RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 HS1BP3Q53T59 392 aa12.43□□□□□ -0.42
CLSTN1-203ENST00000435891 SNRKQ9NRH2 765 aa12.43□□□□□ -0.42
CLSTN1-203ENST00000435891 CCDC129Q6ZRS4 1044 aa12.43□□□□□ -0.42
CLSTN1-203ENST00000435891 SNRPA1P09661 255 aaKnown RBP12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 HCLS1P14317 486 aaPredicted RBP12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 UBE2HP62256 183 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 SLFNL1Q499Z3 407 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 OFD1O75665 1012 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 CCDC183Q5T5S1 534 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 CDC37L1Q7L3B6 337 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 TTC5Q8N0Z6 440 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 COPRSQ9NQ92 184 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 SH2B1Q9NRF2 756 aaPredicted RBP12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 ZKSCAN5Q9Y2L8 839 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 TAF5LO75529 589 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 TOB2Q14106 344 aaPredicted RBP12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 TNNI3KQ59H18 835 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 GIMAP6Q6P9H5 292 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 DBNDD2Q9BQY9 259 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 FPGT-TNNI3KV9GXZ4 949 aa12.42□□□□□ -0.42
CLSTN1-203ENST00000435891 STK3Q13188 491 aa12.41□□□□□ -0.42
CLSTN1-203ENST00000435891 ZSCAN31Q96LW9 406 aaPredicted RBP12.41□□□□□ -0.42
CLSTN1-203ENST00000435891 LMTK3Q96Q04 1460 aa12.41□□□□□ -0.42
CLSTN1-203ENST00000435891 A0A087WZG4 1122 aa12.41□□□□□ -0.42
CLSTN1-203ENST00000435891 MST1RQ04912 1400 aa12.41□□□□□ -0.42
CLSTN1-203ENST00000435891 USP25Q9UHP3 1055 aa12.41□□□□□ -0.42
CLSTN1-203ENST00000435891 TMEM94Q12767 1356 aa12.41□□□□□ -0.42
CLSTN1-203ENST00000435891 HIP1O00291 1037 aa12.41□□□□□ -0.42
CLSTN1-203ENST00000435891 BLOC1S2Q6QNY1 142 aa12.41□□□□□ -0.42
CLSTN1-203ENST00000435891 DCAF5Q96JK2 942 aa12.41□□□□□ -0.42
CLSTN1-203ENST00000435891 DNAJC2Q99543 621 aaKnown RBP12.41□□□□□ -0.42
CLSTN1-203ENST00000435891 MRC1P22897 1456 aa12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 LARP1BQ659C4 914 aaKnown RBP12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 PAXIP1Q6ZW49 1069 aaPredicted RBP12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 COL18A1P39060 1754 aa12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 ZNF500O60304 480 aaPredicted RBP12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 PHF14O94880 888 aa12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 ATF3P18847 181 aa12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 RPS6KB1P23443 525 aa12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 CASP7P55210 303 aa12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 SMAP1Q8IYB5 467 aaPredicted RBP12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 FMNL2Q96PY5 1086 aa12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 NBPF26B4DH59 902 aa12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 RABL6Q3YEC7 729 aaPredicted RBP12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 NBPF14Q5TI25 921 aa12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 NBPF10Q6P3W6 841 aaKnown RBP12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 DDX46Q7L014 1031 aaKnown RBP12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 NBPF15Q8N660 670 aa12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 CHMP3Q9Y3E7 222 aa12.4□□□□□ -0.42
CLSTN1-203ENST00000435891 ATP5JP18859 108 aa12.39□□□□□ -0.43
CLSTN1-203ENST00000435891 TTC6Q86TZ1 520 aa12.39□□□□□ -0.43
CLSTN1-203ENST00000435891 ZNF830Q96NB3 372 aaPredicted RBP12.39□□□□□ -0.43
CLSTN1-203ENST00000435891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.39□□□□□ -0.435e-7■■□□□ 12.1
CLSTN1-203ENST00000435891 KIF1AQ12756 1690 aa12.39□□□□□ -0.43
CLSTN1-203ENST00000435891 CABP4P57796 275 aa12.39□□□□□ -0.43
CLSTN1-203ENST00000435891 LMBR1LQ6UX01 489 aa12.39□□□□□ -0.43
CLSTN1-203ENST00000435891 ATP6V1DQ9Y5K8 247 aa12.39□□□□□ -0.43
CLSTN1-203ENST00000435891 ZNF609O15014 1411 aa12.39□□□□□ -0.43
CLSTN1-203ENST00000435891 JCADQ9P266 1359 aa12.39□□□□□ -0.43
CLSTN1-203ENST00000435891 CBX1P83916 185 aa12.39□□□□□ -0.43
CLSTN1-203ENST00000435891 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
CLSTN1-203ENST00000435891 FUCA2Q9BTY2 467 aa12.39□□□□□ -0.43
CLSTN1-203ENST00000435891 PSMA5P28066 241 aa12.38□□□□□ -0.43
CLSTN1-203ENST00000435891 LRRC2Q9BYS8 371 aa12.38□□□□□ -0.43
CLSTN1-203ENST00000435891 CCDC39Q9UFE4 941 aa12.38□□□□□ -0.43
CLSTN1-203ENST00000435891 JAK2O60674 1132 aa12.38□□□□□ -0.43
CLSTN1-203ENST00000435891 RNF20Q5VTR2 975 aa12.38□□□□□ -0.43
CLSTN1-203ENST00000435891 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.38□□□□□ -0.431e-7■■■■■ 27.2
CLSTN1-203ENST00000435891 AFDNP55196 1824 aaKnown RBP12.38□□□□□ -0.43
CLSTN1-203ENST00000435891 AP5Z1O43299 807 aa12.37□□□□□ -0.43
CLSTN1-203ENST00000435891 GLI3P10071 1580 aa12.37□□□□□ -0.43
CLSTN1-203ENST00000435891 A0A0G2JLW4 131 aa12.37□□□□□ -0.43
CLSTN1-203ENST00000435891 PTMAP06454 111 aaKnown RBP12.37□□□□□ -0.43
CLSTN1-203ENST00000435891 CYP21A2P08686 494 aa12.37□□□□□ -0.43
CLSTN1-203ENST00000435891 USPL1Q5W0Q7 1092 aa12.37□□□□□ -0.43
CLSTN1-203ENST00000435891 TFIP11Q9UBB9 837 aaKnown RBP12.37□□□□□ -0.43
CLSTN1-203ENST00000435891 ARFGEF2Q9Y6D5 1785 aa12.37□□□□□ -0.43
CLSTN1-203ENST00000435891 TIMM10P62072 90 aa12.37□□□□□ -0.43
CLSTN1-203ENST00000435891 FOXO4P98177 505 aa12.37□□□□□ -0.43
CLSTN1-203ENST00000435891 A1BGP04217 495 aa12.36□□□□□ -0.43
CLSTN1-203ENST00000435891 LIG1P18858 919 aa12.36□□□□□ -0.43
CLSTN1-203ENST00000435891 GTF2E1P29083 439 aaPredicted RBP12.36□□□□□ -0.43
CLSTN1-203ENST00000435891 PLBD2Q8NHP8 589 aa12.36□□□□□ -0.43
CLSTN1-203ENST00000435891 ADCY5O95622 1261 aa12.36□□□□□ -0.43
CLSTN1-203ENST00000435891 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
CLSTN1-203ENST00000435891 IGSF3O75054 1194 aa12.36□□□□□ -0.43
CLSTN1-203ENST00000435891 TSGA10IPQ3SY00 556 aa12.36□□□□□ -0.43
CLSTN1-203ENST00000435891 STOX1Q6ZVD7 989 aa12.36□□□□□ -0.43
CLSTN1-203ENST00000435891 ATG9AQ7Z3C6 839 aa12.36□□□□□ -0.43
CLSTN1-203ENST00000435891 HAUS7Q99871 368 aa12.36□□□□□ -0.43
CLSTN1-203ENST00000435891 STRCP1A6NGW2 1772 aa12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 CAMK4Q16566 473 aa12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 FAM184AQ8NB25 1140 aa12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 DDX11Q96FC9 970 aa12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 NEUROD6Q96NK8 337 aa12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 PPP4R3BQ5MIZ7 849 aa12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 NEK1Q96PY6 1258 aa12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 TTC12Q9H892 705 aaPredicted RBP12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 PLCB2Q00722 1185 aa12.35□□□□□ -0.43
CLSTN1-203ENST00000435891 LRRC24Q50LG9 513 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms