RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 HSPA6P17066 643 aa22.59■■□□□ 1.21
HMGN1-206ENST00000431390 RTL5Q5HYW3 569 aaPredicted RBP22.59■■□□□ 1.21
HMGN1-206ENST00000431390 SUSD4Q5VX71 490 aa22.59■■□□□ 1.21
HMGN1-206ENST00000431390 UTP14AQ9BVJ6 771 aaKnown RBP22.59■■□□□ 1.21
HMGN1-206ENST00000431390 ZBTB47Q9UFB7 747 aaPredicted RBP22.59■■□□□ 1.21
HMGN1-206ENST00000431390 SRP68Q9UHB9 627 aaKnown RBP22.59■■□□□ 1.21
HMGN1-206ENST00000431390 EXOC6BQ9Y2D4 811 aa22.59■■□□□ 1.21
HMGN1-206ENST00000431390 RAB11FIP3O75154 756 aa22.59■■□□□ 1.21
HMGN1-206ENST00000431390 RGS3P49796 1198 aa22.59■■□□□ 1.21
HMGN1-206ENST00000431390 LNPKQ9C0E8 428 aa22.59■■□□□ 1.21
HMGN1-206ENST00000431390 SH3TC1Q8TE82 1336 aa22.58■■□□□ 1.21
HMGN1-206ENST00000431390 SURF6O75683 361 aaKnown RBP22.58■■□□□ 1.2
HMGN1-206ENST00000431390 LMBR1LQ6UX01 489 aa22.58■■□□□ 1.2
HMGN1-206ENST00000431390 NTSR2O95665 410 aa22.57■■□□□ 1.2
HMGN1-206ENST00000431390 IRS4O14654 1257 aaPredicted RBP22.56■■□□□ 1.2
HMGN1-206ENST00000431390 HSP90B1P14625 803 aaKnown RBP22.56■■□□□ 1.2
HMGN1-206ENST00000431390 PDE4AP27815 886 aa22.56■■□□□ 1.2
HMGN1-206ENST00000431390 TBC1D9BQ66K14 1250 aa22.56■■□□□ 1.2
HMGN1-206ENST00000431390 LRRCC1Q9C099 1032 aa22.56■■□□□ 1.2
HMGN1-206ENST00000431390 DDX60Q8IY21 1712 aaKnown RBP22.56■■□□□ 1.2
HMGN1-206ENST00000431390 MMP10P09238 476 aa22.55■■□□□ 1.2
HMGN1-206ENST00000431390 RFX5P48382 616 aaPredicted RBP22.55■■□□□ 1.2
HMGN1-206ENST00000431390 COPRSQ9NQ92 184 aa22.55■■□□□ 1.2
HMGN1-206ENST00000431390 PDE8AO60658 829 aa22.55■■□□□ 1.2
HMGN1-206ENST00000431390 CSF1RP07333 972 aa22.55■■□□□ 1.2
HMGN1-206ENST00000431390 SETDB2Q96T68 719 aa22.55■■□□□ 1.2
HMGN1-206ENST00000431390 BRCA1P38398 1863 aaKnown RBP22.54■■□□□ 1.2
HMGN1-206ENST00000431390 KIF3CO14782 793 aa22.54■■□□□ 1.2
HMGN1-206ENST00000431390 ERC1Q8IUD2 1116 aa22.54■■□□□ 1.2
HMGN1-206ENST00000431390 SYNE4Q8N205 404 aa22.54■■□□□ 1.2
HMGN1-206ENST00000431390 KIF1BPQ96EK5 621 aa22.54■■□□□ 1.2
HMGN1-206ENST00000431390 NYXQ9GZU5 481 aa22.53■■□□□ 1.2
HMGN1-206ENST00000431390 APBB1O00213 710 aa22.52■■□□□ 1.2
HMGN1-206ENST00000431390 CTSWP56202 376 aa22.52■■□□□ 1.2
HMGN1-206ENST00000431390 PTPN12Q05209 780 aaKnown RBP22.52■■□□□ 1.2
HMGN1-206ENST00000431390 PA2G4Q9UQ80 394 aaKnown RBP22.52■■□□□ 1.2
HMGN1-206ENST00000431390 CHMP3Q9Y3E7 222 aa22.52■■□□□ 1.2
HMGN1-206ENST00000431390 GYS1P13807 737 aa22.51■■□□□ 1.19
HMGN1-206ENST00000431390 G3BP1Q13283 466 aaKnown RBP eCLIP22.51■■□□□ 1.19
HMGN1-206ENST00000431390 BICDL1Q6ZP65 573 aa22.51■■□□□ 1.19
HMGN1-206ENST00000431390 RHPN1Q8TCX5 695 aa22.51■■□□□ 1.19
HMGN1-206ENST00000431390 FAM177BA6PVY3 158 aa22.5■■□□□ 1.19
HMGN1-206ENST00000431390 SMARCA5O60264 1052 aaPredicted RBP22.5■■□□□ 1.19
HMGN1-206ENST00000431390 OS9Q13438 667 aaPredicted RBP22.5■■□□□ 1.19
HMGN1-206ENST00000431390 TTLL11Q8NHH1 800 aa22.5■■□□□ 1.19
HMGN1-206ENST00000431390 C10orf71Q711Q0 1435 aa22.5■■□□□ 1.19
HMGN1-206ENST00000431390 CARMIL3Q8ND23 1372 aa22.5■■□□□ 1.19
HMGN1-206ENST00000431390 CCDC57Q2TAC2 916 aa22.49■■□□□ 1.19
HMGN1-206ENST00000431390 BCS1LQ9Y276 419 aa22.49■■□□□ 1.19
HMGN1-206ENST00000431390 A0A0G2JLW4 131 aa22.48■■□□□ 1.19
HMGN1-206ENST00000431390 TPTE2Q6XPS3 522 aa22.48■■□□□ 1.19
HMGN1-206ENST00000431390 NBPF5PQ86XG9 351 aaPredicted RBP22.48■■□□□ 1.19
HMGN1-206ENST00000431390 KLHDC4Q8TBB5 520 aa22.48■■□□□ 1.19
HMGN1-206ENST00000431390 FBXO3Q9UK99 471 aa22.48■■□□□ 1.19
HMGN1-206ENST00000431390 IFIT5Q13325 482 aaKnown RBP22.47■■□□□ 1.19
HMGN1-206ENST00000431390 NFIXQ14938 502 aa22.47■■□□□ 1.19
HMGN1-206ENST00000431390 FAM161AQ3B820 660 aa22.47■■□□□ 1.19
HMGN1-206ENST00000431390 SLC10A5Q5PT55 438 aa22.47■■□□□ 1.19
HMGN1-206ENST00000431390 NUTM1Q86Y26 1132 aa22.47■■□□□ 1.19
HMGN1-206ENST00000431390 ARFGEF1Q9Y6D6 1849 aa22.47■■□□□ 1.19
HMGN1-206ENST00000431390 HCLS1P14317 486 aaPredicted RBP22.46■■□□□ 1.19
HMGN1-206ENST00000431390 TGFB2P61812 414 aa22.46■■□□□ 1.19
HMGN1-206ENST00000431390 ERFEQ4G0M1 354 aa22.46■■□□□ 1.19
HMGN1-206ENST00000431390 NLGN1Q8N2Q7 840 aa22.46■■□□□ 1.19
HMGN1-206ENST00000431390 SIL1Q9H173 461 aa22.46■■□□□ 1.19
HMGN1-206ENST00000431390 RTL9Q8NET4 1388 aa22.46■■□□□ 1.19
HMGN1-206ENST00000431390 GTF2E1P29083 439 aaPredicted RBP22.46■■□□□ 1.19
HMGN1-206ENST00000431390 PLEKHM2Q8IWE5 1019 aa22.46■■□□□ 1.19
HMGN1-206ENST00000431390 ANKRD18BA2A2Z9 1011 aa22.45■■□□□ 1.18
HMGN1-206ENST00000431390 CIAO1O76071 339 aa22.45■■□□□ 1.18
HMGN1-206ENST00000431390 SASH1O94885 1247 aa22.45■■□□□ 1.18
HMGN1-206ENST00000431390 TM4SF1P30408 202 aa22.45■■□□□ 1.18
HMGN1-206ENST00000431390 C16orf71Q8IYS4 520 aaPredicted RBP22.45■■□□□ 1.18
HMGN1-206ENST00000431390 GREM2Q9H772 168 aa22.45■■□□□ 1.18
HMGN1-206ENST00000431390 SALL3Q9BXA9 1300 aa22.44■■□□□ 1.18
HMGN1-206ENST00000431390 ITGA6P23229 1130 aa22.44■■□□□ 1.18
HMGN1-206ENST00000431390 CCDC152Q4G0S7 254 aa22.44■■□□□ 1.18
HMGN1-206ENST00000431390 CLASRPQ8N2M8 674 aaKnown RBP22.44■■□□□ 1.18
HMGN1-206ENST00000431390 IL1RAPL2Q9NP60 686 aa22.44■■□□□ 1.18
HMGN1-206ENST00000431390 EYA2O00167 538 aa22.43■■□□□ 1.18
HMGN1-206ENST00000431390 DPEP1P16444 411 aa22.43■■□□□ 1.18
HMGN1-206ENST00000431390 RIC1Q4ADV7 1423 aa22.43■■□□□ 1.18
HMGN1-206ENST00000431390 ARHGAP27Q6ZUM4 889 aa22.43■■□□□ 1.18
HMGN1-206ENST00000431390 OSBPL3Q9H4L5 887 aa22.43■■□□□ 1.18
HMGN1-206ENST00000431390 ABCC12Q96J65 1359 aa22.43■■□□□ 1.18
HMGN1-206ENST00000431390 IL15P40933 162 aaPredicted RBP22.42■■□□□ 1.18
HMGN1-206ENST00000431390 SF3B3Q15393 1217 aaKnown RBP22.42■■□□□ 1.18
HMGN1-206ENST00000431390 TAF7LQ5H9L4 462 aa22.42■■□□□ 1.18
HMGN1-206ENST00000431390 CCDC85AQ96PX6 553 aaPredicted RBP22.42■■□□□ 1.18
HMGN1-206ENST00000431390 ATG9AQ7Z3C6 839 aa22.42■■□□□ 1.18
HMGN1-206ENST00000431390 OTUD7AQ8TE49 926 aaPredicted RBP22.42■■□□□ 1.18
HMGN1-206ENST00000431390 ZNF594Q96JF6 807 aaPredicted RBP22.42■■□□□ 1.18
HMGN1-206ENST00000431390 CNBD1Q8NA66 436 aa22.41■■□□□ 1.18
HMGN1-206ENST00000431390 PARP3Q9Y6F1 533 aa22.41■■□□□ 1.18
HMGN1-206ENST00000431390 TOMM70O94826 608 aa22.4■■□□□ 1.18
HMGN1-206ENST00000431390 MX1P20591 662 aa22.4■■□□□ 1.18
HMGN1-206ENST00000431390 PDE1AP54750 535 aa22.4■■□□□ 1.18
HMGN1-206ENST00000431390 BMP2KLQ5H9B9 411 aa22.4■■□□□ 1.18
HMGN1-206ENST00000431390 BCL11AQ9H165 835 aa22.4■■□□□ 1.18
HMGN1-206ENST00000431390 NMRK2Q9NPI5 230 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms