RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 HCLS1P14317 486 aaPredicted RBP15.81■□□□□ 0.12
SCLT1-202ENST00000439369 POLA2Q14181 598 aa15.81■□□□□ 0.12
SCLT1-202ENST00000439369 RWDD1Q9H446 243 aaPredicted RBP15.81■□□□□ 0.12
SCLT1-202ENST00000439369 C10orf71Q711Q0 1435 aa15.8■□□□□ 0.12
SCLT1-202ENST00000439369 SRGAP3O43295 1099 aa15.8■□□□□ 0.12
SCLT1-202ENST00000439369 PDE6BP35913 854 aa15.8■□□□□ 0.12
SCLT1-202ENST00000439369 CRY2Q49AN0 593 aa15.8■□□□□ 0.12
SCLT1-202ENST00000439369 SIRT2Q8IXJ6 389 aa15.8■□□□□ 0.12
SCLT1-202ENST00000439369 SGIP1Q9BQI5 828 aa15.8■□□□□ 0.12
SCLT1-202ENST00000439369 IFIT5Q13325 482 aaKnown RBP15.79■□□□□ 0.12
SCLT1-202ENST00000439369 CCDC57Q2TAC2 916 aa15.79■□□□□ 0.12
SCLT1-202ENST00000439369 SPON1Q9HCB6 807 aa15.79■□□□□ 0.12
SCLT1-202ENST00000439369 FBXO3Q9UK99 471 aa15.79■□□□□ 0.12
SCLT1-202ENST00000439369 GTF3C3Q9Y5Q9 886 aa15.79■□□□□ 0.12
SCLT1-202ENST00000439369 PNMA6EA0A0J9YXQ4 647 aa15.78■□□□□ 0.12
SCLT1-202ENST00000439369 HSP90AB4PQ58FF6 505 aa15.78■□□□□ 0.12
SCLT1-202ENST00000439369 CCDC136Q96JN2 1154 aa15.78■□□□□ 0.12
SCLT1-202ENST00000439369 COPRSQ9NQ92 184 aa15.78■□□□□ 0.12
SCLT1-202ENST00000439369 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
SCLT1-202ENST00000439369 TNRC6CQ9HCJ0 1690 aaKnown RBP15.78■□□□□ 0.12
SCLT1-202ENST00000439369 ANKRD18BA2A2Z9 1011 aa15.77■□□□□ 0.12
SCLT1-202ENST00000439369 HOXA10P31260 410 aaPredicted RBP15.77■□□□□ 0.12
SCLT1-202ENST00000439369 PTGER2P43116 358 aa15.77■□□□□ 0.12
SCLT1-202ENST00000439369 CDC5LQ99459 802 aaKnown RBP15.77■□□□□ 0.12
SCLT1-202ENST00000439369 NOP58Q9Y2X3 529 aaKnown RBP15.77■□□□□ 0.12
SCLT1-202ENST00000439369 KIF13BQ9NQT8 1826 aa15.77■□□□□ 0.11
SCLT1-202ENST00000439369 ANKRD31Q8N7Z5 1873 aa15.76■□□□□ 0.11
SCLT1-202ENST00000439369 ITGA6P23229 1130 aa15.76■□□□□ 0.11
SCLT1-202ENST00000439369 RFX5P48382 616 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-202ENST00000439369 FAM161AQ3B820 660 aa15.76■□□□□ 0.11
SCLT1-202ENST00000439369 CENPQQ7L2Z9 268 aaPredicted RBP15.76■□□□□ 0.11
SCLT1-202ENST00000439369 GCC1Q96CN9 775 aa15.76■□□□□ 0.11
SCLT1-202ENST00000439369 GREM2Q9H772 168 aa15.76■□□□□ 0.11
SCLT1-202ENST00000439369 CHMP3Q9Y3E7 222 aa15.76■□□□□ 0.11
SCLT1-202ENST00000439369 LRP5O75197 1615 aa15.76■□□□□ 0.11
SCLT1-202ENST00000439369 NPR1P16066 1061 aa15.75■□□□□ 0.11
SCLT1-202ENST00000439369 C3orf67Q6ZVT6 689 aa15.75■□□□□ 0.11
SCLT1-202ENST00000439369 DDX46Q7L014 1031 aaKnown RBP15.75■□□□□ 0.11
SCLT1-202ENST00000439369 SMC5Q8IY18 1101 aa15.75■□□□□ 0.11
SCLT1-202ENST00000439369 RPGRQ92834 1020 aaKnown RBP15.75■□□□□ 0.11
SCLT1-202ENST00000439369 RBM17Q96I25 401 aaKnown RBP15.75■□□□□ 0.11
SCLT1-202ENST00000439369 CRAMP1Q96RY5 1269 aa15.75■□□□□ 0.11
SCLT1-202ENST00000439369 DCTPP1Q9H773 170 aa15.75■□□□□ 0.11
SCLT1-202ENST00000439369 CD2APQ9Y5K6 639 aa15.75■□□□□ 0.11
SCLT1-202ENST00000439369 RAB11FIP3O75154 756 aa15.74■□□□□ 0.11
SCLT1-202ENST00000439369 CIAO1O76071 339 aa15.74■□□□□ 0.11
SCLT1-202ENST00000439369 SRGNP10124 158 aa15.74■□□□□ 0.11
SCLT1-202ENST00000439369 TGFB2P61812 414 aa15.74■□□□□ 0.11
SCLT1-202ENST00000439369 PTPN12Q05209 780 aaKnown RBP15.74■□□□□ 0.11
SCLT1-202ENST00000439369 TAF7LQ5H9L4 462 aa15.74■□□□□ 0.11
SCLT1-202ENST00000439369 STYK1Q6J9G0 422 aa15.74■□□□□ 0.11
SCLT1-202ENST00000439369 TMC4Q7Z404 712 aa15.74■□□□□ 0.11
SCLT1-202ENST00000439369 CCDC24Q8N4L8 307 aa15.74■□□□□ 0.11
SCLT1-202ENST00000439369 KDM2BQ8NHM5 1336 aa15.73■□□□□ 0.11
SCLT1-202ENST00000439369 H0YIN7 160 aa15.73■□□□□ 0.11
SCLT1-202ENST00000439369 IGHDP01880 384 aa15.73■□□□□ 0.11
SCLT1-202ENST00000439369 ERC1Q8IUD2 1116 aa15.73■□□□□ 0.11
SCLT1-202ENST00000439369 MASTLQ96GX5 879 aa15.73■□□□□ 0.11
SCLT1-202ENST00000439369 ALDH1B1P30837 517 aa15.72■□□□□ 0.11
SCLT1-202ENST00000439369 IGHMBP2P38935 993 aaKnown RBP15.72■□□□□ 0.11
SCLT1-202ENST00000439369 GRAPQ13588 217 aa15.72■□□□□ 0.11
SCLT1-202ENST00000439369 ANKRD18AQ8IVF6 992 aa15.72■□□□□ 0.11
SCLT1-202ENST00000439369 GRAPLQ8TC17 118 aaPredicted RBP15.72■□□□□ 0.11
SCLT1-202ENST00000439369 EYA2O00167 538 aa15.71■□□□□ 0.11
SCLT1-202ENST00000439369 SURF6O75683 361 aaKnown RBP15.71■□□□□ 0.11
SCLT1-202ENST00000439369 BBOX1O75936 387 aa15.71■□□□□ 0.11
SCLT1-202ENST00000439369 IL15P40933 162 aaPredicted RBP15.71■□□□□ 0.11
SCLT1-202ENST00000439369 RPS8P62241 208 aaKnown RBP15.71■□□□□ 0.11
SCLT1-202ENST00000439369 G3BP1Q13283 466 aaKnown RBP eCLIP15.71■□□□□ 0.11
SCLT1-202ENST00000439369 C2CD5Q86YS7 1000 aa15.71■□□□□ 0.11
SCLT1-202ENST00000439369 CCDC85AQ96PX6 553 aaPredicted RBP15.71■□□□□ 0.11
SCLT1-202ENST00000439369 BSDC1Q9NW68 430 aaPredicted RBP15.71■□□□□ 0.11
SCLT1-202ENST00000439369 DLEC1Q9Y238 1755 aa15.71■□□□□ 0.11
SCLT1-202ENST00000439369 COL11A2P13942 1736 aaPredicted RBP15.71■□□□□ 0.1
SCLT1-202ENST00000439369 LDHAL6AQ6ZMR3 332 aa15.7■□□□□ 0.1
SCLT1-202ENST00000439369 CNKSR1Q969H4 720 aa15.7■□□□□ 0.1
SCLT1-202ENST00000439369 MPHOSPH8Q99549 860 aa15.7■□□□□ 0.1
SCLT1-202ENST00000439369 SEC31BQ9NQW1 1179 aa15.7■□□□□ 0.1
SCLT1-202ENST00000439369 B4GALNT3Q6L9W6 998 aa15.69■□□□□ 0.1
SCLT1-202ENST00000439369 KIF1BPQ96EK5 621 aa15.69■□□□□ 0.1
SCLT1-202ENST00000439369 PA2G4Q9UQ80 394 aaKnown RBP15.69■□□□□ 0.1
SCLT1-202ENST00000439369 RIPOR2Q9Y4F9 1068 aa15.69■□□□□ 0.1
SCLT1-202ENST00000439369 MROH5Q6ZUA9 1318 aa15.68■□□□□ 0.1
SCLT1-202ENST00000439369 OS9Q13438 667 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-202ENST00000439369 ATG9AQ7Z3C6 839 aa15.68■□□□□ 0.1
SCLT1-202ENST00000439369 KLHDC4Q8TBB5 520 aa15.68■□□□□ 0.1
SCLT1-202ENST00000439369 CELF1Q92879 486 aaKnown RBP15.68■□□□□ 0.1
SCLT1-202ENST00000439369 ZNF594Q96JF6 807 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-202ENST00000439369 LRRCC1Q9C099 1032 aa15.68■□□□□ 0.1
SCLT1-202ENST00000439369 GPR108Q9NPR9 543 aa15.68■□□□□ 0.1
SCLT1-202ENST00000439369 CNNM1Q9NRU3 951 aa15.68■□□□□ 0.1
SCLT1-202ENST00000439369 EXOC6BQ9Y2D4 811 aa15.68■□□□□ 0.1
SCLT1-202ENST00000439369 KIAA1551Q9HCM1 1747 aa15.68■□□□□ 0.1
SCLT1-202ENST00000439369 NUCB1Q02818 461 aa15.67■□□□□ 0.1
SCLT1-202ENST00000439369 SIL1Q9H173 461 aa15.67■□□□□ 0.1
SCLT1-202ENST00000439369 ZBTB47Q9UFB7 747 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-202ENST00000439369 GRIPAP1Q4V328 841 aa15.66■□□□□ 0.1
SCLT1-202ENST00000439369 RHPN1Q8TCX5 695 aa15.66■□□□□ 0.1
SCLT1-202ENST00000439369 ANKRD2Q9GZV1 360 aa15.66■□□□□ 0.1
SCLT1-202ENST00000439369 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms