RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 POTECB2RU33 542 aa11.26□□□□□ -0.61
USP6NL-203ENST00000443016 STK31Q9BXU1 1019 aa11.26□□□□□ -0.61
USP6NL-203ENST00000443016 BBOX1O75936 387 aa11.25□□□□□ -0.61
USP6NL-203ENST00000443016 FAM9BQ8IZU0 186 aa11.25□□□□□ -0.61
USP6NL-203ENST00000443016 TSPYL6Q8N831 410 aa11.25□□□□□ -0.61
USP6NL-203ENST00000443016 ISCA1Q9BUE6 129 aa11.25□□□□□ -0.61
USP6NL-203ENST00000443016 ATP6V0A2Q9Y487 856 aa11.25□□□□□ -0.61
USP6NL-203ENST00000443016 DICER1Q9UPY3 1922 aaKnown RBP11.25□□□□□ -0.61
USP6NL-203ENST00000443016 EIF6P56537 245 aaKnown RBP11.25□□□□□ -0.61
USP6NL-203ENST00000443016 HTRA3P83110 453 aa11.25□□□□□ -0.61
USP6NL-203ENST00000443016 ZNF541Q9H0D2 1346 aa11.24□□□□□ -0.61
USP6NL-203ENST00000443016 PPIP5K2O43314 1243 aa11.24□□□□□ -0.61
USP6NL-203ENST00000443016 DPP8Q6V1X1 898 aaPredicted RBP11.24□□□□□ -0.61
USP6NL-203ENST00000443016 MYD88Q99836 296 aa11.24□□□□□ -0.61
USP6NL-203ENST00000443016 GJA3Q9Y6H8 435 aa11.24□□□□□ -0.61
USP6NL-203ENST00000443016 FZD9O00144 591 aa11.24□□□□□ -0.61
USP6NL-203ENST00000443016 IRS4O14654 1257 aaPredicted RBP11.24□□□□□ -0.61
USP6NL-203ENST00000443016 GRAPQ13588 217 aa11.24□□□□□ -0.61
USP6NL-203ENST00000443016 TWISTNBQ3B726 338 aaPredicted RBP11.24□□□□□ -0.61
USP6NL-203ENST00000443016 EAPPQ56P03 285 aaPredicted RBP11.24□□□□□ -0.61
USP6NL-203ENST00000443016 SLC51AQ86UW1 340 aa11.24□□□□□ -0.61
USP6NL-203ENST00000443016 GRAPLQ8TC17 118 aaPredicted RBP11.24□□□□□ -0.61
USP6NL-203ENST00000443016 HSP90B1P14625 803 aaKnown RBP11.23□□□□□ -0.61
USP6NL-203ENST00000443016 TRIM28Q13263 835 aaKnown RBP11.23□□□□□ -0.61
USP6NL-203ENST00000443016 NIM1KQ8IY84 436 aa11.23□□□□□ -0.61
USP6NL-203ENST00000443016 GPC2Q8N158 579 aa11.23□□□□□ -0.61
USP6NL-203ENST00000443016 MPNDQ8N594 471 aa11.23□□□□□ -0.61
USP6NL-203ENST00000443016 SUPT20HQ8NEM7 779 aa11.23□□□□□ -0.61
USP6NL-203ENST00000443016 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
USP6NL-203ENST00000443016 C1orf115Q9H7X2 142 aa11.23□□□□□ -0.61
USP6NL-203ENST00000443016 ANKRD36CQ5JPF3 1778 aa11.23□□□□□ -0.61
USP6NL-203ENST00000443016 AOC3Q16853 763 aa11.23□□□□□ -0.61
USP6NL-203ENST00000443016 SP8Q8IXZ3 490 aa11.23□□□□□ -0.61
USP6NL-203ENST00000443016 ZBTB38Q8NAP3 1195 aaPredicted RBP11.23□□□□□ -0.61
USP6NL-203ENST00000443016 HACL1Q9UJ83 578 aa11.23□□□□□ -0.61
USP6NL-203ENST00000443016 CLEC11AQ9Y240 323 aa11.23□□□□□ -0.61
USP6NL-203ENST00000443016 WDR90Q96KV7 1748 aa11.22□□□□□ -0.61
USP6NL-203ENST00000443016 CHADLQ6NUI6 762 aa11.22□□□□□ -0.61
USP6NL-203ENST00000443016 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
USP6NL-203ENST00000443016 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
USP6NL-203ENST00000443016 TAF1DQ9H5J8 278 aaPredicted RBP11.22□□□□□ -0.61
USP6NL-203ENST00000443016 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
USP6NL-203ENST00000443016 IL16Q14005 1332 aa11.22□□□□□ -0.61
USP6NL-203ENST00000443016 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
USP6NL-203ENST00000443016 POTEJP0CG39 1038 aa11.21□□□□□ -0.61
USP6NL-203ENST00000443016 LMOD1P29536 600 aaPredicted RBP11.21□□□□□ -0.61
USP6NL-203ENST00000443016 NEXNQ0ZGT2 675 aa11.21□□□□□ -0.61
USP6NL-203ENST00000443016 CWC25Q9NXE8 425 aaPredicted RBP11.21□□□□□ -0.61
USP6NL-203ENST00000443016 SNED1Q8TER0 1413 aa11.21□□□□□ -0.61
USP6NL-203ENST00000443016 PI4KAP2A4QPH2 592 aa11.21□□□□□ -0.61
USP6NL-203ENST00000443016 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
USP6NL-203ENST00000443016 EPHX2P34913 555 aa11.21□□□□□ -0.61
USP6NL-203ENST00000443016 SF3B3Q15393 1217 aaKnown RBP11.21□□□□□ -0.61
USP6NL-203ENST00000443016 LDHDQ86WU2 507 aa11.21□□□□□ -0.61
USP6NL-203ENST00000443016 DNAJC5GQ8N7S2 189 aa11.21□□□□□ -0.61
USP6NL-203ENST00000443016 PI4KAP1Q8N8J0 262 aa11.21□□□□□ -0.61
USP6NL-203ENST00000443016 METTL22Q9BUU2 404 aaPredicted RBP11.21□□□□□ -0.61
USP6NL-203ENST00000443016 NSFL1CQ9UNZ2 370 aaKnown RBP11.21□□□□□ -0.61
USP6NL-203ENST00000443016 KSR2Q6VAB6 950 aa11.2□□□□□ -0.62
USP6NL-203ENST00000443016 PNMA8AQ86V59 439 aaPredicted RBP11.2□□□□□ -0.62
USP6NL-203ENST00000443016 VPS33BQ9H267 617 aa11.2□□□□□ -0.62
USP6NL-203ENST00000443016 WDR63Q8IWG1 891 aa11.2□□□□□ -0.62
USP6NL-203ENST00000443016 JARID2Q92833 1246 aaPredicted RBP11.2□□□□□ -0.62
USP6NL-203ENST00000443016 CELF1Q92879 486 aaKnown RBP11.2□□□□□ -0.62
USP6NL-203ENST00000443016 FANCIQ9NVI1 1328 aa11.2□□□□□ -0.62
USP6NL-203ENST00000443016 KLRG1Q96E93 195 aa11.19□□□□□ -0.62
USP6NL-203ENST00000443016 CCDC85AQ96PX6 553 aaPredicted RBP11.19□□□□□ -0.62
USP6NL-203ENST00000443016 PCCAP05165 728 aaPredicted RBP11.19□□□□□ -0.62
USP6NL-203ENST00000443016 CCDC152Q4G0S7 254 aa11.19□□□□□ -0.62
USP6NL-203ENST00000443016 RTFDC1Q9BY42 306 aaPredicted RBP11.19□□□□□ -0.62
USP6NL-203ENST00000443016 ZNRF3Q9ULT6 936 aa11.19□□□□□ -0.62
USP6NL-203ENST00000443016 C6orf229H3BNL8 230 aa11.18□□□□□ -0.62
USP6NL-203ENST00000443016 RPS8P62241 208 aaKnown RBP11.18□□□□□ -0.62
USP6NL-203ENST00000443016 KIAA2012Q0VF49 1180 aa11.18□□□□□ -0.62
USP6NL-203ENST00000443016 FKBP5Q13451 457 aaPredicted RBP11.18□□□□□ -0.62
USP6NL-203ENST00000443016 PDE8AO60658 829 aa11.18□□□□□ -0.62
USP6NL-203ENST00000443016 EXOSC9Q06265 439 aaKnown RBP11.18□□□□□ -0.62
USP6NL-203ENST00000443016 WASHC4Q2M389 1173 aa11.18□□□□□ -0.62
USP6NL-203ENST00000443016 MYH16Q9H6N6 1097 aa11.18□□□□□ -0.62
USP6NL-203ENST00000443016 FLIIQ13045 1269 aa11.17□□□□□ -0.62
USP6NL-203ENST00000443016 G2E3Q7L622 706 aa11.17□□□□□ -0.62
USP6NL-203ENST00000443016 SCN4AP35499 1836 aa11.17□□□□□ -0.62
USP6NL-203ENST00000443016 RAD17O75943 681 aa11.17□□□□□ -0.62
USP6NL-203ENST00000443016 EPS15P42566 896 aa11.17□□□□□ -0.62
USP6NL-203ENST00000443016 CXCL9Q07325 125 aa11.17□□□□□ -0.62
USP6NL-203ENST00000443016 CWF19L2Q2TBE0 894 aaKnown RBP11.17□□□□□ -0.62
USP6NL-203ENST00000443016 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
USP6NL-203ENST00000443016 SEC31BQ9NQW1 1179 aa11.17□□□□□ -0.62
USP6NL-203ENST00000443016 ANKIB1Q9P2G1 1089 aa11.17□□□□□ -0.62
USP6NL-203ENST00000443016 COL4A5P29400 1685 aa11.17□□□□□ -0.62
USP6NL-203ENST00000443016 LAMB2P55268 1798 aa11.16□□□□□ -0.62
USP6NL-203ENST00000443016 RIMBP2O15034 1052 aa11.16□□□□□ -0.62
USP6NL-203ENST00000443016 IGKV5-2P06315 115 aa11.16□□□□□ -0.62
USP6NL-203ENST00000443016 SCNN1DP51172 638 aa11.16□□□□□ -0.62
USP6NL-203ENST00000443016 TNIP1Q15025 636 aa11.16□□□□□ -0.62
USP6NL-203ENST00000443016 MAP1SQ66K74 1059 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-203ENST00000443016 CIAPIN1Q6FI81 312 aa11.16□□□□□ -0.62
USP6NL-203ENST00000443016 G3V3G9 751 aa11.16□□□□□ -0.62
USP6NL-203ENST00000443016 VAMP4O75379 141 aa11.16□□□□□ -0.62
USP6NL-203ENST00000443016 DCAF8Q5TAQ9 597 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms