■■□□□ 1.34
FAM3A-215ENST00000447601 VPS53Q5VIR6 699 aa23.43■■□□□ 1.34
FAM3A-215ENST00000447601 ZNF589Q86UQ0 364 aaPredicted RBP23.43■■□□□ 1.34
FAM3A-215ENST00000447601 HMG20BQ9P0W2 317 aa23.43■■□□□ 1.34
FAM3A-215ENST00000447601 NDUFB9Q9Y6M9 179 aa23.43■■□□□ 1.34
FAM3A-215ENST00000447601 SLC27A2O14975 620 aa23.42■■□□□ 1.34
FAM3A-215ENST00000447601 TAF5LO75529 589 aa23.42■■□□□ 1.34
FAM3A-215ENST00000447601 PKP1Q13835 747 aa23.42■■□□□ 1.34
FAM3A-215ENST00000447601 CCDC85AQ96PX6 553 aaPredicted RBP23.42■■□□□ 1.34
FAM3A-215ENST00000447601 ANKRD18BA2A2Z9 1011 aa23.41■■□□□ 1.34
FAM3A-215ENST00000447601 PDE8AO60658 829 aa23.41■■□□□ 1.34
FAM3A-215ENST00000447601 IFIT1P09914 478 aaKnown RBP23.41■■□□□ 1.34
FAM3A-215ENST00000447601 ITGA6P23229 1130 aa23.41■■□□□ 1.34
FAM3A-215ENST00000447601 MCMDC2Q4G0Z9 681 aa23.41■■□□□ 1.34
FAM3A-215ENST00000447601 SYNE4Q8N205 404 aa23.41■■□□□ 1.34
FAM3A-215ENST00000447601 AK7Q96M32 723 aa23.41■■□□□ 1.34
FAM3A-215ENST00000447601 PDRG1Q9NUG6 133 aa23.41■■□□□ 1.34
FAM3A-215ENST00000447601 CICQ96RK0 1608 aaPredicted RBP23.41■■□□□ 1.34
FAM3A-215ENST00000447601 ANKRD36CQ5JPF3 1778 aa23.41■■□□□ 1.34
FAM3A-215ENST00000447601 GOLIM4O00461 696 aa23.4■■□□□ 1.34
FAM3A-215ENST00000447601 ADCK5Q3MIX3 580 aa23.4■■□□□ 1.34
FAM3A-215ENST00000447601 CCDC158Q5M9N0 1113 aa23.4■■□□□ 1.34
FAM3A-215ENST00000447601 NGLY1Q96IV0 654 aa23.4■■□□□ 1.34
FAM3A-215ENST00000447601 UBN2Q6ZU65 1347 aa23.4■■□□□ 1.34
FAM3A-215ENST00000447601 SH3TC1Q8TE82 1336 aa23.4■■□□□ 1.34
FAM3A-215ENST00000447601 FAM98CQ17RN3 349 aaKnown RBP23.4■■□□□ 1.34
FAM3A-215ENST00000447601 RUFY3Q7L099 469 aa23.4■■□□□ 1.34
FAM3A-215ENST00000447601 C8orf37Q96NL8 207 aa23.4■■□□□ 1.34
FAM3A-215ENST00000447601 GREM2Q9H772 168 aa23.4■■□□□ 1.34
FAM3A-215ENST00000447601 RPAP1Q9BWH6 1393 aaPredicted RBP23.39■■□□□ 1.34
FAM3A-215ENST00000447601 ITPK1Q13572 414 aa23.39■■□□□ 1.33
FAM3A-215ENST00000447601 GORABQ5T7V8 394 aa23.39■■□□□ 1.33
FAM3A-215ENST00000447601 USPL1Q5W0Q7 1092 aa23.39■■□□□ 1.33
FAM3A-215ENST00000447601 ZDHHC9Q9Y397 364 aa23.39■■□□□ 1.33
FAM3A-215ENST00000447601 TSGA10IPQ3SY00 556 aa23.38■■□□□ 1.33
FAM3A-215ENST00000447601 LDHAL6AQ6ZMR3 332 aa23.38■■□□□ 1.33
FAM3A-215ENST00000447601 BCL9LQ86UU0 1499 aa23.38■■□□□ 1.33
FAM3A-215ENST00000447601 METTL24Q5JXM2 366 aa23.38■■□□□ 1.33
FAM3A-215ENST00000447601 XAGE2Q96GT9 111 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms