RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 NBR1Q14596 966 aa7.41□□□□□ -1.22
HMGB3P24-201ENST00000433260 DALRD3Q5D0E6 543 aaKnown RBP7.41□□□□□ -1.22
HMGB3P24-201ENST00000433260 PPP1R42Q7Z4L9 355 aa7.41□□□□□ -1.22
HMGB3P24-201ENST00000433260 SYNE4Q8N205 404 aa7.41□□□□□ -1.22
HMGB3P24-201ENST00000433260 PLBD2Q8NHP8 589 aa7.41□□□□□ -1.22
HMGB3P24-201ENST00000433260 JARID2Q92833 1246 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P24-201ENST00000433260 MYD88Q99836 296 aa7.41□□□□□ -1.22
HMGB3P24-201ENST00000433260 TRMT112Q9UI30 125 aaKnown RBP7.41□□□□□ -1.22
HMGB3P24-201ENST00000433260 UBN2Q6ZU65 1347 aa7.41□□□□□ -1.22
HMGB3P24-201ENST00000433260 CHD4Q14839 1912 aa7.4□□□□□ -1.22
HMGB3P24-201ENST00000433260 SLFN5Q08AF3 891 aa7.4□□□□□ -1.22
HMGB3P24-201ENST00000433260 HSP90AB3PQ58FF7 597 aa7.4□□□□□ -1.22
HMGB3P24-201ENST00000433260 DPY19L2Q6NUT2 758 aa7.4□□□□□ -1.22
HMGB3P24-201ENST00000433260 TTLL6Q8N841 843 aa7.4□□□□□ -1.22
HMGB3P24-201ENST00000433260 UTP14AQ9BVJ6 771 aaKnown RBP7.4□□□□□ -1.22
HMGB3P24-201ENST00000433260 CHMP4AQ9BY43 222 aa7.4□□□□□ -1.22
HMGB3P24-201ENST00000433260 NYXQ9GZU5 481 aa7.4□□□□□ -1.22
HMGB3P24-201ENST00000433260 METRNQ9UJH8 293 aa7.4□□□□□ -1.22
HMGB3P24-201ENST00000433260 MAP3K2Q9Y2U5 619 aa7.4□□□□□ -1.22
HMGB3P24-201ENST00000433260 BRCA1P38398 1863 aaKnown RBP7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 ANKRD36CQ5JPF3 1778 aa7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 ZNF521Q96K83 1311 aa7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 PI4KAP2A4QPH2 592 aa7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 C21orf2O43822 256 aa7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 DDX58O95786 925 aaKnown RBP7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 SRGNP10124 158 aa7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 HCLS1P14317 486 aaPredicted RBP7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 HNRNPUQ00839 825 aaKnown RBP eCLIP7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 KSR2Q6VAB6 950 aa7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 NLRP10Q86W26 655 aa7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 MICALL2Q8IY33 904 aa7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 PI4KAP1Q8N8J0 262 aa7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 FAM89AQ96GI7 184 aa7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 MASTLQ96GX5 879 aa7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 LARP6Q9BRS8 491 aaKnown RBP7.39□□□□□ -1.23
HMGB3P24-201ENST00000433260 CCDC88AQ3V6T2 1871 aa7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 ARFGEF2Q9Y6D5 1785 aa7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 E9PSI1 815 aa7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 NTSR2O95665 410 aa7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 FKBP5Q13451 457 aaPredicted RBP7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 PARP10Q53GL7 1025 aa7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 C3orf67Q6ZVT6 689 aa7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 TMC2Q8TDI7 906 aa7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 RPGRQ92834 1020 aaKnown RBP7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 CNKSR1Q969H4 720 aa7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 DDX27Q96GQ7 796 aaKnown RBP7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 NLRP3Q96P20 1036 aa7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 ISCA1Q9BUE6 129 aa7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 TAF1P21675 1872 aa7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 SLX4Q8IY92 1834 aa7.38□□□□□ -1.23
HMGB3P24-201ENST00000433260 ATP10DQ9P241 1426 aa7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 ARFGEF1Q9Y6D6 1849 aa7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 F6X3S4 739 aa7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 NPR1P16066 1061 aa7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 ALDH1B1P30837 517 aa7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 FLIIQ13045 1269 aa7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 CWF19L2Q2TBE0 894 aaKnown RBP7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 SLC10A5Q5PT55 438 aa7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 STYK1Q6J9G0 422 aa7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 OLFM4Q6UX06 510 aa7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 ZNF526Q8TF50 670 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 METTL22Q9BUU2 404 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 BCL2L13Q9BXK5 485 aa7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 PDZRN3Q9UPQ7 1066 aa7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 DLEC1Q9Y238 1755 aa7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 COL11A2P13942 1736 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P24-201ENST00000433260 ABCC12Q96J65 1359 aa7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 SH3TC1Q8TE82 1336 aa7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 TNRC6CQ9HCJ0 1690 aaKnown RBP7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 KLRG2A4D1S0 409 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 POTEIP0CG38 1075 aa7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 RASSF7Q02833 373 aa7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 NEXNQ0ZGT2 675 aa7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 E2F4Q16254 413 aa7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 PRPF40BQ6NWY9 871 aaKnown RBP7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 SLC4A10Q6U841 1118 aa7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 RBM17Q96I25 401 aaKnown RBP7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 CCDC85AQ96PX6 553 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 TMEM121BQ9BXQ6 578 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 CRISPLD2Q9H0B8 497 aa7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 COLQQ9Y215 455 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 CACNA1FO60840 1977 aa7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 LAMB2P55268 1798 aa7.36□□□□□ -1.23
HMGB3P24-201ENST00000433260 ADCY9O60503 1353 aa7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 SBF1O95248 1867 aa7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 IRS4O14654 1257 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 IGKV5-2P06315 115 aa7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 C9orf131Q5VYM1 1079 aa7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 SLC51AQ86UW1 340 aa7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 TRMT2AQ8IZ69 625 aaKnown RBP7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 MRPL50Q8N5N7 158 aaKnown RBP7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 ZBTB38Q8NAP3 1195 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 CCDC191Q8NCU4 936 aa7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 SSH1Q8WYL5 1049 aa7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 GPHNQ9NQX3 736 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 CWC25Q9NXE8 425 aaPredicted RBP7.35□□□□□ -1.23
HMGB3P24-201ENST00000433260 HOXA10P31260 410 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P24-201ENST00000433260 PRELPP51888 382 aa7.34□□□□□ -1.23
HMGB3P24-201ENST00000433260 TRIM28Q13263 835 aaKnown RBP7.34□□□□□ -1.23
HMGB3P24-201ENST00000433260 MFSD10Q14728 455 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 1603.7 ms