RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 RAD51AP2Q09MP3 1159 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 RESTQ13127 1097 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 AACSQ86V21 672 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 FMNL2Q96PY5 1086 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 EPC1Q9H2F5 836 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.35■□□□□ 0.21
VPS52-212ENST00000445902 TTC41PQ6P2S7 1318 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 HTATSF1O43719 755 aaKnown RBP16.35■□□□□ 0.21
VPS52-212ENST00000445902 SMC2O95347 1197 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 HOMER1Q86YM7 354 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 MAP4K1Q92918 833 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 KCNB2Q92953 911 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 LRRC2Q9BYS8 371 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 ZCCHC17Q9NP64 241 aaKnown RBP16.35■□□□□ 0.21
VPS52-212ENST00000445902 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.35■□□□□ 0.21
VPS52-212ENST00000445902 RIMBP3CA6NJZ7 1639 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 RIMBP3BA6NNM3 1639 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 RIMBP3Q9UFD9 1639 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 TMC6Q7Z403 805 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 NBPF11Q86T75 865 aa16.35■□□□□ 0.21
VPS52-212ENST00000445902 CHD2O14647 1828 aaKnown RBP16.35■□□□□ 0.21
VPS52-212ENST00000445902 ST5P78524 1137 aa16.34■□□□□ 0.21
VPS52-212ENST00000445902 CCDC8Q9H0W5 538 aaPredicted RBP16.34■□□□□ 0.21
VPS52-212ENST00000445902 PI4KAP2A4QPH2 592 aa16.34■□□□□ 0.21
VPS52-212ENST00000445902 PI4KAP1Q8N8J0 262 aa16.34■□□□□ 0.21
VPS52-212ENST00000445902 EYA1Q99502 592 aa16.34■□□□□ 0.21
VPS52-212ENST00000445902 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.34■□□□□ 0.215e-7■■■■□ 20.9
VPS52-212ENST00000445902 CACNA1FO60840 1977 aa16.33■□□□□ 0.21
VPS52-212ENST00000445902 FEZ2Q9UHY8 353 aaPredicted RBP16.33■□□□□ 0.21
VPS52-212ENST00000445902 CRYBG1Q9Y4K1 1723 aa16.33■□□□□ 0.21
VPS52-212ENST00000445902 KINO60870 393 aaKnown RBP16.33■□□□□ 0.2
VPS52-212ENST00000445902 CAVIN2O95810 425 aa16.33■□□□□ 0.2
VPS52-212ENST00000445902 ARMCX5Q6P1M9 558 aa16.33■□□□□ 0.2
VPS52-212ENST00000445902 EVI5LQ96CN4 794 aa16.33■□□□□ 0.2
VPS52-212ENST00000445902 ZFP91Q96JP5 570 aaPredicted RBP16.33■□□□□ 0.2
VPS52-212ENST00000445902 BOLA2Q9H3K6 86 aa16.33■□□□□ 0.2
VPS52-212ENST00000445902 L2HGDHQ9H9P8 463 aa16.33■□□□□ 0.2
VPS52-212ENST00000445902 DNAI1Q9UI46 699 aa16.33■□□□□ 0.2
VPS52-212ENST00000445902 AKAP12Q02952 1782 aa16.33■□□□□ 0.2
VPS52-212ENST00000445902 METP08581 1390 aa16.33■□□□□ 0.2
VPS52-212ENST00000445902 CCDC73Q6ZRK6 1079 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 ZNF589Q86UQ0 364 aaPredicted RBP16.32■□□□□ 0.2
VPS52-212ENST00000445902 FSD1Q9BTV5 496 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 RGPD1P0DJD0 1748 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 GUCY1B3Q02153 619 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 ANKRD1Q15327 319 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 RNF20Q5VTR2 975 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 TMCO3Q6UWJ1 677 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 XPO4Q9C0E2 1151 aaKnown RBP16.32■□□□□ 0.2
VPS52-212ENST00000445902 ACEP12821 1306 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 DIP2CQ9Y2E4 1556 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 CEP170BQ9Y4F5 1589 aaPredicted RBP16.32■□□□□ 0.2
VPS52-212ENST00000445902 CEP57L1Q8IYX8 460 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 UBXN4Q92575 508 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 CCDC34Q96HJ3 373 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 GPATCH3Q96I76 525 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 TLR7Q9NYK1 1049 aaKnown RBP16.32■□□□□ 0.2
VPS52-212ENST00000445902 IFNKQ9P0W0 207 aa16.32■□□□□ 0.2
VPS52-212ENST00000445902 GNAT3A8MTJ3 354 aa16.31■□□□□ 0.2
VPS52-212ENST00000445902 KRBA2Q6ZNG9 492 aa16.31■□□□□ 0.2
VPS52-212ENST00000445902 FAM177A1Q8N128 213 aaPredicted RBP16.31■□□□□ 0.2
VPS52-212ENST00000445902 SMARCE1Q969G3 411 aa16.31■□□□□ 0.2
VPS52-212ENST00000445902 EDC3Q96F86 508 aaKnown RBP16.31■□□□□ 0.2
VPS52-212ENST00000445902 SIL1Q9H173 461 aa16.31■□□□□ 0.2
VPS52-212ENST00000445902 ANO10Q9NW15 660 aa16.31■□□□□ 0.2
VPS52-212ENST00000445902 CHPF2Q9P2E5 772 aa16.31■□□□□ 0.2
VPS52-212ENST00000445902 CFAP45Q9UL16 551 aa16.31■□□□□ 0.2
VPS52-212ENST00000445902 KIF2AO00139 706 aaPredicted RBP16.31■□□□□ 0.2
VPS52-212ENST00000445902 BIN1O00499 593 aa16.31■□□□□ 0.2
VPS52-212ENST00000445902 GYS2P54840 703 aa16.31■□□□□ 0.2
VPS52-212ENST00000445902 PTPN21Q16825 1174 aa16.31■□□□□ 0.2
VPS52-212ENST00000445902 HSP90AB4PQ58FF6 505 aa16.31■□□□□ 0.2
VPS52-212ENST00000445902 FSIP1Q8NA03 581 aa16.31■□□□□ 0.2
VPS52-212ENST00000445902 ME1P48163 572 aa16.3■□□□□ 0.2
VPS52-212ENST00000445902 CCDC93Q567U6 631 aa16.3■□□□□ 0.2
VPS52-212ENST00000445902 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
VPS52-212ENST00000445902 USP28Q96RU2 1077 aa16.3■□□□□ 0.2
VPS52-212ENST00000445902 TMX1Q9H3N1 280 aa16.3■□□□□ 0.2
VPS52-212ENST00000445902 USP42Q9H9J4 1324 aaKnown RBP16.3■□□□□ 0.2
VPS52-212ENST00000445902 NPHP4O75161 1426 aaPredicted RBP16.3■□□□□ 0.2
VPS52-212ENST00000445902 ADGRL3Q9HAR2 1447 aa16.3■□□□□ 0.2
VPS52-212ENST00000445902 SFPQP23246 707 aaKnown RBP eCLIP16.3■□□□□ 0.2
VPS52-212ENST00000445902 AMPHP49418 695 aa16.3■□□□□ 0.2
VPS52-212ENST00000445902 GSDMDP57764 484 aa16.3■□□□□ 0.2
VPS52-212ENST00000445902 URI1O94763 535 aaPredicted RBP16.29■□□□□ 0.2
VPS52-212ENST00000445902 CHGBP05060 677 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 SLC20A2Q08357 652 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 TEX35Q5T0J7 233 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 BEND3Q5T5X7 828 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 Q6ZUG5 572 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 MNS1Q8NEH6 495 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 DNAAF4Q8WXU2 420 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 ORC3Q9UBD5 711 aaPredicted RBP16.29■□□□□ 0.2
VPS52-212ENST00000445902 N4BP2Q86UW6 1770 aaPredicted RBP16.29■□□□□ 0.2
VPS52-212ENST00000445902 NPM1P06748 294 aaKnown RBP eCLIP16.29■□□□□ 0.2
VPS52-212ENST00000445902 DPCR1Q3MIW9 517 aa16.29■□□□□ 0.2
VPS52-212ENST00000445902 PDIA4P13667 645 aaKnown RBP16.29■□□□□ 0.2
VPS52-212ENST00000445902 GOLGA8FQ08AF8 430 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms