RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 GLTPD2A6NH11 291 aa24■■□□□ 1.43
HDAC4-203ENST00000445704 BBOX1O75936 387 aa24■■□□□ 1.43
HDAC4-203ENST00000445704 F6X3S4 739 aa23.99■■□□□ 1.43
HDAC4-203ENST00000445704 IARSP41252 1262 aaKnown RBP23.99■■□□□ 1.43
HDAC4-203ENST00000445704 TRMT2AQ8IZ69 625 aaKnown RBP23.99■■□□□ 1.43
HDAC4-203ENST00000445704 CELF1Q92879 486 aaKnown RBP23.99■■□□□ 1.43
HDAC4-203ENST00000445704 CDHR2Q9BYE9 1310 aa23.99■■□□□ 1.43
HDAC4-203ENST00000445704 LRRC37AA6NMS7 1700 aa23.98■■□□□ 1.43
HDAC4-203ENST00000445704 PDE8AO60658 829 aa23.98■■□□□ 1.43
HDAC4-203ENST00000445704 SP8Q8IXZ3 490 aa23.97■■□□□ 1.43
HDAC4-203ENST00000445704 RRAGCQ9HB90 399 aa23.97■■□□□ 1.43
HDAC4-203ENST00000445704 H7C1W4 665 aa23.96■■□□□ 1.43
HDAC4-203ENST00000445704 GCKRQ14397 625 aa23.96■■□□□ 1.43
HDAC4-203ENST00000445704 GRIPAP1Q4V328 841 aa23.96■■□□□ 1.43
HDAC4-203ENST00000445704 LINS1Q8NG48 757 aa23.96■■□□□ 1.43
HDAC4-203ENST00000445704 HSP90B1P14625 803 aaKnown RBP23.95■■□□□ 1.42
HDAC4-203ENST00000445704 UBE3BQ7Z3V4 1068 aa23.95■■□□□ 1.42
HDAC4-203ENST00000445704 CCDC85AQ96PX6 553 aaPredicted RBP23.95■■□□□ 1.42
HDAC4-203ENST00000445704 SEC31BQ9NQW1 1179 aa23.95■■□□□ 1.42
HDAC4-203ENST00000445704 WDR90Q96KV7 1748 aa23.95■■□□□ 1.42
HDAC4-203ENST00000445704 DUOX1Q9NRD9 1551 aa23.95■■□□□ 1.42
HDAC4-203ENST00000445704 ZNF541Q9H0D2 1346 aa23.94■■□□□ 1.42
HDAC4-203ENST00000445704 MRPL50Q8N5N7 158 aaKnown RBP23.94■■□□□ 1.42
HDAC4-203ENST00000445704 POTECB2RU33 542 aa23.93■■□□□ 1.42
HDAC4-203ENST00000445704 DDNO94850 711 aaPredicted RBP23.93■■□□□ 1.42
HDAC4-203ENST00000445704 CASP7P55210 303 aa23.93■■□□□ 1.42
HDAC4-203ENST00000445704 BEND3Q5T5X7 828 aa23.93■■□□□ 1.42
HDAC4-203ENST00000445704 DPY19L2Q6NUT2 758 aa23.93■■□□□ 1.42
HDAC4-203ENST00000445704 SSH1Q8WYL5 1049 aa23.93■■□□□ 1.42
HDAC4-203ENST00000445704 TMX4Q9H1E5 349 aaPredicted RBP23.93■■□□□ 1.42
HDAC4-203ENST00000445704 CTSWP56202 376 aa23.92■■□□□ 1.42
HDAC4-203ENST00000445704 CCDC152Q4G0S7 254 aa23.92■■□□□ 1.42
HDAC4-203ENST00000445704 DPP8Q6V1X1 898 aaPredicted RBP23.92■■□□□ 1.42
HDAC4-203ENST00000445704 TMC4Q7Z404 712 aa23.92■■□□□ 1.42
HDAC4-203ENST00000445704 MPNDQ8N594 471 aa23.92■■□□□ 1.42
HDAC4-203ENST00000445704 RTFDC1Q9BY42 306 aaPredicted RBP23.92■■□□□ 1.42
HDAC4-203ENST00000445704 MYH3P11055 1940 aa23.92■■□□□ 1.42
HDAC4-203ENST00000445704 FZD9O00144 591 aa23.91■■□□□ 1.42
HDAC4-203ENST00000445704 RPS8P62241 208 aaKnown RBP23.91■■□□□ 1.42
HDAC4-203ENST00000445704 BCL2L13Q9BXK5 485 aa23.91■■□□□ 1.42
HDAC4-203ENST00000445704 TOMM70O94826 608 aa23.9■■□□□ 1.42
HDAC4-203ENST00000445704 AOC3Q16853 763 aa23.9■■□□□ 1.42
HDAC4-203ENST00000445704 LARGE2Q8N3Y3 721 aa23.9■■□□□ 1.42
HDAC4-203ENST00000445704 TTLL11Q8NHH1 800 aa23.9■■□□□ 1.42
HDAC4-203ENST00000445704 LTBP1Q14766 1721 aa23.9■■□□□ 1.42
HDAC4-203ENST00000445704 PPIP5K2O43314 1243 aa23.89■■□□□ 1.41
HDAC4-203ENST00000445704 VEGFAP15692 232 aaPredicted RBP23.88■■□□□ 1.41
HDAC4-203ENST00000445704 SUPT20HQ8NEM7 779 aa23.88■■□□□ 1.41
HDAC4-203ENST00000445704 JDP2Q8WYK2 163 aa23.88■■□□□ 1.41
HDAC4-203ENST00000445704 PLA2G12BQ9BX93 195 aa23.88■■□□□ 1.41
HDAC4-203ENST00000445704 GREM2Q9H772 168 aa23.88■■□□□ 1.41
HDAC4-203ENST00000445704 GPSM2P81274 684 aa23.87■■□□□ 1.41
HDAC4-203ENST00000445704 SLC4A10Q6U841 1118 aa23.87■■□□□ 1.41
HDAC4-203ENST00000445704 C16orf71Q8IYS4 520 aaPredicted RBP23.87■■□□□ 1.41
HDAC4-203ENST00000445704 HNRNPUQ00839 825 aaKnown RBP eCLIP23.86■■□□□ 1.41
HDAC4-203ENST00000445704 ALDH1L2Q3SY69 923 aa23.86■■□□□ 1.41
HDAC4-203ENST00000445704 RBM46Q8TBY0 533 aaKnown RBP23.86■■□□□ 1.41
HDAC4-203ENST00000445704 RTL9Q8NET4 1388 aa23.86■■□□□ 1.41
HDAC4-203ENST00000445704 KIAA2012Q0VF49 1180 aa23.85■■□□□ 1.41
HDAC4-203ENST00000445704 NIM1KQ8IY84 436 aa23.85■■□□□ 1.41
HDAC4-203ENST00000445704 L3MBTL3Q96JM7 780 aaPredicted RBP23.85■■□□□ 1.41
HDAC4-203ENST00000445704 VPS33BQ9H267 617 aa23.85■■□□□ 1.41
HDAC4-203ENST00000445704 NSFL1CQ9UNZ2 370 aaKnown RBP23.85■■□□□ 1.41
HDAC4-203ENST00000445704 PTPRCP08575 1304 aa23.84■■□□□ 1.41
HDAC4-203ENST00000445704 SPEF2Q9C093 1822 aa23.84■■□□□ 1.41
HDAC4-203ENST00000445704 ALDH1L1O75891 902 aa23.84■■□□□ 1.41
HDAC4-203ENST00000445704 ANKRD18AQ8IVF6 992 aa23.84■■□□□ 1.41
HDAC4-203ENST00000445704 SRCIN1Q9C0H9 1055 aa23.84■■□□□ 1.41
HDAC4-203ENST00000445704 SMC4Q9NTJ3 1288 aa23.84■■□□□ 1.41
HDAC4-203ENST00000445704 CSF1RP07333 972 aa23.83■■□□□ 1.41
HDAC4-203ENST00000445704 CT47B1P0C2W7 299 aaPredicted RBP23.83■■□□□ 1.41
HDAC4-203ENST00000445704 FAM161AQ3B820 660 aa23.83■■□□□ 1.41
HDAC4-203ENST00000445704 POLLQ9UGP5 575 aa23.83■■□□□ 1.41
HDAC4-203ENST00000445704 GRM8O00222 908 aa23.82■■□□□ 1.4
HDAC4-203ENST00000445704 EIF6P56537 245 aaKnown RBP23.82■■□□□ 1.4
HDAC4-203ENST00000445704 GPC2Q8N158 579 aa23.82■■□□□ 1.4
HDAC4-203ENST00000445704 GPR101Q96P66 508 aaPredicted RBP23.82■■□□□ 1.4
HDAC4-203ENST00000445704 CDC5LQ99459 802 aaKnown RBP23.82■■□□□ 1.4
HDAC4-203ENST00000445704 FOXO4P98177 505 aa23.81■■□□□ 1.4
HDAC4-203ENST00000445704 TBC1D16Q8TBP0 767 aa23.81■■□□□ 1.4
HDAC4-203ENST00000445704 PODXL2Q9NZ53 605 aa23.81■■□□□ 1.4
HDAC4-203ENST00000445704 SCN4AP35499 1836 aa23.81■■□□□ 1.4
HDAC4-203ENST00000445704 C6orf229H3BNL8 230 aa23.8■■□□□ 1.4
HDAC4-203ENST00000445704 ITGA6P23229 1130 aa23.8■■□□□ 1.4
HDAC4-203ENST00000445704 EPHA10Q5JZY3 1008 aa23.8■■□□□ 1.4
HDAC4-203ENST00000445704 ZNRF3Q9ULT6 936 aa23.8■■□□□ 1.4
HDAC4-203ENST00000445704 GJA3Q9Y6H8 435 aa23.8■■□□□ 1.4
HDAC4-203ENST00000445704 POTEIP0CG38 1075 aa23.79■■□□□ 1.4
HDAC4-203ENST00000445704 POTEJP0CG39 1038 aa23.79■■□□□ 1.4
HDAC4-203ENST00000445704 HSPA6P17066 643 aa23.79■■□□□ 1.4
HDAC4-203ENST00000445704 WASHC4Q2M389 1173 aa23.79■■□□□ 1.4
HDAC4-203ENST00000445704 C9orf78Q9NZ63 289 aaPredicted RBP23.79■■□□□ 1.4
HDAC4-203ENST00000445704 IQCA1LA6NCM1 817 aa23.78■■□□□ 1.4
HDAC4-203ENST00000445704 YDJCA8MPS7 323 aa23.78■■□□□ 1.4
HDAC4-203ENST00000445704 RIMBP2O15034 1052 aa23.78■■□□□ 1.4
HDAC4-203ENST00000445704 RARSP54136 660 aaKnown RBP23.78■■□□□ 1.4
HDAC4-203ENST00000445704 FSTL1Q12841 308 aa23.78■■□□□ 1.4
HDAC4-203ENST00000445704 TAF1DQ9H5J8 278 aaPredicted RBP23.78■■□□□ 1.4
HDAC4-203ENST00000445704 BSDC1Q9NW68 430 aaPredicted RBP23.78■■□□□ 1.4
HDAC4-203ENST00000445704 ANKIB1Q9P2G1 1089 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms