RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 CNKSR2Q8WXI2 1034 aa18.16■□□□□ 0.5
CSTF3-202ENST00000431742 CTSWP56202 376 aa18.15■□□□□ 0.5
CSTF3-202ENST00000431742 FTSJ3Q8IY81 847 aaKnown RBP18.15■□□□□ 0.5
CSTF3-202ENST00000431742 RPGRQ92834 1020 aaKnown RBP18.15■□□□□ 0.5
CSTF3-202ENST00000431742 ZNF622Q969S3 477 aaKnown RBP eCLIP18.15■□□□□ 0.55e-17■■□□□ 12.5
CSTF3-202ENST00000431742 KAZALD1Q96I82 304 aa18.15■□□□□ 0.5
CSTF3-202ENST00000431742 CRAMP1Q96RY5 1269 aa18.15■□□□□ 0.5
CSTF3-202ENST00000431742 PLIN1O60240 522 aa18.14■□□□□ 0.49
CSTF3-202ENST00000431742 YBX3P16989 372 aaKnown RBP eCLIP18.14■□□□□ 0.49
CSTF3-202ENST00000431742 FOXO4P98177 505 aa18.14■□□□□ 0.49
CSTF3-202ENST00000431742 DALRD3Q5D0E6 543 aaKnown RBP18.14■□□□□ 0.49
CSTF3-202ENST00000431742 TTLL6Q8N841 843 aa18.14■□□□□ 0.49
CSTF3-202ENST00000431742 CNKSR1Q969H4 720 aa18.14■□□□□ 0.49
CSTF3-202ENST00000431742 LTBP1Q14766 1721 aa18.14■□□□□ 0.49
CSTF3-202ENST00000431742 CSF1RP07333 972 aa18.13■□□□□ 0.49
CSTF3-202ENST00000431742 MS4A1P11836 297 aa18.13■□□□□ 0.49
CSTF3-202ENST00000431742 EPHA10Q5JZY3 1008 aa18.13■□□□□ 0.49
CSTF3-202ENST00000431742 PRPF40BQ6NWY9 871 aaKnown RBP18.13■□□□□ 0.49
CSTF3-202ENST00000431742 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.13■□□□□ 0.49
CSTF3-202ENST00000431742 TTLL11Q8NHH1 800 aa18.13■□□□□ 0.49
CSTF3-202ENST00000431742 PANK1Q8TE04 598 aa18.13■□□□□ 0.49
CSTF3-202ENST00000431742 RBM17Q96I25 401 aaKnown RBP18.13■□□□□ 0.49
CSTF3-202ENST00000431742 SUCLG2Q96I99 432 aa18.13■□□□□ 0.49
CSTF3-202ENST00000431742 MEIS3Q99687 375 aa18.13■□□□□ 0.49
CSTF3-202ENST00000431742 SBF1O95248 1867 aa18.13■□□□□ 0.49
CSTF3-202ENST00000431742 CCDC88AQ3V6T2 1871 aa18.12■□□□□ 0.49
CSTF3-202ENST00000431742 CHD4Q14839 1912 aa18.12■□□□□ 0.49
CSTF3-202ENST00000431742 ALDH1B1P30837 517 aa18.12■□□□□ 0.49
CSTF3-202ENST00000431742 RRP1P56182 461 aaKnown RBP18.12■□□□□ 0.49
CSTF3-202ENST00000431742 PDE3AQ14432 1141 aa18.12■□□□□ 0.49
CSTF3-202ENST00000431742 CCDC152Q4G0S7 254 aa18.12■□□□□ 0.49
CSTF3-202ENST00000431742 WWC3Q9ULE0 1092 aa18.12■□□□□ 0.49
CSTF3-202ENST00000431742 SNED1Q8TER0 1413 aa18.12■□□□□ 0.49
CSTF3-202ENST00000431742 RABL6Q3YEC7 729 aaPredicted RBP18.11■□□□□ 0.49
CSTF3-202ENST00000431742 DDX46Q7L014 1031 aaKnown RBP18.11■□□□□ 0.49
CSTF3-202ENST00000431742 BCS1LQ9Y276 419 aa18.11■□□□□ 0.49
CSTF3-202ENST00000431742 UBTFL1P0CB47 393 aaPredicted RBP18.1■□□□□ 0.49
CSTF3-202ENST00000431742 GRAPQ13588 217 aa18.1■□□□□ 0.49
CSTF3-202ENST00000431742 C20orf194Q5TEA3 1177 aa18.1■□□□□ 0.49
CSTF3-202ENST00000431742 ANKRD44Q8N8A2 993 aa18.1■□□□□ 0.49
CSTF3-202ENST00000431742 GRAPLQ8TC17 118 aaPredicted RBP18.1■□□□□ 0.49
CSTF3-202ENST00000431742 C7orf43Q8WVR3 580 aa18.1■□□□□ 0.49
CSTF3-202ENST00000431742 GREM2Q9H772 168 aa18.1■□□□□ 0.49
CSTF3-202ENST00000431742 DICER1Q9UPY3 1922 aaKnown RBP18.1■□□□□ 0.49
CSTF3-202ENST00000431742 UTRNP46939 3433 aa18.09■□□□□ 0.49
CSTF3-202ENST00000431742 GNAI3P08754 354 aa18.09■□□□□ 0.49
CSTF3-202ENST00000431742 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
CSTF3-202ENST00000431742 ITPRIPQ8IWB1 547 aa18.09■□□□□ 0.49
CSTF3-202ENST00000431742 BICC1Q9H694 974 aaKnown RBP18.09■□□□□ 0.49
CSTF3-202ENST00000431742 SEC31BQ9NQW1 1179 aa18.09■□□□□ 0.49
CSTF3-202ENST00000431742 MVPQ14764 893 aaKnown RBP18.08■□□□□ 0.48
CSTF3-202ENST00000431742 GPR162Q16538 588 aa18.08■□□□□ 0.48
CSTF3-202ENST00000431742 LMBR1LQ6UX01 489 aa18.08■□□□□ 0.48
CSTF3-202ENST00000431742 CELF1Q92879 486 aaKnown RBP18.08■□□□□ 0.48
CSTF3-202ENST00000431742 CCDC85AQ96PX6 553 aaPredicted RBP18.08■□□□□ 0.48
CSTF3-202ENST00000431742 DUOX1Q9NRD9 1551 aa18.08■□□□□ 0.48
CSTF3-202ENST00000431742 PPEF1O14829 653 aaPredicted RBP18.07■□□□□ 0.48
CSTF3-202ENST00000431742 ZBTB7BO15156 539 aaPredicted RBP18.07■□□□□ 0.48
CSTF3-202ENST00000431742 BBOX1O75936 387 aa18.07■□□□□ 0.48
CSTF3-202ENST00000431742 PELP1Q8IZL8 1130 aaKnown RBP18.07■□□□□ 0.48
CSTF3-202ENST00000431742 HDAC5Q9UQL6 1122 aa18.07■□□□□ 0.48
CSTF3-202ENST00000431742 LRRFIP2Q9Y608 721 aaKnown RBP18.07■□□□□ 0.48
CSTF3-202ENST00000431742 TMC4Q7Z404 712 aa18.06■□□□□ 0.48
CSTF3-202ENST00000431742 SLC51AQ86UW1 340 aa18.06■□□□□ 0.48
CSTF3-202ENST00000431742 COG6Q9Y2V7 657 aa18.06■□□□□ 0.48
CSTF3-202ENST00000431742 C21orf2O43822 256 aa18.05■□□□□ 0.48
CSTF3-202ENST00000431742 GRIN3BO60391 1043 aa18.05■□□□□ 0.48
CSTF3-202ENST00000431742 ITGA6P23229 1130 aa18.05■□□□□ 0.48
CSTF3-202ENST00000431742 RPS8P62241 208 aaKnown RBP18.05■□□□□ 0.48
CSTF3-202ENST00000431742 SOGA3Q5TF21 947 aa18.05■□□□□ 0.48
CSTF3-202ENST00000431742 CDC5LQ99459 802 aaKnown RBP18.05■□□□□ 0.48
CSTF3-202ENST00000431742 DDX19BQ9UMR2 479 aa18.05■□□□□ 0.48
CSTF3-202ENST00000431742 ATP6V0A2Q9Y487 856 aa18.05■□□□□ 0.48
CSTF3-202ENST00000431742 TIAM2Q8IVF5 1701 aa18.05■□□□□ 0.48
CSTF3-202ENST00000431742 GNAI2P04899 355 aa18.04■□□□□ 0.48
CSTF3-202ENST00000431742 CC2D2BQ6DHV5 1058 aa18.04■□□□□ 0.48
CSTF3-202ENST00000431742 OLFM4Q6UX06 510 aa18.04■□□□□ 0.48
CSTF3-202ENST00000431742 ANKRD18BA2A2Z9 1011 aa18.03■□□□□ 0.48
CSTF3-202ENST00000431742 IFIT5Q13325 482 aaKnown RBP18.03■□□□□ 0.48
CSTF3-202ENST00000431742 MTX1Q13505 466 aa18.03■□□□□ 0.48
CSTF3-202ENST00000431742 CCDC93Q567U6 631 aa18.03■□□□□ 0.48
CSTF3-202ENST00000431742 SP8Q8IXZ3 490 aa18.03■□□□□ 0.48
CSTF3-202ENST00000431742 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
CSTF3-202ENST00000431742 CHMP3Q9Y3E7 222 aa18.03■□□□□ 0.48
CSTF3-202ENST00000431742 LTBP3Q9NS15 1303 aa18.02■□□□□ 0.48
CSTF3-202ENST00000431742 NFKBIEO00221 500 aa18.02■□□□□ 0.48
CSTF3-202ENST00000431742 ANKRD18AQ8IVF6 992 aa18.02■□□□□ 0.48
CSTF3-202ENST00000431742 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
CSTF3-202ENST00000431742 RFX5P48382 616 aaPredicted RBP18.01■□□□□ 0.47
CSTF3-202ENST00000431742 CCDC57Q2TAC2 916 aa18.01■□□□□ 0.47
CSTF3-202ENST00000431742 GRIPAP1Q4V328 841 aa18.01■□□□□ 0.47
CSTF3-202ENST00000431742 ZBTB40Q9NUA8 1239 aa18.01■□□□□ 0.47
CSTF3-202ENST00000431742 BSDC1Q9NW68 430 aaPredicted RBP18.01■□□□□ 0.47
CSTF3-202ENST00000431742 RTKN2Q8IZC4 609 aa18■□□□□ 0.47
CSTF3-202ENST00000431742 SUPT16HQ9Y5B9 1047 aaKnown RBP18■□□□□ 0.47
CSTF3-202ENST00000431742 IGHMBP2P38935 993 aaKnown RBP17.99■□□□□ 0.47
CSTF3-202ENST00000431742 ARHGAP27Q6ZUM4 889 aa17.99■□□□□ 0.47
CSTF3-202ENST00000431742 ZNF594Q96JF6 807 aaPredicted RBP17.99■□□□□ 0.47
CSTF3-202ENST00000431742 CHMP4BQ9H444 224 aaKnown RBP17.99■□□□□ 0.47
CSTF3-202ENST00000431742 C1orf115Q9H7X2 142 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms