RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 EPHX2P34913 555 aa21■□□□□ 0.95
SNRPD3-204ENST00000439775 DPP8Q6V1X1 898 aaPredicted RBP21■□□□□ 0.95
SNRPD3-204ENST00000439775 PNMA8AQ86V59 439 aaPredicted RBP21■□□□□ 0.95
SNRPD3-204ENST00000439775 NIM1KQ8IY84 436 aa21■□□□□ 0.95
SNRPD3-204ENST00000439775 TSPYL6Q8N831 410 aa21■□□□□ 0.95
SNRPD3-204ENST00000439775 TSR2Q969E8 191 aaKnown RBP21■□□□□ 0.95
SNRPD3-204ENST00000439775 DDX58O95786 925 aaKnown RBP20.99■□□□□ 0.95
SNRPD3-204ENST00000439775 AOC3Q16853 763 aa20.99■□□□□ 0.95
SNRPD3-204ENST00000439775 ZBTB38Q8NAP3 1195 aaPredicted RBP20.99■□□□□ 0.95
SNRPD3-204ENST00000439775 ZNF428Q96B54 188 aa20.99■□□□□ 0.95
SNRPD3-204ENST00000439775 IRS4O14654 1257 aaPredicted RBP20.98■□□□□ 0.95
SNRPD3-204ENST00000439775 MPNDQ8N594 471 aa20.98■□□□□ 0.95
SNRPD3-204ENST00000439775 CCDC191Q8NCU4 936 aa20.98■□□□□ 0.95
SNRPD3-204ENST00000439775 DUOX1Q9NRD9 1551 aa20.97■□□□□ 0.95
SNRPD3-204ENST00000439775 HSP90B1P14625 803 aaKnown RBP20.97■□□□□ 0.95
SNRPD3-204ENST00000439775 KIAA2012Q0VF49 1180 aa20.97■□□□□ 0.95
SNRPD3-204ENST00000439775 EAPPQ56P03 285 aaPredicted RBP20.97■□□□□ 0.95
SNRPD3-204ENST00000439775 MYD88Q99836 296 aa20.97■□□□□ 0.95
SNRPD3-204ENST00000439775 PASKQ96RG2 1323 aa20.97■□□□□ 0.95
SNRPD3-204ENST00000439775 LTBP1Q14766 1721 aa20.96■□□□□ 0.95
SNRPD3-204ENST00000439775 METTL22Q9BUU2 404 aaPredicted RBP20.96■□□□□ 0.95
SNRPD3-204ENST00000439775 STK31Q9BXU1 1019 aa20.96■□□□□ 0.95
SNRPD3-204ENST00000439775 CREBZFQ9NS37 354 aa20.96■□□□□ 0.95
SNRPD3-204ENST00000439775 GJA3Q9Y6H8 435 aa20.96■□□□□ 0.95
SNRPD3-204ENST00000439775 PCCAP05165 728 aaPredicted RBP20.95■□□□□ 0.94
SNRPD3-204ENST00000439775 LMOD1P29536 600 aaPredicted RBP20.95■□□□□ 0.94
SNRPD3-204ENST00000439775 SCNN1DP51172 638 aa20.95■□□□□ 0.94
SNRPD3-204ENST00000439775 TWISTNBQ3B726 338 aaPredicted RBP20.95■□□□□ 0.94
SNRPD3-204ENST00000439775 RTL5Q5HYW3 569 aaPredicted RBP20.95■□□□□ 0.94
SNRPD3-204ENST00000439775 ZNRF3Q9ULT6 936 aa20.95■□□□□ 0.94
SNRPD3-204ENST00000439775 CELF1Q92879 486 aaKnown RBP20.94■□□□□ 0.94
SNRPD3-204ENST00000439775 CWC25Q9NXE8 425 aaPredicted RBP20.94■□□□□ 0.94
SNRPD3-204ENST00000439775 TAF1P21675 1872 aa20.94■□□□□ 0.94
SNRPD3-204ENST00000439775 PCNTO95613 3336 aa20.93■□□□□ 0.94
SNRPD3-204ENST00000439775 COL4A1P02462 1669 aa20.93■□□□□ 0.94
SNRPD3-204ENST00000439775 ITGBL1O95965 494 aaPredicted RBP20.93■□□□□ 0.94
SNRPD3-204ENST00000439775 KSR2Q6VAB6 950 aa20.93■□□□□ 0.94
SNRPD3-204ENST00000439775 WDR63Q8IWG1 891 aa20.93■□□□□ 0.94
SNRPD3-204ENST00000439775 MAP3K2Q9Y2U5 619 aa20.93■□□□□ 0.94
SNRPD3-204ENST00000439775 CLEC11AQ9Y240 323 aa20.92■□□□□ 0.94
SNRPD3-204ENST00000439775 FANCIQ9NVI1 1328 aa20.92■□□□□ 0.94
SNRPD3-204ENST00000439775 PI4KAP2A4QPH2 592 aa20.91■□□□□ 0.94
SNRPD3-204ENST00000439775 CXCL9Q07325 125 aa20.91■□□□□ 0.94
SNRPD3-204ENST00000439775 PI4KAP1Q8N8J0 262 aa20.91■□□□□ 0.94
SNRPD3-204ENST00000439775 CDHR2Q9BYE9 1310 aa20.91■□□□□ 0.94
SNRPD3-204ENST00000439775 PDE8AO60658 829 aa20.9■□□□□ 0.94
SNRPD3-204ENST00000439775 EPS15P42566 896 aa20.9■□□□□ 0.94
SNRPD3-204ENST00000439775 RPS8P62241 208 aaKnown RBP20.9■□□□□ 0.94
SNRPD3-204ENST00000439775 CCDC152Q4G0S7 254 aa20.9■□□□□ 0.94
SNRPD3-204ENST00000439775 IGKV5-2P06315 115 aa20.89■□□□□ 0.93
SNRPD3-204ENST00000439775 CIAPIN1Q6FI81 312 aa20.89■□□□□ 0.93
SNRPD3-204ENST00000439775 USP50Q70EL3 339 aaPredicted RBP20.89■□□□□ 0.93
SNRPD3-204ENST00000439775 CNTROBQ8N137 903 aa20.89■□□□□ 0.93
SNRPD3-204ENST00000439775 GPRC5DQ9NZD1 345 aa20.89■□□□□ 0.93
SNRPD3-204ENST00000439775 NSFL1CQ9UNZ2 370 aaKnown RBP20.89■□□□□ 0.93
SNRPD3-204ENST00000439775 SLC4A2P04920 1241 aa20.88■□□□□ 0.93
SNRPD3-204ENST00000439775 NEXNQ0ZGT2 675 aa20.88■□□□□ 0.93
SNRPD3-204ENST00000439775 WASHC4Q2M389 1173 aa20.88■□□□□ 0.93
SNRPD3-204ENST00000439775 MAP1SQ66K74 1059 aaPredicted RBP20.88■□□□□ 0.93
SNRPD3-204ENST00000439775 CNTNAP1P78357 1384 aa20.87■□□□□ 0.93
SNRPD3-204ENST00000439775 TMEM88BA6NKF7 163 aa20.87■□□□□ 0.93
SNRPD3-204ENST00000439775 YDJCA8MPS7 323 aa20.87■□□□□ 0.93
SNRPD3-204ENST00000439775 GPSM2P81274 684 aa20.87■□□□□ 0.93
SNRPD3-204ENST00000439775 TNIP1Q15025 636 aa20.87■□□□□ 0.93
SNRPD3-204ENST00000439775 SEC31BQ9NQW1 1179 aa20.87■□□□□ 0.93
SNRPD3-204ENST00000439775 ADARB2Q9NS39 739 aaKnown RBP20.87■□□□□ 0.93
SNRPD3-204ENST00000439775 PODXL2Q9NZ53 605 aa20.87■□□□□ 0.93
SNRPD3-204ENST00000439775 GMPSP49915 693 aaPredicted RBP20.86■□□□□ 0.93
SNRPD3-204ENST00000439775 FLIIQ13045 1269 aa20.86■□□□□ 0.93
SNRPD3-204ENST00000439775 G2E3Q7L622 706 aa20.86■□□□□ 0.93
SNRPD3-204ENST00000439775 EYA3Q99504 573 aa20.86■□□□□ 0.93
SNRPD3-204ENST00000439775 POLLQ9UGP5 575 aa20.86■□□□□ 0.93
SNRPD3-204ENST00000439775 NEURL1BA8MQ27 555 aa20.85■□□□□ 0.93
SNRPD3-204ENST00000439775 C6orf229H3BNL8 230 aa20.85■□□□□ 0.93
SNRPD3-204ENST00000439775 RAD17O75943 681 aa20.85■□□□□ 0.93
SNRPD3-204ENST00000439775 CTSWP56202 376 aa20.85■□□□□ 0.93
SNRPD3-204ENST00000439775 IFFO2Q5TF58 517 aa20.85■□□□□ 0.93
SNRPD3-204ENST00000439775 JARID2Q92833 1246 aaPredicted RBP20.85■□□□□ 0.93
SNRPD3-204ENST00000439775 SALL2Q9Y467 1007 aaPredicted RBP20.85■□□□□ 0.93
SNRPD3-204ENST00000439775 VAMP4O75379 141 aa20.84■□□□□ 0.93
SNRPD3-204ENST00000439775 CWF19L2Q2TBE0 894 aaKnown RBP20.84■□□□□ 0.93
SNRPD3-204ENST00000439775 TBC1D16Q8TBP0 767 aa20.84■□□□□ 0.93
SNRPD3-204ENST00000439775 MKRN1Q9UHC7 482 aaKnown RBP20.84■□□□□ 0.93
SNRPD3-204ENST00000439775 RTL9Q8NET4 1388 aa20.84■□□□□ 0.93
SNRPD3-204ENST00000439775 FAM9BQ8IZU0 186 aa20.83■□□□□ 0.93
SNRPD3-204ENST00000439775 BCL2L13Q9BXK5 485 aa20.83■□□□□ 0.93
SNRPD3-204ENST00000439775 EXOSC9Q06265 439 aaKnown RBP20.82■□□□□ 0.92
SNRPD3-204ENST00000439775 FKBP5Q13451 457 aaPredicted RBP20.82■□□□□ 0.92
SNRPD3-204ENST00000439775 ANKRD18AQ8IVF6 992 aa20.82■□□□□ 0.92
SNRPD3-204ENST00000439775 CDC5LQ99459 802 aaKnown RBP20.82■□□□□ 0.92
SNRPD3-204ENST00000439775 DBNDD1Q9H9R9 158 aa20.82■□□□□ 0.92
SNRPD3-204ENST00000439775 RIMBP2O15034 1052 aa20.81■□□□□ 0.92
SNRPD3-204ENST00000439775 ECE2O60344 883 aa20.81■□□□□ 0.92
SNRPD3-204ENST00000439775 UFL1O94874 794 aa20.81■□□□□ 0.92
SNRPD3-204ENST00000439775 TTLL11Q8NHH1 800 aa20.81■□□□□ 0.92
SNRPD3-204ENST00000439775 DNAAF4Q8WXU2 420 aa20.81■□□□□ 0.92
SNRPD3-204ENST00000439775 CCDC85AQ96PX6 553 aaPredicted RBP20.81■□□□□ 0.92
SNRPD3-204ENST00000439775 MYH16Q9H6N6 1097 aa20.81■□□□□ 0.92
SNRPD3-204ENST00000439775 SPINK5Q9NQ38 1064 aaPredicted RBP20.81■□□□□ 0.92
SNRPD3-204ENST00000439775 ANKIB1Q9P2G1 1089 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms