RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 XYLBO75191 536 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 IRS1P35568 1242 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 EFHC2Q5JST6 749 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 FIGNL1Q6PIW4 674 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 PI16Q6UXB8 463 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 C1orf127Q8N9H9 656 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 GLIS3Q8NEA6 775 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 CRELD1Q96HD1 420 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 BCL11AQ9H165 835 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 C12orf49Q9H741 205 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 STRN4Q9NRL3 753 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 PCDHGC4Q9Y5F7 938 aa5.17□□□□□ -1.58
HMGB1P27-201ENST00000431429 SOBPA7XYQ1 873 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 EREGO14944 169 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 ATXN7O15265 892 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 PHACTR2O75167 634 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 PTPN12Q05209 780 aaKnown RBP5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 SFSWAPQ12872 951 aaKnown RBP5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 DBN1Q16643 649 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 TRIM22Q8IYM9 498 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 PGBD3Q8N328 593 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 OR13H1Q8NG92 308 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 EPS8L3Q8TE67 593 aaKnown RBP5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 ANKRD24Q8TF21 1146 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 GMCL1Q96IK5 515 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 EFCC1Q9HA90 598 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 NEUROD4Q9HD90 331 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 ABI2Q9NYB9 513 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 SALL4Q9UJQ4 1053 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 KCNH4Q9UQ05 1017 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 SPG7Q9UQ90 795 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 USP31Q70CQ4 1352 aa5.16□□□□□ -1.58
HMGB1P27-201ENST00000431429 BNIP3LO60238 219 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 MAN1A2O60476 641 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 KIF4AO95239 1232 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 MAPTP10636 758 aaKnown RBP5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 SOX18P35713 384 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 FAM182BQ5T319 152 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 KIAA0319Q5VV43 1072 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 PEAR1Q5VY43 1037 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 CCDC155Q8N6L0 562 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 TMEM87AQ8NBN3 555 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 TTC16Q8NEE8 873 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 PMEPA1Q969W9 287 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 TRIM47Q96LD4 638 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 GAS2L1Q99501 681 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 SRCIN1Q9C0H9 1055 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 NUCKS1Q9H1E3 243 aaKnown RBP5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 MRS2Q9HD23 443 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 NPHS2Q9NP85 383 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 ZFATQ9P243 1243 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 VTI1BQ9UEU0 232 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 GJA3Q9Y6H8 435 aa5.15□□□□□ -1.59
HMGB1P27-201ENST00000431429 MAP3K6O95382 1288 aa5.14□□□□□ -1.59
HMGB1P27-201ENST00000431429 EIF4BP23588 611 aaKnown RBP5.14□□□□□ -1.59
HMGB1P27-201ENST00000431429 ST13P50502 369 aaKnown RBP5.14□□□□□ -1.59
HMGB1P27-201ENST00000431429 ZC3H6P61129 1189 aaKnown RBP5.14□□□□□ -1.59
HMGB1P27-201ENST00000431429 CCINQ13939 588 aa5.14□□□□□ -1.59
HMGB1P27-201ENST00000431429 GRIN2CQ14957 1233 aa5.14□□□□□ -1.59
HMGB1P27-201ENST00000431429 PRPF40BQ6NWY9 871 aaKnown RBP5.14□□□□□ -1.59
HMGB1P27-201ENST00000431429 C3orf58Q8NDZ4 430 aa5.14□□□□□ -1.59
HMGB1P27-201ENST00000431429 KIFC2Q96AC6 838 aa5.14□□□□□ -1.59
HMGB1P27-201ENST00000431429 ZNF837Q96EG3 531 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P27-201ENST00000431429 SUV39H2Q9H5I1 410 aa5.14□□□□□ -1.59
HMGB1P27-201ENST00000431429 H7C1W4 665 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 LCE2BO14633 110 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 MMP20O60882 483 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 CYP2E1P05181 493 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 ITGA6P23229 1130 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 TARSP26639 723 aaKnown RBP5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 GRM2Q14416 872 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 NT5DC4Q86YG4 428 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 RNF34Q969K3 372 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 CNTNAP3BQ96NU0 1288 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 TINF2Q9BSI4 451 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 CNTNAP3Q9BZ76 1288 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 TGIF2Q9GZN2 237 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 SENP2Q9HC62 589 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 FAM8A1Q9UBU6 413 aa5.13□□□□□ -1.59
HMGB1P27-201ENST00000431429 A0A1W2PP55 124 aa5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 DCDC2BA2VCK2 349 aa5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 SASH3O75995 380 aa5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 POLR3DP05423 398 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 ERCC5P28715 1186 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 ZNF76P36508 570 aa5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 MAP3K10Q02779 954 aa5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 COL13A1Q5TAT6 717 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 SLC30A3Q99726 388 aa5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 BCO2Q9BYV7 579 aa5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 TLR7Q9NYK1 1049 aaKnown RBP5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 MARK1Q9P0L2 795 aa5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 ATXN7L1Q9ULK2 861 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P27-201ENST00000431429 NFKBIEO00221 500 aa5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 KHNYNO15037 678 aaKnown RBP5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 USP17L7P0C7H9 530 aa5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 CES1P23141 567 aa5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 SPEM2Q0P670 501 aa5.11□□□□□ -1.59
HMGB1P27-201ENST00000431429 NAALADL2Q58DX5 795 aa5.11□□□□□ -1.59
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