RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 PNMA8AQ86V59 439 aaPredicted RBP17.17■□□□□ 0.34
EDEM1-202ENST00000434243 TRIM28Q13263 835 aaKnown RBP17.16■□□□□ 0.34
EDEM1-202ENST00000434243 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
EDEM1-202ENST00000434243 STK31Q9BXU1 1019 aa17.16■□□□□ 0.34
EDEM1-202ENST00000434243 VPS33BQ9H267 617 aa17.16■□□□□ 0.34
EDEM1-202ENST00000434243 SF3B3Q15393 1217 aaKnown RBP17.15■□□□□ 0.34
EDEM1-202ENST00000434243 TMC4Q7Z404 712 aa17.15■□□□□ 0.34
EDEM1-202ENST00000434243 ZBTB38Q8NAP3 1195 aaPredicted RBP17.15■□□□□ 0.34
EDEM1-202ENST00000434243 JMYQ8N9B5 988 aa17.14■□□□□ 0.33
EDEM1-202ENST00000434243 JARID2Q92833 1246 aaPredicted RBP17.14■□□□□ 0.33
EDEM1-202ENST00000434243 CELF1Q92879 486 aaKnown RBP17.14■□□□□ 0.33
EDEM1-202ENST00000434243 RTFDC1Q9BY42 306 aaPredicted RBP17.14■□□□□ 0.33
EDEM1-202ENST00000434243 ZNRF3Q9ULT6 936 aa17.14■□□□□ 0.33
EDEM1-202ENST00000434243 HSP90B1P14625 803 aaKnown RBP17.13■□□□□ 0.33
EDEM1-202ENST00000434243 TWISTNBQ3B726 338 aaPredicted RBP17.13■□□□□ 0.33
EDEM1-202ENST00000434243 MAP1SQ66K74 1059 aaPredicted RBP17.13■□□□□ 0.33
EDEM1-202ENST00000434243 CCDC191Q8NCU4 936 aa17.13■□□□□ 0.33
EDEM1-202ENST00000434243 METTL22Q9BUU2 404 aaPredicted RBP17.13■□□□□ 0.33
EDEM1-202ENST00000434243 CREBZFQ9NS37 354 aa17.13■□□□□ 0.33
EDEM1-202ENST00000434243 CWC25Q9NXE8 425 aaPredicted RBP17.13■□□□□ 0.33
EDEM1-202ENST00000434243 NSFL1CQ9UNZ2 370 aaKnown RBP17.13■□□□□ 0.33
EDEM1-202ENST00000434243 MAP3K2Q9Y2U5 619 aa17.13■□□□□ 0.33
EDEM1-202ENST00000434243 COL4A5P29400 1685 aa17.13■□□□□ 0.33
EDEM1-202ENST00000434243 ANKRD36CQ5JPF3 1778 aa17.12■□□□□ 0.33
EDEM1-202ENST00000434243 EPS15P42566 896 aa17.12■□□□□ 0.33
EDEM1-202ENST00000434243 KIAA2012Q0VF49 1180 aa17.12■□□□□ 0.33
EDEM1-202ENST00000434243 CNTROBQ8N137 903 aa17.12■□□□□ 0.33
EDEM1-202ENST00000434243 MKRN1Q9UHC7 482 aaKnown RBP17.12■□□□□ 0.33
EDEM1-202ENST00000434243 PI4KAP2A4QPH2 592 aa17.11■□□□□ 0.33
EDEM1-202ENST00000434243 C6orf229H3BNL8 230 aa17.11■□□□□ 0.33
EDEM1-202ENST00000434243 PCCAP05165 728 aaPredicted RBP17.11■□□□□ 0.33
EDEM1-202ENST00000434243 SCNN1DP51172 638 aa17.11■□□□□ 0.33
EDEM1-202ENST00000434243 RPS8P62241 208 aaKnown RBP17.11■□□□□ 0.33
EDEM1-202ENST00000434243 CXCL9Q07325 125 aa17.11■□□□□ 0.33
EDEM1-202ENST00000434243 KSR2Q6VAB6 950 aa17.11■□□□□ 0.33
EDEM1-202ENST00000434243 FAM9BQ8IZU0 186 aa17.11■□□□□ 0.33
EDEM1-202ENST00000434243 PI4KAP1Q8N8J0 262 aa17.11■□□□□ 0.33
EDEM1-202ENST00000434243 CCDC85AQ96PX6 553 aaPredicted RBP17.11■□□□□ 0.33
EDEM1-202ENST00000434243 BCL2L13Q9BXK5 485 aa17.11■□□□□ 0.33
EDEM1-202ENST00000434243 RIMBP2O15034 1052 aa17.1■□□□□ 0.33
EDEM1-202ENST00000434243 RAD17O75943 681 aa17.1■□□□□ 0.33
EDEM1-202ENST00000434243 ITGBL1O95965 494 aaPredicted RBP17.1■□□□□ 0.33
EDEM1-202ENST00000434243 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
EDEM1-202ENST00000434243 NEXNQ0ZGT2 675 aa17.1■□□□□ 0.33
EDEM1-202ENST00000434243 WASHC4Q2M389 1173 aa17.1■□□□□ 0.33
EDEM1-202ENST00000434243 CIAPIN1Q6FI81 312 aa17.1■□□□□ 0.33
EDEM1-202ENST00000434243 SEC31BQ9NQW1 1179 aa17.1■□□□□ 0.33
EDEM1-202ENST00000434243 IL16Q14005 1332 aa17.1■□□□□ 0.33
EDEM1-202ENST00000434243 PASKQ96RG2 1323 aa17.1■□□□□ 0.33
EDEM1-202ENST00000434243 TMEM88BA6NKF7 163 aa17.09■□□□□ 0.33
EDEM1-202ENST00000434243 PDE8AO60658 829 aa17.09■□□□□ 0.33
EDEM1-202ENST00000434243 GPSM2P81274 684 aa17.09■□□□□ 0.33
EDEM1-202ENST00000434243 TNIP1Q15025 636 aa17.09■□□□□ 0.33
EDEM1-202ENST00000434243 CCDC152Q4G0S7 254 aa17.09■□□□□ 0.33
EDEM1-202ENST00000434243 SCN4AP35499 1836 aa17.09■□□□□ 0.33
EDEM1-202ENST00000434243 CEP350Q5VT06 3117 aa17.09■□□□□ 0.33
EDEM1-202ENST00000434243 GMPSP49915 693 aaPredicted RBP17.08■□□□□ 0.32
EDEM1-202ENST00000434243 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
EDEM1-202ENST00000434243 USP50Q70EL3 339 aaPredicted RBP17.08■□□□□ 0.32
EDEM1-202ENST00000434243 G2E3Q7L622 706 aa17.08■□□□□ 0.32
EDEM1-202ENST00000434243 WDR63Q8IWG1 891 aa17.08■□□□□ 0.32
EDEM1-202ENST00000434243 EYA3Q99504 573 aa17.08■□□□□ 0.32
EDEM1-202ENST00000434243 GPRC5DQ9NZD1 345 aa17.08■□□□□ 0.32
EDEM1-202ENST00000434243 FANCIQ9NVI1 1328 aa17.07■□□□□ 0.32
EDEM1-202ENST00000434243 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
EDEM1-202ENST00000434243 DBNDD1Q9H9R9 158 aa17.07■□□□□ 0.32
EDEM1-202ENST00000434243 ADARB2Q9NS39 739 aaKnown RBP17.07■□□□□ 0.32
EDEM1-202ENST00000434243 ANKIB1Q9P2G1 1089 aa17.07■□□□□ 0.32
EDEM1-202ENST00000434243 POLLQ9UGP5 575 aa17.07■□□□□ 0.32
EDEM1-202ENST00000434243 LAMB2P55268 1798 aa17.07■□□□□ 0.32
EDEM1-202ENST00000434243 YDJCA8MPS7 323 aa17.06■□□□□ 0.32
EDEM1-202ENST00000434243 G3V3G9 751 aa17.06■□□□□ 0.32
EDEM1-202ENST00000434243 IGKV5-2P06315 115 aa17.06■□□□□ 0.32
EDEM1-202ENST00000434243 CWF19L2Q2TBE0 894 aaKnown RBP17.06■□□□□ 0.32
EDEM1-202ENST00000434243 DCAF8Q5TAQ9 597 aa17.06■□□□□ 0.32
EDEM1-202ENST00000434243 GPR101Q96P66 508 aaPredicted RBP17.06■□□□□ 0.32
EDEM1-202ENST00000434243 HSPA1AP0DMV8 641 aaKnown RBP17.05■□□□□ 0.32
EDEM1-202ENST00000434243 HSPA1BP0DMV9 641 aaKnown RBP17.05■□□□□ 0.32
EDEM1-202ENST00000434243 EXOSC9Q06265 439 aaKnown RBP17.05■□□□□ 0.32
EDEM1-202ENST00000434243 FKBP5Q13451 457 aaPredicted RBP17.05■□□□□ 0.32
EDEM1-202ENST00000434243 DOK7Q18PE1 504 aa17.05■□□□□ 0.32
EDEM1-202ENST00000434243 ANKRD18AQ8IVF6 992 aa17.05■□□□□ 0.32
EDEM1-202ENST00000434243 TBC1D16Q8TBP0 767 aa17.05■□□□□ 0.32
EDEM1-202ENST00000434243 ABT1Q9ULW3 272 aaKnown RBP17.05■□□□□ 0.32
EDEM1-202ENST00000434243 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
EDEM1-202ENST00000434243 CDHR2Q9BYE9 1310 aa17.04■□□□□ 0.32
EDEM1-202ENST00000434243 UFL1O94874 794 aa17.04■□□□□ 0.32
EDEM1-202ENST00000434243 FLIIQ13045 1269 aa17.04■□□□□ 0.32
EDEM1-202ENST00000434243 ZC3H12CQ9C0D7 883 aaKnown RBP17.04■□□□□ 0.32
EDEM1-202ENST00000434243 ZBTB12Q9Y330 459 aaPredicted RBP17.04■□□□□ 0.32
EDEM1-202ENST00000434243 NEURL1BA8MQ27 555 aa17.03■□□□□ 0.32
EDEM1-202ENST00000434243 H7C1D1 291 aa17.03■□□□□ 0.32
EDEM1-202ENST00000434243 ECE2O60344 883 aa17.03■□□□□ 0.32
EDEM1-202ENST00000434243 VAMP4O75379 141 aa17.03■□□□□ 0.32
EDEM1-202ENST00000434243 CTSWP56202 376 aa17.03■□□□□ 0.32
EDEM1-202ENST00000434243 CDC5LQ99459 802 aaKnown RBP17.03■□□□□ 0.32
EDEM1-202ENST00000434243 CNOT7Q9UIV1 285 aaKnown RBP17.03■□□□□ 0.32
EDEM1-202ENST00000434243 GGA1Q9UJY5 639 aa17.03■□□□□ 0.32
EDEM1-202ENST00000434243 CNTNAP1P78357 1384 aa17.02■□□□□ 0.32
EDEM1-202ENST00000434243 TAF1P21675 1872 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms