RNA–Protein interactions for RNA: ENST00000430407.1

RCC1-209, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-209ENST00000430407 DEFB115Q30KQ5 88 aa22.75■■□□□ 1.23
RCC1-209ENST00000430407 ABT1Q9ULW3 272 aaKnown RBP22.75■■□□□ 1.23
RCC1-209ENST00000430407 BBOX1O75936 387 aa22.74■■□□□ 1.23
RCC1-209ENST00000430407 AOC3Q16853 763 aa22.74■■□□□ 1.23
RCC1-209ENST00000430407 TRMT112Q9UI30 125 aaKnown RBP22.74■■□□□ 1.23
RCC1-209ENST00000430407 EPS15P42566 896 aa22.73■■□□□ 1.23
RCC1-209ENST00000430407 DPP8Q6V1X1 898 aaPredicted RBP22.73■■□□□ 1.23
RCC1-209ENST00000430407 USP50Q70EL3 339 aaPredicted RBP22.73■■□□□ 1.23
RCC1-209ENST00000430407 DDX46Q7L014 1031 aaKnown RBP22.73■■□□□ 1.23
RCC1-209ENST00000430407 NLRP10Q86W26 655 aa22.73■■□□□ 1.23
RCC1-209ENST00000430407 TSPYL6Q8N831 410 aa22.73■■□□□ 1.23
RCC1-209ENST00000430407 ABCC4O15439 1325 aa22.73■■□□□ 1.23
RCC1-209ENST00000430407 FOXN1O15353 648 aa22.72■■□□□ 1.23
RCC1-209ENST00000430407 CTCFP49711 727 aaPredicted RBP22.72■■□□□ 1.23
RCC1-209ENST00000430407 SCNN1DP51172 638 aa22.72■■□□□ 1.23
RCC1-209ENST00000430407 RASSF10A6NK89 507 aa22.71■■□□□ 1.23
RCC1-209ENST00000430407 HCLS1P14317 486 aaPredicted RBP22.71■■□□□ 1.23
RCC1-209ENST00000430407 GOLGA2Q08379 1002 aa22.71■■□□□ 1.23
RCC1-209ENST00000430407 SP8Q8IXZ3 490 aa22.71■■□□□ 1.23
RCC1-209ENST00000430407 MPNDQ8N594 471 aa22.71■■□□□ 1.23
RCC1-209ENST00000430407 ZNRF3Q9ULT6 936 aa22.71■■□□□ 1.23
RCC1-209ENST00000430407 SH3TC1Q8TE82 1336 aa22.71■■□□□ 1.23
RCC1-209ENST00000430407 TWISTNBQ3B726 338 aaPredicted RBP22.7■■□□□ 1.22
RCC1-209ENST00000430407 RIC3Q7Z5B4 369 aa22.7■■□□□ 1.22
RCC1-209ENST00000430407 PHAXQ9H814 394 aaKnown RBP22.7■■□□□ 1.22
RCC1-209ENST00000430407 PAXIP1Q6ZW49 1069 aaPredicted RBP22.69■■□□□ 1.22
RCC1-209ENST00000430407 ISCA1Q9BUE6 129 aa22.69■■□□□ 1.22
RCC1-209ENST00000430407 PRDM10Q9NQV6 1147 aa22.69■■□□□ 1.22
RCC1-209ENST00000430407 ADAMTSL1Q8N6G6 1762 aa22.68■■□□□ 1.22
RCC1-209ENST00000430407 COL4A5P29400 1685 aa22.68■■□□□ 1.22
RCC1-209ENST00000430407 FANCIQ9NVI1 1328 aa22.68■■□□□ 1.22
RCC1-209ENST00000430407 DDX58O95786 925 aaKnown RBP22.68■■□□□ 1.22
RCC1-209ENST00000430407 MAP2K1Q02750 393 aaPredicted RBP22.68■■□□□ 1.22
RCC1-209ENST00000430407 GRAPQ13588 217 aa22.68■■□□□ 1.22
RCC1-209ENST00000430407 SLC51AQ86UW1 340 aa22.68■■□□□ 1.22
RCC1-209ENST00000430407 GRAPLQ8TC17 118 aaPredicted RBP22.68■■□□□ 1.22
RCC1-209ENST00000430407 STK31Q9BXU1 1019 aa22.68■■□□□ 1.22
RCC1-209ENST00000430407 RTFDC1Q9BY42 306 aaPredicted RBP22.68■■□□□ 1.22
RCC1-209ENST00000430407 ADARB2Q9NS39 739 aaKnown RBP22.68■■□□□ 1.22
RCC1-209ENST00000430407 WDR33Q9C0J8 1336 aaKnown RBP22.67■■□□□ 1.22
RCC1-209ENST00000430407 TRIM28Q13263 835 aaKnown RBP22.67■■□□□ 1.22
RCC1-209ENST00000430407 TMC4Q7Z404 712 aa22.67■■□□□ 1.22
RCC1-209ENST00000430407 BCL2L13Q9BXK5 485 aa22.67■■□□□ 1.22
RCC1-209ENST00000430407 WBP1LQ9NX94 342 aa22.67■■□□□ 1.22
RCC1-209ENST00000430407 GPRC5DQ9NZD1 345 aa22.67■■□□□ 1.22
RCC1-209ENST00000430407 CXCL9Q07325 125 aa22.66■■□□□ 1.22
RCC1-209ENST00000430407 TNIP1Q15025 636 aa22.66■■□□□ 1.22
RCC1-209ENST00000430407 CIAPIN1Q6FI81 312 aa22.66■■□□□ 1.22
RCC1-209ENST00000430407 ANKRD36CQ5JPF3 1778 aa22.66■■□□□ 1.22
RCC1-209ENST00000430407 ATP5J2-PTCD1G3V325 749 aa22.65■■□□□ 1.22
RCC1-209ENST00000430407 CCER2I3L3R5 266 aa22.65■■□□□ 1.22
RCC1-209ENST00000430407 ECE1P42892 770 aa22.65■■□□□ 1.22
RCC1-209ENST00000430407 KIAA2012Q0VF49 1180 aa22.65■■□□□ 1.22
RCC1-209ENST00000430407 MYH16Q9H6N6 1097 aa22.65■■□□□ 1.22
RCC1-209ENST00000430407 BEGAINQ9BUH8 593 aa22.64■■□□□ 1.21
RCC1-209ENST00000430407 GMPSP49915 693 aaPredicted RBP22.63■■□□□ 1.21
RCC1-209ENST00000430407 LBX1P52954 281 aa22.63■■□□□ 1.21
RCC1-209ENST00000430407 GRM1Q13255 1194 aa22.63■■□□□ 1.21
RCC1-209ENST00000430407 CDHR2Q9BYE9 1310 aa22.62■■□□□ 1.21
RCC1-209ENST00000430407 EXOSC9Q06265 439 aaKnown RBP22.62■■□□□ 1.21
RCC1-209ENST00000430407 ZNF428Q96B54 188 aa22.62■■□□□ 1.21
RCC1-209ENST00000430407 TRAF5O00463 557 aa22.61■■□□□ 1.21
RCC1-209ENST00000430407 VAMP4O75379 141 aa22.61■■□□□ 1.21
RCC1-209ENST00000430407 RAD17O75943 681 aa22.61■■□□□ 1.21
RCC1-209ENST00000430407 SLC4A2P04920 1241 aa22.61■■□□□ 1.21
RCC1-209ENST00000430407 FMR1Q06787 632 aaKnown RBP eCLIP22.61■■□□□ 1.21
RCC1-209ENST00000430407 CAPNS2Q96L46 248 aa22.61■■□□□ 1.21
RCC1-209ENST00000430407 MYD88Q99836 296 aa22.61■■□□□ 1.21
RCC1-209ENST00000430407 METTL22Q9BUU2 404 aaPredicted RBP22.61■■□□□ 1.21
RCC1-209ENST00000430407 SPINK5Q9NQ38 1064 aaPredicted RBP22.61■■□□□ 1.21
RCC1-209ENST00000430407 LTBP1Q14766 1721 aa22.6■■□□□ 1.21
RCC1-209ENST00000430407 KSR2Q6VAB6 950 aa22.6■■□□□ 1.21
RCC1-209ENST00000430407 CCDC191Q8NCU4 936 aa22.6■■□□□ 1.21
RCC1-209ENST00000430407 FAM89AQ96GI7 184 aa22.6■■□□□ 1.21
RCC1-209ENST00000430407 ZNF521Q96K83 1311 aa22.59■■□□□ 1.21
RCC1-209ENST00000430407 H7C1D1 291 aa22.59■■□□□ 1.21
RCC1-209ENST00000430407 WASHC4Q2M389 1173 aa22.59■■□□□ 1.21
RCC1-209ENST00000430407 CST9Q5W186 159 aa22.59■■□□□ 1.21
RCC1-209ENST00000430407 GPR101Q96P66 508 aaPredicted RBP22.59■■□□□ 1.21
RCC1-209ENST00000430407 NSFL1CQ9UNZ2 370 aaKnown RBP22.59■■□□□ 1.21
RCC1-209ENST00000430407 MAP3K2Q9Y2U5 619 aa22.59■■□□□ 1.21
RCC1-209ENST00000430407 TLL2Q9Y6L7 1015 aa22.59■■□□□ 1.21
RCC1-209ENST00000430407 PI4KAP2A4QPH2 592 aa22.58■■□□□ 1.21
RCC1-209ENST00000430407 HSP90B1P14625 803 aaKnown RBP22.58■■□□□ 1.21
RCC1-209ENST00000430407 CYP4F22Q6NT55 531 aa22.58■■□□□ 1.21
RCC1-209ENST00000430407 PI4KAP1Q8N8J0 262 aa22.58■■□□□ 1.21
RCC1-209ENST00000430407 ZBTB38Q8NAP3 1195 aaPredicted RBP22.58■■□□□ 1.21
RCC1-209ENST00000430407 ZC3H15Q8WU90 426 aaKnown RBP22.58■■□□□ 1.21
RCC1-209ENST00000430407 IRS4O14654 1257 aaPredicted RBP22.57■■□□□ 1.2
RCC1-209ENST00000430407 CELF2O95319 508 aaKnown RBP22.57■■□□□ 1.2
RCC1-209ENST00000430407 SF3B3Q15393 1217 aaKnown RBP22.57■■□□□ 1.2
RCC1-209ENST00000430407 RTL5Q5HYW3 569 aaPredicted RBP22.57■■□□□ 1.2
RCC1-209ENST00000430407 G2E3Q7L622 706 aa22.57■■□□□ 1.2
RCC1-209ENST00000430407 CWC25Q9NXE8 425 aaPredicted RBP22.57■■□□□ 1.2
RCC1-209ENST00000430407 CNOT7Q9UIV1 285 aaKnown RBP22.57■■□□□ 1.2
RCC1-209ENST00000430407 C6orf229H3BNL8 230 aa22.56■■□□□ 1.2
RCC1-209ENST00000430407 HSPA8P11142 646 aaKnown RBP22.56■■□□□ 1.2
RCC1-209ENST00000430407 NEXNQ0ZGT2 675 aa22.56■■□□□ 1.2
RCC1-209ENST00000430407 EYA3Q99504 573 aa22.56■■□□□ 1.2
RCC1-209ENST00000430407 ZNF408Q9H9D4 720 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms