RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CDHR2Q9BYE9 1310 aa21.09■□□□□ 0.97
SMC6-206ENST00000446852 CSF1RP07333 972 aa21.09■□□□□ 0.97
SMC6-206ENST00000446852 MCM2P49736 904 aa21.09■□□□□ 0.97
SMC6-206ENST00000446852 CCDC57Q2TAC2 916 aa21.09■□□□□ 0.97
SMC6-206ENST00000446852 INTS5Q6P9B9 1019 aaKnown RBP21.09■□□□□ 0.97
SMC6-206ENST00000446852 C8orf37Q96NL8 207 aa21.09■□□□□ 0.97
SMC6-206ENST00000446852 COL5A3P25940 1745 aaPredicted RBP21.08■□□□□ 0.97
SMC6-206ENST00000446852 SSFA2P28290 1259 aa21.08■□□□□ 0.97
SMC6-206ENST00000446852 TIMM10P62072 90 aa21.08■□□□□ 0.97
SMC6-206ENST00000446852 MED23Q9ULK4 1368 aa21.08■□□□□ 0.96
SMC6-206ENST00000446852 LOC102724428A0A0B4J2F2 783 aa21.07■□□□□ 0.96
SMC6-206ENST00000446852 ATP6V1AP38606 617 aa21.07■□□□□ 0.96
SMC6-206ENST00000446852 SIK1P57059 783 aa21.07■□□□□ 0.96
SMC6-206ENST00000446852 FAM98CQ17RN3 349 aaKnown RBP21.07■□□□□ 0.96
SMC6-206ENST00000446852 NEUROD6Q96NK8 337 aa21.07■□□□□ 0.96
SMC6-206ENST00000446852 ERVV-1B6SEH8 477 aa21.07■□□□□ 0.96
SMC6-206ENST00000446852 EIF5P55010 431 aaKnown RBP21.07■□□□□ 0.96
SMC6-206ENST00000446852 ITPK1Q13572 414 aa21.07■□□□□ 0.96
SMC6-206ENST00000446852 HAUS7Q99871 368 aa21.07■□□□□ 0.96
SMC6-206ENST00000446852 PALLDQ8WX93 1383 aa21.07■□□□□ 0.96
SMC6-206ENST00000446852 JCADQ9P266 1359 aa21.07■□□□□ 0.96
SMC6-206ENST00000446852 KCNQ2O43526 872 aa21.06■□□□□ 0.96
SMC6-206ENST00000446852 CRKLP46109 303 aaKnown RBP21.06■□□□□ 0.96
SMC6-206ENST00000446852 NOL8Q76FK4 1167 aaKnown RBP21.06■□□□□ 0.96
SMC6-206ENST00000446852 DNAJC2Q99543 621 aaKnown RBP21.06■□□□□ 0.96
SMC6-206ENST00000446852 CCDC87Q9NVE4 849 aa21.06■□□□□ 0.96
SMC6-206ENST00000446852 UBN2Q6ZU65 1347 aa21.06■□□□□ 0.96
SMC6-206ENST00000446852 NGLY1Q96IV0 654 aa21.06■□□□□ 0.96
SMC6-206ENST00000446852 A0A1B0GUL7 405 aa21.04■□□□□ 0.96
SMC6-206ENST00000446852 CUL4AQ13619 759 aa21.04■□□□□ 0.96
SMC6-206ENST00000446852 PKP1Q13835 747 aa21.04■□□□□ 0.96
SMC6-206ENST00000446852 NECTIN1Q15223 517 aa21.04■□□□□ 0.96
SMC6-206ENST00000446852 VPS72Q15906 364 aa21.04■□□□□ 0.96
SMC6-206ENST00000446852 PRPF40BQ6NWY9 871 aaKnown RBP21.04■□□□□ 0.96
SMC6-206ENST00000446852 KCNB2Q92953 911 aa21.04■□□□□ 0.96
SMC6-206ENST00000446852 CWC22Q9HCG8 908 aaKnown RBP21.04■□□□□ 0.96
SMC6-206ENST00000446852 RFX7Q2KHR2 1363 aa21.04■□□□□ 0.96
SMC6-206ENST00000446852 ZNF589Q86UQ0 364 aaPredicted RBP21.04■□□□□ 0.96
SMC6-206ENST00000446852 ZNF34Q8IZ26 560 aa21.04■□□□□ 0.96
SMC6-206ENST00000446852 TTLL11Q8NHH1 800 aa21.04■□□□□ 0.96
SMC6-206ENST00000446852 MAP4K1Q92918 833 aa21.04■□□□□ 0.96
SMC6-206ENST00000446852 TTC14Q96N46 770 aa21.04■□□□□ 0.96
SMC6-206ENST00000446852 TRMT112Q9UI30 125 aaKnown RBP21.04■□□□□ 0.96
SMC6-206ENST00000446852 RBM8AQ9Y5S9 174 aaKnown RBP21.04■□□□□ 0.96
SMC6-206ENST00000446852 CHGBP05060 677 aa21.03■□□□□ 0.96
SMC6-206ENST00000446852 CYP2E1P05181 493 aaPredicted RBP21.03■□□□□ 0.96
SMC6-206ENST00000446852 IFIT5Q13325 482 aaKnown RBP21.03■□□□□ 0.96
SMC6-206ENST00000446852 DDX46Q7L014 1031 aaKnown RBP21.03■□□□□ 0.96
SMC6-206ENST00000446852 FBXO3Q9UK99 471 aa21.03■□□□□ 0.96
SMC6-206ENST00000446852 ZNF831Q5JPB2 1677 aa21.03■□□□□ 0.96
SMC6-206ENST00000446852 GREM2Q9H772 168 aa21.03■□□□□ 0.96
SMC6-206ENST00000446852 CEP126Q9P2H0 1117 aa21.03■□□□□ 0.96
SMC6-206ENST00000446852 RIC1Q4ADV7 1423 aa21.03■□□□□ 0.96
SMC6-206ENST00000446852 DDX11L8A8MPP1 907 aa21.02■□□□□ 0.96
SMC6-206ENST00000446852 IRS4O14654 1257 aaPredicted RBP21.02■□□□□ 0.96
SMC6-206ENST00000446852 CTSWP56202 376 aa21.02■□□□□ 0.96
SMC6-206ENST00000446852 ADCK5Q3MIX3 580 aa21.02■□□□□ 0.96
SMC6-206ENST00000446852 GBP4Q96PP9 640 aa21.02■□□□□ 0.96
SMC6-206ENST00000446852 SPEF2Q9C093 1822 aa21.02■□□□□ 0.96
SMC6-206ENST00000446852 CPA1P15085 419 aa21.01■□□□□ 0.95
SMC6-206ENST00000446852 ITGA6P23229 1130 aa21.01■□□□□ 0.95
SMC6-206ENST00000446852 NUCB2P80303 420 aa21.01■□□□□ 0.95
SMC6-206ENST00000446852 TAF7LQ5H9L4 462 aa21.01■□□□□ 0.95
SMC6-206ENST00000446852 IL27Q8NEV9 243 aa21.01■□□□□ 0.95
SMC6-206ENST00000446852 BCORQ6W2J9 1755 aa21.01■□□□□ 0.95
SMC6-206ENST00000446852 DDX60Q8IY21 1712 aaKnown RBP21■□□□□ 0.95
SMC6-206ENST00000446852 CASTP20810 708 aaKnown RBP21■□□□□ 0.95
SMC6-206ENST00000446852 CREB3L3Q68CJ9 461 aa21■□□□□ 0.95
SMC6-206ENST00000446852 CLEC17AQ6ZS10 378 aa21■□□□□ 0.95
SMC6-206ENST00000446852 FNBP4Q8N3X1 1017 aaPredicted RBP21■□□□□ 0.95
SMC6-206ENST00000446852 KBTBD3Q8NAB2 608 aa21■□□□□ 0.95
SMC6-206ENST00000446852 PAG1Q9NWQ8 432 aa21■□□□□ 0.95
SMC6-206ENST00000446852 GOLIM4O00461 696 aa20.99■□□□□ 0.95
SMC6-206ENST00000446852 AK2P54819 239 aa20.99■□□□□ 0.95
SMC6-206ENST00000446852 JAKMIP1Q96N16 626 aaKnown RBP20.99■□□□□ 0.95
SMC6-206ENST00000446852 TRAK2O60296 914 aa20.99■□□□□ 0.95
SMC6-206ENST00000446852 TAF5LO75529 589 aa20.99■□□□□ 0.95
SMC6-206ENST00000446852 CAMTA2O94983 1202 aa20.99■□□□□ 0.95
SMC6-206ENST00000446852 ADORA1P30542 326 aa20.99■□□□□ 0.95
SMC6-206ENST00000446852 KCNJ4P48050 445 aa20.99■□□□□ 0.95
SMC6-206ENST00000446852 SMARCC1Q92922 1105 aaPredicted RBP20.99■□□□□ 0.95
SMC6-206ENST00000446852 ZDHHC9Q9Y397 364 aa20.99■□□□□ 0.95
SMC6-206ENST00000446852 THSD7AQ9UPZ6 1657 aa20.99■□□□□ 0.95
SMC6-206ENST00000446852 PDE8AO60658 829 aa20.98■□□□□ 0.95
SMC6-206ENST00000446852 INTS4Q96HW7 963 aaKnown RBP20.98■□□□□ 0.95
SMC6-206ENST00000446852 SEC62Q99442 399 aaKnown RBP20.98■□□□□ 0.95
SMC6-206ENST00000446852 RIPOR2Q9Y4F9 1068 aa20.98■□□□□ 0.95
SMC6-206ENST00000446852 LRP5O75197 1615 aa20.98■□□□□ 0.95
SMC6-206ENST00000446852 SLC27A2O14975 620 aa20.98■□□□□ 0.95
SMC6-206ENST00000446852 TM6SF1Q9BZW5 370 aa20.98■□□□□ 0.95
SMC6-206ENST00000446852 LAMB2P55268 1798 aa20.97■□□□□ 0.95
SMC6-206ENST00000446852 IFIT1P09914 478 aaKnown RBP20.97■□□□□ 0.95
SMC6-206ENST00000446852 SUSD4Q5VX71 490 aa20.97■□□□□ 0.95
SMC6-206ENST00000446852 RUFY3Q7L099 469 aa20.97■□□□□ 0.95
SMC6-206ENST00000446852 ZSWIM6Q9HCJ5 1215 aa20.97■□□□□ 0.95
SMC6-206ENST00000446852 AKAP2Q9Y2D5 859 aa20.97■□□□□ 0.95
SMC6-206ENST00000446852 BTAF1O14981 1849 aa20.97■□□□□ 0.95
SMC6-206ENST00000446852 RPAP1Q9BWH6 1393 aaPredicted RBP20.97■□□□□ 0.95
SMC6-206ENST00000446852 ANKRD18BA2A2Z9 1011 aa20.97■□□□□ 0.95
SMC6-206ENST00000446852 BAG4O95429 457 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms