RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 IQCA1LA6NCM1 817 aa22.54■■□□□ 1.2
NUP50-208ENST00000430547 TMC4Q7Z404 712 aa22.54■■□□□ 1.2
NUP50-208ENST00000430547 SP8Q8IXZ3 490 aa22.54■■□□□ 1.2
NUP50-208ENST00000430547 PI4KAP1Q8N8J0 262 aa22.54■■□□□ 1.2
NUP50-208ENST00000430547 MYH3P11055 1940 aa22.54■■□□□ 1.2
NUP50-208ENST00000430547 LRRC37AA6NMS7 1700 aa22.54■■□□□ 1.2
NUP50-208ENST00000430547 POTECB2RU33 542 aa22.53■■□□□ 1.2
NUP50-208ENST00000430547 EIF6P56537 245 aaKnown RBP22.53■■□□□ 1.2
NUP50-208ENST00000430547 SF3B3Q15393 1217 aaKnown RBP22.53■■□□□ 1.2
NUP50-208ENST00000430547 DPP8Q6V1X1 898 aaPredicted RBP22.53■■□□□ 1.2
NUP50-208ENST00000430547 SLC51AQ86UW1 340 aa22.53■■□□□ 1.2
NUP50-208ENST00000430547 FZD9O00144 591 aa22.52■■□□□ 1.2
NUP50-208ENST00000430547 PPIP5K2O43314 1243 aa22.52■■□□□ 1.2
NUP50-208ENST00000430547 PCCAP05165 728 aaPredicted RBP22.52■■□□□ 1.2
NUP50-208ENST00000430547 EXOSC9Q06265 439 aaKnown RBP22.52■■□□□ 1.2
NUP50-208ENST00000430547 NIM1KQ8IY84 436 aa22.52■■□□□ 1.2
NUP50-208ENST00000430547 MPNDQ8N594 471 aa22.52■■□□□ 1.2
NUP50-208ENST00000430547 L3MBTL3Q96JM7 780 aaPredicted RBP22.51■■□□□ 1.19
NUP50-208ENST00000430547 VPS33BQ9H267 617 aa22.51■■□□□ 1.19
NUP50-208ENST00000430547 COL4A5P29400 1685 aa22.5■■□□□ 1.19
NUP50-208ENST00000430547 FLIIQ13045 1269 aa22.5■■□□□ 1.19
NUP50-208ENST00000430547 G2E3Q7L622 706 aa22.5■■□□□ 1.19
NUP50-208ENST00000430547 PDE8AO60658 829 aa22.49■■□□□ 1.19
NUP50-208ENST00000430547 VAMP4O75379 141 aa22.49■■□□□ 1.19
NUP50-208ENST00000430547 FKBP5Q13451 457 aaPredicted RBP22.49■■□□□ 1.19
NUP50-208ENST00000430547 AOC3Q16853 763 aa22.49■■□□□ 1.19
NUP50-208ENST00000430547 GPC2Q8N158 579 aa22.49■■□□□ 1.19
NUP50-208ENST00000430547 CCDC152Q4G0S7 254 aa22.48■■□□□ 1.19
NUP50-208ENST00000430547 CELF1Q92879 486 aaKnown RBP22.48■■□□□ 1.19
NUP50-208ENST00000430547 RTFDC1Q9BY42 306 aaPredicted RBP22.48■■□□□ 1.19
NUP50-208ENST00000430547 SPINK5Q9NQ38 1064 aaPredicted RBP22.48■■□□□ 1.19
NUP50-208ENST00000430547 HACL1Q9UJ83 578 aa22.48■■□□□ 1.19
NUP50-208ENST00000430547 GJA3Q9Y6H8 435 aa22.48■■□□□ 1.19
NUP50-208ENST00000430547 JARID2Q92833 1246 aaPredicted RBP22.47■■□□□ 1.19
NUP50-208ENST00000430547 CDHR2Q9BYE9 1310 aa22.47■■□□□ 1.19
NUP50-208ENST00000430547 IGKV5-2P06315 115 aa22.46■■□□□ 1.19
NUP50-208ENST00000430547 CWF19L2Q2TBE0 894 aaKnown RBP22.46■■□□□ 1.19
NUP50-208ENST00000430547 TAF1DQ9H5J8 278 aaPredicted RBP22.46■■□□□ 1.19
NUP50-208ENST00000430547 NEURL1BA8MQ27 555 aa22.45■■□□□ 1.18
NUP50-208ENST00000430547 LMOD1P29536 600 aaPredicted RBP22.45■■□□□ 1.18
NUP50-208ENST00000430547 RPS8P62241 208 aaKnown RBP22.45■■□□□ 1.18
NUP50-208ENST00000430547 CHADLQ6NUI6 762 aa22.45■■□□□ 1.18
NUP50-208ENST00000430547 NSFL1CQ9UNZ2 370 aaKnown RBP22.45■■□□□ 1.18
NUP50-208ENST00000430547 SPEF2Q9C093 1822 aa22.45■■□□□ 1.18
NUP50-208ENST00000430547 COL4A1P02462 1669 aa22.44■■□□□ 1.18
NUP50-208ENST00000430547 EAPPQ56P03 285 aaPredicted RBP22.44■■□□□ 1.18
NUP50-208ENST00000430547 DNAAF4Q8WXU2 420 aa22.44■■□□□ 1.18
NUP50-208ENST00000430547 DUOX1Q9NRD9 1551 aa22.44■■□□□ 1.18
NUP50-208ENST00000430547 EPHX2P34913 555 aa22.43■■□□□ 1.18
NUP50-208ENST00000430547 KIAA2012Q0VF49 1180 aa22.43■■□□□ 1.18
NUP50-208ENST00000430547 LDHDQ86WU2 507 aa22.43■■□□□ 1.18
NUP50-208ENST00000430547 CCDC85AQ96PX6 553 aaPredicted RBP22.43■■□□□ 1.18
NUP50-208ENST00000430547 SEC31BQ9NQW1 1179 aa22.43■■□□□ 1.18
NUP50-208ENST00000430547 ZNRF3Q9ULT6 936 aa22.43■■□□□ 1.18
NUP50-208ENST00000430547 ZNF521Q96K83 1311 aa22.42■■□□□ 1.18
NUP50-208ENST00000430547 CTSWP56202 376 aa22.42■■□□□ 1.18
NUP50-208ENST00000430547 UBE3BQ7Z3V4 1068 aa22.42■■□□□ 1.18
NUP50-208ENST00000430547 PNMA8AQ86V59 439 aaPredicted RBP22.42■■□□□ 1.18
NUP50-208ENST00000430547 LTBP1Q14766 1721 aa22.41■■□□□ 1.18
NUP50-208ENST00000430547 C6orf229H3BNL8 230 aa22.41■■□□□ 1.18
NUP50-208ENST00000430547 POTEIP0CG38 1075 aa22.41■■□□□ 1.18
NUP50-208ENST00000430547 POTEJP0CG39 1038 aa22.41■■□□□ 1.18
NUP50-208ENST00000430547 CLEC11AQ9Y240 323 aa22.41■■□□□ 1.18
NUP50-208ENST00000430547 CCER2I3L3R5 266 aa22.4■■□□□ 1.18
NUP50-208ENST00000430547 GPSM2P81274 684 aa22.4■■□□□ 1.18
NUP50-208ENST00000430547 GCKRQ14397 625 aa22.4■■□□□ 1.18
NUP50-208ENST00000430547 WASHC4Q2M389 1173 aa22.4■■□□□ 1.18
NUP50-208ENST00000430547 ANKRD18AQ8IVF6 992 aa22.4■■□□□ 1.18
NUP50-208ENST00000430547 LINS1Q8NG48 757 aa22.4■■□□□ 1.18
NUP50-208ENST00000430547 CDC5LQ99459 802 aaKnown RBP22.4■■□□□ 1.18
NUP50-208ENST00000430547 EYA3Q99504 573 aa22.4■■□□□ 1.18
NUP50-208ENST00000430547 HTRA3P83110 453 aa22.39■■□□□ 1.17
NUP50-208ENST00000430547 ANKIB1Q9P2G1 1089 aa22.39■■□□□ 1.17
NUP50-208ENST00000430547 ADAMTSL1Q8N6G6 1762 aa22.39■■□□□ 1.17
NUP50-208ENST00000430547 E9PSI1 815 aa22.38■■□□□ 1.17
NUP50-208ENST00000430547 CXCL9Q07325 125 aa22.38■■□□□ 1.17
NUP50-208ENST00000430547 CIAPIN1Q6FI81 312 aa22.38■■□□□ 1.17
NUP50-208ENST00000430547 H7C1W4 665 aa22.37■■□□□ 1.17
NUP50-208ENST00000430547 RIMBP2O15034 1052 aa22.37■■□□□ 1.17
NUP50-208ENST00000430547 TNIP1Q15025 636 aa22.37■■□□□ 1.17
NUP50-208ENST00000430547 TTLL11Q8NHH1 800 aa22.37■■□□□ 1.17
NUP50-208ENST00000430547 SCNN1DP51172 638 aa22.36■■□□□ 1.17
NUP50-208ENST00000430547 POLLQ9UGP5 575 aa22.36■■□□□ 1.17
NUP50-208ENST00000430547 F6X3S4 739 aa22.35■■□□□ 1.17
NUP50-208ENST00000430547 G3V3G9 751 aa22.35■■□□□ 1.17
NUP50-208ENST00000430547 RAD17O75943 681 aa22.35■■□□□ 1.17
NUP50-208ENST00000430547 UFL1O94874 794 aa22.35■■□□□ 1.17
NUP50-208ENST00000430547 DCAF8Q5TAQ9 597 aa22.35■■□□□ 1.17
NUP50-208ENST00000430547 DNAJC5GQ8N7S2 189 aa22.35■■□□□ 1.17
NUP50-208ENST00000430547 TBC1D16Q8TBP0 767 aa22.35■■□□□ 1.17
NUP50-208ENST00000430547 BCL2L13Q9BXK5 485 aa22.35■■□□□ 1.17
NUP50-208ENST00000430547 GREM2Q9H772 168 aa22.35■■□□□ 1.17
NUP50-208ENST00000430547 PODXL2Q9NZ53 605 aa22.35■■□□□ 1.17
NUP50-208ENST00000430547 GGA1Q9UJY5 639 aa22.35■■□□□ 1.17
NUP50-208ENST00000430547 RTL9Q8NET4 1388 aa22.35■■□□□ 1.17
NUP50-208ENST00000430547 EPS15P42566 896 aa22.34■■□□□ 1.17
NUP50-208ENST00000430547 KLRG1Q96E93 195 aa22.34■■□□□ 1.17
NUP50-208ENST00000430547 ZC3H12CQ9C0D7 883 aaKnown RBP22.34■■□□□ 1.17
NUP50-208ENST00000430547 DBNDD1Q9H9R9 158 aa22.34■■□□□ 1.17
NUP50-208ENST00000430547 XDHP47989 1333 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms