RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 EFCC1Q9HA90 598 aa7.26□□□□□ -1.25
HMGB1P16-201ENST00000447155 ABI2Q9NYB9 513 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P16-201ENST00000447155 TMEM63CQ9P1W3 806 aa7.26□□□□□ -1.25
HMGB1P16-201ENST00000447155 KIAA1522Q9P206 1035 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P16-201ENST00000447155 WWC3Q9ULE0 1092 aa7.26□□□□□ -1.25
HMGB1P16-201ENST00000447155 SASH3O75995 380 aa7.25□□□□□ -1.25
HMGB1P16-201ENST00000447155 VAMP1P23763 118 aa7.25□□□□□ -1.25
HMGB1P16-201ENST00000447155 ITGAEP38570 1179 aa7.25□□□□□ -1.25
HMGB1P16-201ENST00000447155 XPCQ01831 940 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P16-201ENST00000447155 NANOS1Q8WY41 292 aaKnown RBP7.25□□□□□ -1.25
HMGB1P16-201ENST00000447155 PMEPA1Q969W9 287 aa7.25□□□□□ -1.25
HMGB1P16-201ENST00000447155 TRERF1Q96PN7 1200 aa7.25□□□□□ -1.25
HMGB1P16-201ENST00000447155 DUSP9Q99956 384 aaKnown RBP7.25□□□□□ -1.25
HMGB1P16-201ENST00000447155 ZFYVE28Q9HCC9 887 aa7.25□□□□□ -1.25
HMGB1P16-201ENST00000447155 STRN4Q9NRL3 753 aa7.25□□□□□ -1.25
HMGB1P16-201ENST00000447155 CD33P20138 364 aa7.24□□□□□ -1.25
HMGB1P16-201ENST00000447155 SPEM2Q0P670 501 aa7.24□□□□□ -1.25
HMGB1P16-201ENST00000447155 FAM182BQ5T319 152 aa7.24□□□□□ -1.25
HMGB1P16-201ENST00000447155 TTC39BQ5VTQ0 682 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P16-201ENST00000447155 PNMA5Q96PV4 448 aa7.24□□□□□ -1.25
HMGB1P16-201ENST00000447155 SETDB2Q96T68 719 aa7.24□□□□□ -1.25
HMGB1P16-201ENST00000447155 PARP2Q9UGN5 583 aa7.24□□□□□ -1.25
HMGB1P16-201ENST00000447155 CDC14CA4D256 554 aa7.23□□□□□ -1.25
HMGB1P16-201ENST00000447155 FGFR3P22607 806 aa7.23□□□□□ -1.25
HMGB1P16-201ENST00000447155 SV2AQ7L0J3 742 aa7.23□□□□□ -1.25
HMGB1P16-201ENST00000447155 KRT25Q7Z3Z0 450 aa7.23□□□□□ -1.25
HMGB1P16-201ENST00000447155 VWA5B2Q8N398 1253 aa7.23□□□□□ -1.25
HMGB1P16-201ENST00000447155 FRMD6Q96NE9 622 aa7.23□□□□□ -1.25
HMGB1P16-201ENST00000447155 CHRDQ9H2X0 955 aa7.23□□□□□ -1.25
HMGB1P16-201ENST00000447155 CNTN3Q9P232 1028 aa7.23□□□□□ -1.25
HMGB1P16-201ENST00000447155 HCN2Q9UL51 889 aa7.23□□□□□ -1.25
HMGB1P16-201ENST00000447155 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P16-201ENST00000447155 MAP3K6O95382 1288 aa7.22□□□□□ -1.25
HMGB1P16-201ENST00000447155 RARAP10276 462 aa7.22□□□□□ -1.25
HMGB1P16-201ENST00000447155 TARSP26639 723 aaKnown RBP7.22□□□□□ -1.25
HMGB1P16-201ENST00000447155 GNA15P30679 374 aa7.22□□□□□ -1.25
HMGB1P16-201ENST00000447155 DAB2P98082 770 aa7.22□□□□□ -1.25
HMGB1P16-201ENST00000447155 GRIN2CQ14957 1233 aa7.22□□□□□ -1.25
HMGB1P16-201ENST00000447155 USPL1Q5W0Q7 1092 aa7.22□□□□□ -1.25
HMGB1P16-201ENST00000447155 TMC4Q7Z404 712 aa7.22□□□□□ -1.25
HMGB1P16-201ENST00000447155 C1orf127Q8N9H9 656 aa7.22□□□□□ -1.25
HMGB1P16-201ENST00000447155 CCDC74AQ96AQ1 378 aa7.22□□□□□ -1.25
HMGB1P16-201ENST00000447155 SLC30A3Q99726 388 aa7.22□□□□□ -1.25
HMGB1P16-201ENST00000447155 POTECB2RU33 542 aa7.21□□□□□ -1.26
HMGB1P16-201ENST00000447155 EREGO14944 169 aa7.21□□□□□ -1.26
HMGB1P16-201ENST00000447155 MMP20O60882 483 aa7.21□□□□□ -1.26
HMGB1P16-201ENST00000447155 NFKB1P19838 968 aa7.21□□□□□ -1.26
HMGB1P16-201ENST00000447155 CES1P23141 567 aa7.21□□□□□ -1.26
HMGB1P16-201ENST00000447155 PSMD2Q13200 908 aa7.21□□□□□ -1.26
HMGB1P16-201ENST00000447155 NEUROD1Q13562 356 aa7.21□□□□□ -1.26
HMGB1P16-201ENST00000447155 MRPL58Q14197 206 aaKnown RBP7.21□□□□□ -1.26
HMGB1P16-201ENST00000447155 OR13H1Q8NG92 308 aa7.21□□□□□ -1.26
HMGB1P16-201ENST00000447155 BHMTQ93088 406 aa7.21□□□□□ -1.26
HMGB1P16-201ENST00000447155 ZFATQ9P243 1243 aa7.21□□□□□ -1.26
HMGB1P16-201ENST00000447155 PHF20L1A8MW92 1017 aa7.2□□□□□ -1.26
HMGB1P16-201ENST00000447155 GPR25O00155 361 aa7.2□□□□□ -1.26
HMGB1P16-201ENST00000447155 SORBS3O60504 671 aa7.2□□□□□ -1.26
HMGB1P16-201ENST00000447155 GALNT12Q8IXK2 581 aa7.2□□□□□ -1.26
HMGB1P16-201ENST00000447155 MRS2Q9HD23 443 aa7.2□□□□□ -1.26
HMGB1P16-201ENST00000447155 TLR7Q9NYK1 1049 aaKnown RBP7.2□□□□□ -1.26
HMGB1P16-201ENST00000447155 SPG7Q9UQ90 795 aa7.2□□□□□ -1.26
HMGB1P16-201ENST00000447155 GIPC1O14908 333 aa7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 CYP2E1P05181 493 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 PSAPP07602 524 aa7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 HOXD8P13378 290 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 SOX18P35713 384 aa7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 VEGFBP49765 207 aa7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 CTBSQ01459 385 aa7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 NPAS3Q8IXF0 933 aa7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 FAM161BQ96MY7 647 aa7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 RNF19AQ9NV58 838 aa7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 NLRP2Q9NX02 1062 aa7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 NXF1Q9UBU9 619 aaKnown RBP7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 PRR12Q9ULL5 1215 aa7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 AK5Q9Y6K8 562 aa7.19□□□□□ -1.26
HMGB1P16-201ENST00000447155 RECKO95980 971 aa7.18□□□□□ -1.26
HMGB1P16-201ENST00000447155 POLR3DP05423 398 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P16-201ENST00000447155 EDN3P14138 238 aa7.18□□□□□ -1.26
HMGB1P16-201ENST00000447155 PLAURQ03405 335 aa7.18□□□□□ -1.26
HMGB1P16-201ENST00000447155 RAB44Q7Z6P3 723 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P16-201ENST00000447155 EPS8L3Q8TE67 593 aaKnown RBP7.18□□□□□ -1.26
HMGB1P16-201ENST00000447155 NPHS2Q9NP85 383 aa7.18□□□□□ -1.26
HMGB1P16-201ENST00000447155 IGSF5Q9NSI5 407 aa7.18□□□□□ -1.26
HMGB1P16-201ENST00000447155 KANSL3Q9P2N6 904 aa7.18□□□□□ -1.26
HMGB1P16-201ENST00000447155 KIF4AO95239 1232 aa7.17□□□□□ -1.26
HMGB1P16-201ENST00000447155 BMP4P12644 408 aa7.17□□□□□ -1.26
HMGB1P16-201ENST00000447155 IRS1P35568 1242 aa7.17□□□□□ -1.26
HMGB1P16-201ENST00000447155 HYAL2Q12891 473 aa7.17□□□□□ -1.26
HMGB1P16-201ENST00000447155 TSNAXIP1Q2TAA8 658 aa7.17□□□□□ -1.26
HMGB1P16-201ENST00000447155 ZNF468Q5VIY5 522 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P16-201ENST00000447155 DHX32Q7L7V1 743 aaKnown RBP7.17□□□□□ -1.26
HMGB1P16-201ENST00000447155 VTI1BQ9UEU0 232 aa7.17□□□□□ -1.26
HMGB1P16-201ENST00000447155 SALL4Q9UJQ4 1053 aa7.17□□□□□ -1.26
HMGB1P16-201ENST00000447155 GADD45BO75293 160 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P16-201ENST00000447155 NRLP54845 237 aa7.16□□□□□ -1.26
HMGB1P16-201ENST00000447155 PI16Q6UXB8 463 aa7.16□□□□□ -1.26
HMGB1P16-201ENST00000447155 BACH2Q9BYV9 841 aa7.16□□□□□ -1.26
HMGB1P16-201ENST00000447155 AVENQ9NQS1 362 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P16-201ENST00000447155 H3BM21 787 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms