RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 MAP4K4O95819 1239 aaPredicted RBP20.38■□□□□ 0.85
GSE1-206ENST00000438180 ATP5JP18859 108 aa20.38■□□□□ 0.85
GSE1-206ENST00000438180 ANP32EQ9BTT0 268 aa20.38■□□□□ 0.85
GSE1-206ENST00000438180 UTP14AQ9BVJ6 771 aaKnown RBP20.38■□□□□ 0.85
GSE1-206ENST00000438180 DIAPH3Q9NSV4 1193 aa20.38■□□□□ 0.85
GSE1-206ENST00000438180 SH3TC1Q8TE82 1336 aa20.38■□□□□ 0.85
GSE1-206ENST00000438180 TLR7Q9NYK1 1049 aaKnown RBP20.37■□□□□ 0.85
GSE1-206ENST00000438180 CEP126Q9P2H0 1117 aa20.37■□□□□ 0.85
GSE1-206ENST00000438180 AKAP2Q9Y2D5 859 aa20.37■□□□□ 0.85
GSE1-206ENST00000438180 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.37■□□□□ 0.85
GSE1-206ENST00000438180 ANKRD18BA2A2Z9 1011 aa20.36■□□□□ 0.85
GSE1-206ENST00000438180 TTLL11Q8NHH1 800 aa20.36■□□□□ 0.85
GSE1-206ENST00000438180 KIF2CQ99661 725 aa20.36■□□□□ 0.85
GSE1-206ENST00000438180 DBNLQ9UJU6 430 aaKnown RBP20.36■□□□□ 0.85
GSE1-206ENST00000438180 CCNL1Q9UK58 526 aaPredicted RBP20.36■□□□□ 0.85
GSE1-206ENST00000438180 ZNF609O15014 1411 aa20.36■□□□□ 0.85
GSE1-206ENST00000438180 LAMB2P55268 1798 aa20.36■□□□□ 0.85
GSE1-206ENST00000438180 SCN7AQ01118 1682 aa20.36■□□□□ 0.85
GSE1-206ENST00000438180 ANO2Q9NQ90 1003 aa20.36■□□□□ 0.85
GSE1-206ENST00000438180 IL27Q8NEV9 243 aa20.35■□□□□ 0.85
GSE1-206ENST00000438180 BCL11BQ9C0K0 894 aaPredicted RBP20.35■□□□□ 0.85
GSE1-206ENST00000438180 NIP7Q9Y221 180 aaKnown RBP eCLIP20.35■□□□□ 0.85
GSE1-206ENST00000438180 SGSM2O43147 1006 aa20.34■□□□□ 0.85
GSE1-206ENST00000438180 RPS6KA4O75676 772 aa20.34■□□□□ 0.85
GSE1-206ENST00000438180 ITGA6P23229 1130 aa20.34■□□□□ 0.85
GSE1-206ENST00000438180 ZNF594Q96JF6 807 aaPredicted RBP20.34■□□□□ 0.85
GSE1-206ENST00000438180 RFX7Q2KHR2 1363 aa20.34■□□□□ 0.85
GSE1-206ENST00000438180 TAF1LQ8IZX4 1826 aa20.34■□□□□ 0.85
GSE1-206ENST00000438180 HMGB2P26583 209 aaKnown RBP20.33■□□□□ 0.85
GSE1-206ENST00000438180 ANAPC15P60006 121 aa20.33■□□□□ 0.85
GSE1-206ENST00000438180 LRRC24Q50LG9 513 aa20.33■□□□□ 0.85
GSE1-206ENST00000438180 SUSD4Q5VX71 490 aa20.33■□□□□ 0.85
GSE1-206ENST00000438180 KIAA1211Q6ZU35 1233 aa20.33■□□□□ 0.85
GSE1-206ENST00000438180 TICAM2Q86XR7 235 aa20.33■□□□□ 0.85
GSE1-206ENST00000438180 BOLA2Q9H3K6 86 aa20.33■□□□□ 0.85
GSE1-206ENST00000438180 RAD50Q92878 1312 aa20.33■□□□□ 0.84
GSE1-206ENST00000438180 FAM196AQ6ZSG2 479 aa20.33■□□□□ 0.84
GSE1-206ENST00000438180 DBNDD2Q9BQY9 259 aa20.33■□□□□ 0.84
GSE1-206ENST00000438180 FAM182BQ5T319 152 aa20.32■□□□□ 0.84
GSE1-206ENST00000438180 PTF1AQ7RTS3 328 aa20.32■□□□□ 0.84
GSE1-206ENST00000438180 SYNE4Q8N205 404 aa20.32■□□□□ 0.84
GSE1-206ENST00000438180 NEUROD6Q96NK8 337 aa20.32■□□□□ 0.84
GSE1-206ENST00000438180 GREM2Q9H772 168 aa20.32■□□□□ 0.84
GSE1-206ENST00000438180 ZNF772Q68DY9 489 aaPredicted RBP20.31■□□□□ 0.84
GSE1-206ENST00000438180 LDHAL6AQ6ZMR3 332 aa20.31■□□□□ 0.84
GSE1-206ENST00000438180 FSD1Q9BTV5 496 aa20.31■□□□□ 0.84
GSE1-206ENST00000438180 RTCBQ9Y3I0 505 aaKnown RBP20.31■□□□□ 0.84
GSE1-206ENST00000438180 ST18O60284 1047 aa20.3■□□□□ 0.84
GSE1-206ENST00000438180 NTSR2O95665 410 aa20.3■□□□□ 0.84
GSE1-206ENST00000438180 CWC27Q6UX04 472 aaKnown RBP20.3■□□□□ 0.84
GSE1-206ENST00000438180 HAUS7Q99871 368 aa20.3■□□□□ 0.84
GSE1-206ENST00000438180 RTL9Q8NET4 1388 aa20.3■□□□□ 0.84
GSE1-206ENST00000438180 SPEF2Q9C093 1822 aa20.3■□□□□ 0.84
GSE1-206ENST00000438180 A0A1B0GUL7 405 aa20.3■□□□□ 0.84
GSE1-206ENST00000438180 GNPATO15228 680 aa20.3■□□□□ 0.84
GSE1-206ENST00000438180 CCDC152Q4G0S7 254 aa20.3■□□□□ 0.84
GSE1-206ENST00000438180 KRT27Q7Z3Y8 459 aa20.3■□□□□ 0.84
GSE1-206ENST00000438180 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.3■□□□□ 0.84
GSE1-206ENST00000438180 CCDC85AQ96PX6 553 aaPredicted RBP20.3■□□□□ 0.84
GSE1-206ENST00000438180 PUS3Q9BZE2 481 aaKnown RBP20.3■□□□□ 0.84
GSE1-206ENST00000438180 CNNM1Q9NRU3 951 aa20.3■□□□□ 0.84
GSE1-206ENST00000438180 NARFQ9UHQ1 456 aa20.3■□□□□ 0.84
GSE1-206ENST00000438180 DDX60Q8IY21 1712 aaKnown RBP20.3■□□□□ 0.84
GSE1-206ENST00000438180 LRP5O75197 1615 aa20.29■□□□□ 0.84
GSE1-206ENST00000438180 C4BP0C0L5 1744 aa20.29■□□□□ 0.84
GSE1-206ENST00000438180 ZPR1O75312 459 aa20.29■□□□□ 0.84
GSE1-206ENST00000438180 METTL24Q5JXM2 366 aa20.29■□□□□ 0.84
GSE1-206ENST00000438180 ABCC12Q96J65 1359 aa20.29■□□□□ 0.84
GSE1-206ENST00000438180 CCDC158Q5M9N0 1113 aa20.28■□□□□ 0.84
GSE1-206ENST00000438180 IL17RAQ96F46 866 aa20.28■□□□□ 0.84
GSE1-206ENST00000438180 RIPOR2Q9Y4F9 1068 aa20.28■□□□□ 0.84
GSE1-206ENST00000438180 BRWD3Q6RI45 1802 aa20.28■□□□□ 0.84
GSE1-206ENST00000438180 K7ELQ4 463 aaPredicted RBP20.27■□□□□ 0.84
GSE1-206ENST00000438180 KCNQ4P56696 695 aa20.27■□□□□ 0.84
GSE1-206ENST00000438180 NYXQ9GZU5 481 aa20.27■□□□□ 0.84
GSE1-206ENST00000438180 RIC1Q4ADV7 1423 aa20.27■□□□□ 0.84
GSE1-206ENST00000438180 TIMM10P62072 90 aa20.27■□□□□ 0.83
GSE1-206ENST00000438180 GORABQ5T7V8 394 aa20.27■□□□□ 0.83
GSE1-206ENST00000438180 MROH5Q6ZUA9 1318 aa20.26■□□□□ 0.83
GSE1-206ENST00000438180 FAM177BA6PVY3 158 aa20.26■□□□□ 0.83
GSE1-206ENST00000438180 HCLS1P14317 486 aaPredicted RBP20.26■□□□□ 0.83
GSE1-206ENST00000438180 SLC27A3Q5K4L6 730 aa20.26■□□□□ 0.83
GSE1-206ENST00000438180 DNAJC2Q99543 621 aaKnown RBP20.26■□□□□ 0.83
GSE1-206ENST00000438180 HSPA4P34932 840 aa20.25■□□□□ 0.83
GSE1-206ENST00000438180 RBM6P78332 1123 aaKnown RBP20.25■□□□□ 0.83
GSE1-206ENST00000438180 ATP2B3Q16720 1220 aa20.25■□□□□ 0.83
GSE1-206ENST00000438180 LSG1Q9H089 658 aaKnown RBP20.25■□□□□ 0.83
GSE1-206ENST00000438180 SNRKQ9NRH2 765 aa20.25■□□□□ 0.83
GSE1-206ENST00000438180 COL24A1Q17RW2 1714 aa20.25■□□□□ 0.83
GSE1-206ENST00000438180 ADRA2BP18089 450 aa20.24■□□□□ 0.83
GSE1-206ENST00000438180 LRRFIP1Q32MZ4 808 aaKnown RBP20.24■□□□□ 0.83
GSE1-206ENST00000438180 IFIT1P09914 478 aaKnown RBP20.24■□□□□ 0.83
GSE1-206ENST00000438180 MCM2P49736 904 aa20.24■□□□□ 0.83
GSE1-206ENST00000438180 NMIQ13287 307 aaPredicted RBP20.24■□□□□ 0.83
GSE1-206ENST00000438180 TTC39AQ5SRH9 613 aa20.24■□□□□ 0.83
GSE1-206ENST00000438180 SETDB2Q96T68 719 aa20.24■□□□□ 0.83
GSE1-206ENST00000438180 MPHOSPH8Q99549 860 aa20.24■□□□□ 0.83
GSE1-206ENST00000438180 IL25Q9H293 177 aa20.24■□□□□ 0.83
GSE1-206ENST00000438180 SLKQ9H2G2 1235 aaPredicted RBP20.24■□□□□ 0.83
GSE1-206ENST00000438180 PAG1Q9NWQ8 432 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms