RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 RRP7AQ9Y3A4 280 aaKnown RBP18.58■□□□□ 0.56
LINC00642-202ENST00000442515 LAMB4A4D0S4 1761 aa18.58■□□□□ 0.56
LINC00642-202ENST00000442515 YDJCA8MPS7 323 aa18.57■□□□□ 0.56
LINC00642-202ENST00000442515 H7C1D1 291 aa18.57■□□□□ 0.56
LINC00642-202ENST00000442515 TRPA1O75762 1119 aa18.57■□□□□ 0.56
LINC00642-202ENST00000442515 MYL6BP14649 208 aa18.57■□□□□ 0.56
LINC00642-202ENST00000442515 TAF7Q15545 349 aaPredicted RBP18.57■□□□□ 0.56
LINC00642-202ENST00000442515 GBA2Q9HCG7 927 aaPredicted RBP18.57■□□□□ 0.56
LINC00642-202ENST00000442515 HTATSF1O43719 755 aaKnown RBP18.56■□□□□ 0.56
LINC00642-202ENST00000442515 KRT26Q7Z3Y9 468 aa18.56■□□□□ 0.56
LINC00642-202ENST00000442515 PPP1R42Q7Z4L9 355 aa18.56■□□□□ 0.56
LINC00642-202ENST00000442515 MPNDQ8N594 471 aa18.56■□□□□ 0.56
LINC00642-202ENST00000442515 CCDC102AQ96A19 550 aa18.56■□□□□ 0.56
LINC00642-202ENST00000442515 U2AF1L5P0DN76 240 aaPredicted RBP18.55■□□□□ 0.56
LINC00642-202ENST00000442515 ZNF157P51786 506 aaPredicted RBP18.55■□□□□ 0.56
LINC00642-202ENST00000442515 U2AF1Q01081 240 aaKnown RBP eCLIP18.55■□□□□ 0.56
LINC00642-202ENST00000442515 PARP10Q53GL7 1025 aa18.55■□□□□ 0.56
LINC00642-202ENST00000442515 GIGYF2Q6Y7W6 1299 aaKnown RBP18.55■□□□□ 0.56
LINC00642-202ENST00000442515 SAMD7Q7Z3H4 446 aa18.55■□□□□ 0.56
LINC00642-202ENST00000442515 CTU1Q7Z7A3 348 aaKnown RBP18.55■□□□□ 0.56
LINC00642-202ENST00000442515 CFAP53Q96M91 514 aa18.55■□□□□ 0.56
LINC00642-202ENST00000442515 ZBTB12Q9Y330 459 aaPredicted RBP18.55■□□□□ 0.56
LINC00642-202ENST00000442515 ADM5C9JUS6 153 aa18.54■□□□□ 0.56
LINC00642-202ENST00000442515 TRIM26Q12899 539 aaPredicted RBP18.54■□□□□ 0.56
LINC00642-202ENST00000442515 SP8Q8IXZ3 490 aa18.54■□□□□ 0.56
LINC00642-202ENST00000442515 C2orf69Q8N8R5 385 aa18.54■□□□□ 0.56
LINC00642-202ENST00000442515 NUDCQ9Y266 331 aa18.54■□□□□ 0.56
LINC00642-202ENST00000442515 BBOX1O75936 387 aa18.53■□□□□ 0.56
LINC00642-202ENST00000442515 EGFRP00533 1210 aa18.53■□□□□ 0.56
LINC00642-202ENST00000442515 SLC10A3P09131 477 aa18.53■□□□□ 0.56
LINC00642-202ENST00000442515 TBC1D10BQ4KMP7 808 aaPredicted RBP18.53■□□□□ 0.56
LINC00642-202ENST00000442515 SLC10A5Q5PT55 438 aa18.53■□□□□ 0.56
LINC00642-202ENST00000442515 UTP14AQ9BVJ6 771 aaKnown RBP18.53■□□□□ 0.56
LINC00642-202ENST00000442515 NUP98P52948 1817 aa18.53■□□□□ 0.56
LINC00642-202ENST00000442515 EIF4A1P60842 406 aaKnown RBP18.52■□□□□ 0.56
LINC00642-202ENST00000442515 DPF2Q92785 391 aa18.52■□□□□ 0.56
LINC00642-202ENST00000442515 CSRNP1Q96S65 589 aa18.52■□□□□ 0.56
LINC00642-202ENST00000442515 HPS5Q9UPZ3 1129 aa18.52■□□□□ 0.56
LINC00642-202ENST00000442515 DUOX1Q9NRD9 1551 aa18.51■□□□□ 0.55
LINC00642-202ENST00000442515 PSMD14O00487 310 aa18.51■□□□□ 0.55
LINC00642-202ENST00000442515 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
LINC00642-202ENST00000442515 PCGF6Q9BYE7 350 aa18.51■□□□□ 0.55
LINC00642-202ENST00000442515 GRAPQ13588 217 aa18.5■□□□□ 0.55
LINC00642-202ENST00000442515 GRAPLQ8TC17 118 aaPredicted RBP18.5■□□□□ 0.55
LINC00642-202ENST00000442515 DCPSQ96C86 337 aaKnown RBP18.5■□□□□ 0.55
LINC00642-202ENST00000442515 DDX46Q7L014 1031 aaKnown RBP18.49■□□□□ 0.55
LINC00642-202ENST00000442515 ERBB4Q15303 1308 aa18.49■□□□□ 0.55
LINC00642-202ENST00000442515 HTTP42858 3142 aa18.48■□□□□ 0.55
LINC00642-202ENST00000442515 HCLS1P14317 486 aaPredicted RBP18.48■□□□□ 0.55
LINC00642-202ENST00000442515 LRP10Q7Z4F1 713 aa18.48■□□□□ 0.55
LINC00642-202ENST00000442515 DBNDD1Q9H9R9 158 aa18.48■□□□□ 0.55
LINC00642-202ENST00000442515 BRCA2P51587 3418 aa18.48■□□□□ 0.55
LINC00642-202ENST00000442515 RBM26Q5T8P6 1007 aaKnown RBP18.47■□□□□ 0.55
LINC00642-202ENST00000442515 RASAL3Q86YV0 1011 aa18.47■□□□□ 0.55
LINC00642-202ENST00000442515 THUMPD2Q9BTF0 503 aaKnown RBP18.47■□□□□ 0.55
LINC00642-202ENST00000442515 KDM3BQ7LBC6 1761 aa18.47■□□□□ 0.55
LINC00642-202ENST00000442515 RPS12P25398 132 aaKnown RBP18.46■□□□□ 0.55
LINC00642-202ENST00000442515 KIF4BQ2VIQ3 1234 aa18.46■□□□□ 0.55
LINC00642-202ENST00000442515 SULF1Q8IWU6 871 aa18.46■□□□□ 0.55
LINC00642-202ENST00000442515 GGA3Q9NZ52 723 aa18.46■□□□□ 0.55
LINC00642-202ENST00000442515 RTL9Q8NET4 1388 aa18.45■□□□□ 0.54
LINC00642-202ENST00000442515 CENPFP49454 3210 aa18.45■□□□□ 0.54
LINC00642-202ENST00000442515 PKN2Q16513 984 aaKnown RBP18.45■□□□□ 0.54
LINC00642-202ENST00000442515 WASHC4Q2M389 1173 aa18.45■□□□□ 0.54
LINC00642-202ENST00000442515 TMC4Q7Z404 712 aa18.45■□□□□ 0.54
LINC00642-202ENST00000442515 REM2Q8IYK8 340 aaPredicted RBP18.45■□□□□ 0.54
LINC00642-202ENST00000442515 CDCA5Q96FF9 252 aa18.45■□□□□ 0.54
LINC00642-202ENST00000442515 PDIA6Q15084 440 aa18.44■□□□□ 0.54
LINC00642-202ENST00000442515 NLRP10Q86W26 655 aa18.44■□□□□ 0.54
LINC00642-202ENST00000442515 ASTN2O75129 1339 aaPredicted RBP18.44■□□□□ 0.54
LINC00642-202ENST00000442515 RIMBP2O15034 1052 aa18.43■□□□□ 0.54
LINC00642-202ENST00000442515 ECE2O60344 883 aa18.43■□□□□ 0.54
LINC00642-202ENST00000442515 ANXA1P04083 346 aa18.43■□□□□ 0.54
LINC00642-202ENST00000442515 PROSER3Q2NL68 480 aa18.43■□□□□ 0.54
LINC00642-202ENST00000442515 ZNF296Q8WUU4 475 aaPredicted RBP18.43■□□□□ 0.54
LINC00642-202ENST00000442515 GCC1Q96CN9 775 aa18.43■□□□□ 0.54
LINC00642-202ENST00000442515 KCNQ5Q9NR82 932 aa18.43■□□□□ 0.54
LINC00642-202ENST00000442515 HDAC9Q9UKV0 1011 aa18.43■□□□□ 0.54
LINC00642-202ENST00000442515 SH3TC1Q8TE82 1336 aa18.43■□□□□ 0.54
LINC00642-202ENST00000442515 HSP90AB3PQ58FF7 597 aa18.42■□□□□ 0.54
LINC00642-202ENST00000442515 TRMT112Q9UI30 125 aaKnown RBP18.42■□□□□ 0.54
LINC00642-202ENST00000442515 NSFL1CQ9UNZ2 370 aaKnown RBP18.42■□□□□ 0.54
LINC00642-202ENST00000442515 LRRC37AA6NMS7 1700 aa18.41■□□□□ 0.54
LINC00642-202ENST00000442515 PPP2R1AP30153 589 aa18.41■□□□□ 0.54
LINC00642-202ENST00000442515 DOK7Q18PE1 504 aa18.41■□□□□ 0.54
LINC00642-202ENST00000442515 POLLQ9UGP5 575 aa18.41■□□□□ 0.54
LINC00642-202ENST00000442515 C6orf229H3BNL8 230 aa18.4■□□□□ 0.54
LINC00642-202ENST00000442515 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
LINC00642-202ENST00000442515 CELF1Q92879 486 aaKnown RBP18.4■□□□□ 0.54
LINC00642-202ENST00000442515 LAMB2P55268 1798 aa18.4■□□□□ 0.54
LINC00642-202ENST00000442515 TBC1D8O95759 1140 aa18.39■□□□□ 0.53
LINC00642-202ENST00000442515 FKBP1BP68106 108 aa18.39■□□□□ 0.53
LINC00642-202ENST00000442515 GPSM2P81274 684 aa18.39■□□□□ 0.53
LINC00642-202ENST00000442515 ANGEL2Q5VTE6 544 aaKnown RBP18.39■□□□□ 0.53
LINC00642-202ENST00000442515 ZNF428Q96B54 188 aa18.39■□□□□ 0.53
LINC00642-202ENST00000442515 ANKRD36CQ5JPF3 1778 aa18.39■□□□□ 0.53
LINC00642-202ENST00000442515 NEFMP07197 916 aa18.38■□□□□ 0.53
LINC00642-202ENST00000442515 TCIRG1Q13488 830 aa18.38■□□□□ 0.53
LINC00642-202ENST00000442515 HABP4Q5JVS0 413 aaKnown RBP18.38■□□□□ 0.53
LINC00642-202ENST00000442515 FBXO46Q6PJ61 603 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms