RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 UBTFL1P0CB47 393 aaPredicted RBP16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 SDSP20132 328 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 C8orf58Q8NAV2 365 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 ACBD3Q9H3P7 528 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 CDC42BPGQ6DT37 1551 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 NOP2P46087 812 aaKnown RBP16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 MCTP2Q6DN12 878 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 FAM107BQ9H098 131 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 CHMP3Q9Y3E7 222 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 CCDC171Q6TFL3 1326 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 ATP2B1P20020 1258 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 EGFL6Q8IUX8 553 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 IFNL2Q8IZJ0 200 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 TSPYL6Q8N831 410 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 SMC3Q9UQE7 1217 aa16.84■□□□□ 0.29
SYNGAP1-203ENST00000428982 KDM4FA0A1W2PPD8 638 aa16.83■□□□□ 0.29
SYNGAP1-203ENST00000428982 KMT5BQ4FZB7 885 aa16.83■□□□□ 0.29
SYNGAP1-203ENST00000428982 GBP6Q6ZN66 633 aa16.83■□□□□ 0.29
SYNGAP1-203ENST00000428982 PAIP2Q9BPZ3 127 aaKnown RBP16.83■□□□□ 0.29
SYNGAP1-203ENST00000428982 GRIPAP1Q4V328 841 aa16.83■□□□□ 0.28
SYNGAP1-203ENST00000428982 TRMT1Q9NXH9 659 aaKnown RBP16.83■□□□□ 0.28
SYNGAP1-203ENST00000428982 PNPLA6Q8IY17 1366 aa16.83■□□□□ 0.28
SYNGAP1-203ENST00000428982 CNTROBQ8N137 903 aa16.83■□□□□ 0.28
SYNGAP1-203ENST00000428982 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.83■□□□□ 0.28
SYNGAP1-203ENST00000428982 CDK12Q9NYV4 1490 aaPredicted RBP16.83■□□□□ 0.28
SYNGAP1-203ENST00000428982 FBXO38Q6PIJ6 1188 aa16.82■□□□□ 0.28
SYNGAP1-203ENST00000428982 ARHGAP29Q52LW3 1261 aa16.82■□□□□ 0.28
SYNGAP1-203ENST00000428982 BECN2A8MW95 431 aa16.82■□□□□ 0.28
SYNGAP1-203ENST00000428982 MAGEA9P43362 315 aa16.82■□□□□ 0.28
SYNGAP1-203ENST00000428982 CEP85Q6P2H3 762 aa16.82■□□□□ 0.28
SYNGAP1-203ENST00000428982 CLEC17AQ6ZS10 378 aa16.82■□□□□ 0.28
SYNGAP1-203ENST00000428982 RAB11FIP3O75154 756 aa16.81■□□□□ 0.28
SYNGAP1-203ENST00000428982 CCDC196A0A1B0GTZ2 297 aa16.81■□□□□ 0.28
SYNGAP1-203ENST00000428982 FIBPO43427 364 aa16.81■□□□□ 0.28
SYNGAP1-203ENST00000428982 MX1P20591 662 aa16.81■□□□□ 0.28
SYNGAP1-203ENST00000428982 C9orf78Q9NZ63 289 aaPredicted RBP16.81■□□□□ 0.28
SYNGAP1-203ENST00000428982 NEBLO76041 1014 aa16.81■□□□□ 0.28
SYNGAP1-203ENST00000428982 ZKSCAN1P17029 563 aaPredicted RBP16.81■□□□□ 0.28
SYNGAP1-203ENST00000428982 MUM1L1Q5H9M0 696 aa16.81■□□□□ 0.28
SYNGAP1-203ENST00000428982 AKAP4Q5JQC9 854 aa16.81■□□□□ 0.28
SYNGAP1-203ENST00000428982 KIAA0232Q92628 1395 aa16.81■□□□□ 0.28
SYNGAP1-203ENST00000428982 VIRMAQ69YN4 1812 aaKnown RBP16.8■□□□□ 0.28
SYNGAP1-203ENST00000428982 NGLY1Q96IV0 654 aa16.8■□□□□ 0.28
SYNGAP1-203ENST00000428982 NF2P35240 595 aa16.8■□□□□ 0.28
SYNGAP1-203ENST00000428982 DDIT3P35638 169 aa16.8■□□□□ 0.28
SYNGAP1-203ENST00000428982 DDX11Q96FC9 970 aa16.8■□□□□ 0.28
SYNGAP1-203ENST00000428982 INTS4Q96HW7 963 aaKnown RBP16.8■□□□□ 0.28
SYNGAP1-203ENST00000428982 RTL1A6NKG5 1358 aa16.8■□□□□ 0.28
SYNGAP1-203ENST00000428982 AIMP1Q12904 312 aaKnown RBP16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 SRLQ86TD4 932 aa16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 ADGRB2O60241 1585 aa16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 SOS1Q07889 1333 aaPredicted RBP16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 OAS2P29728 719 aaKnown RBP16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 NBPF20Q3BBV1 942 aa16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 FAM43BQ6ZT52 329 aaPredicted RBP16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 NCOA3Q9Y6Q9 1424 aa16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 EPB41L2O43491 1005 aaKnown RBP16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 EIF3JO75822 258 aaKnown RBP16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 RIC3Q7Z5B4 369 aa16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 CLIP2Q9UDT6 1046 aa16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 MAP3K5Q99683 1374 aa16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 SMARCA5O60264 1052 aaPredicted RBP16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 ZGPATQ8N5A5 531 aaKnown RBP16.79■□□□□ 0.28
SYNGAP1-203ENST00000428982 CCDC34Q96HJ3 373 aa16.78■□□□□ 0.28
SYNGAP1-203ENST00000428982 CD2BP2O95400 341 aaKnown RBP16.78■□□□□ 0.28
SYNGAP1-203ENST00000428982 PDE1AP54750 535 aa16.78■□□□□ 0.28
SYNGAP1-203ENST00000428982 BRINP3Q76B58 766 aa16.78■□□□□ 0.28
SYNGAP1-203ENST00000428982 ARHGEF25Q86VW2 580 aa16.78■□□□□ 0.28
SYNGAP1-203ENST00000428982 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
SYNGAP1-203ENST00000428982 CASTP20810 708 aaKnown RBP16.78■□□□□ 0.28
SYNGAP1-203ENST00000428982 PKP1Q13835 747 aa16.78■□□□□ 0.28
SYNGAP1-203ENST00000428982 NBPF6Q5VWK0 638 aa16.77■□□□□ 0.28
SYNGAP1-203ENST00000428982 FBXO18Q8NFZ0 1043 aa16.77■□□□□ 0.28
SYNGAP1-203ENST00000428982 ZSCAN31Q96LW9 406 aaPredicted RBP16.77■□□□□ 0.28
SYNGAP1-203ENST00000428982 NBPF4Q96M43 638 aa16.77■□□□□ 0.28
SYNGAP1-203ENST00000428982 USP31Q70CQ4 1352 aa16.77■□□□□ 0.28
SYNGAP1-203ENST00000428982 SMC2O95347 1197 aa16.77■□□□□ 0.28
SYNGAP1-203ENST00000428982 CALR3Q96L12 384 aaKnown RBP16.77■□□□□ 0.28
SYNGAP1-203ENST00000428982 IBSPP21815 317 aaPredicted RBP16.77■□□□□ 0.27
SYNGAP1-203ENST00000428982 MMS22LQ6ZRQ5 1243 aa16.77■□□□□ 0.27
SYNGAP1-203ENST00000428982 HIP1O00291 1037 aa16.77■□□□□ 0.27
SYNGAP1-203ENST00000428982 GIMAP6Q6P9H5 292 aa16.77■□□□□ 0.27
SYNGAP1-203ENST00000428982 CPSF2Q9P2I0 782 aaKnown RBP16.77■□□□□ 0.27
SYNGAP1-203ENST00000428982 EXOC5O00471 708 aa16.76■□□□□ 0.27
SYNGAP1-203ENST00000428982 ZCRB1Q8TBF4 217 aaKnown RBP16.76■□□□□ 0.27
SYNGAP1-203ENST00000428982 CHL1O00533 1208 aa16.76■□□□□ 0.27
SYNGAP1-203ENST00000428982 TMX3Q96JJ7 454 aa16.76■□□□□ 0.27
SYNGAP1-203ENST00000428982 NEMFO60524 1076 aa16.76■□□□□ 0.27
SYNGAP1-203ENST00000428982 ESYT1Q9BSJ8 1104 aa16.76■□□□□ 0.27
SYNGAP1-203ENST00000428982 SURF6O75683 361 aaKnown RBP16.75■□□□□ 0.27
SYNGAP1-203ENST00000428982 PDCP20941 246 aa16.75■□□□□ 0.27
SYNGAP1-203ENST00000428982 ERC1Q8IUD2 1116 aa16.75■□□□□ 0.27
SYNGAP1-203ENST00000428982 MEIS3Q99687 375 aa16.75■□□□□ 0.27
SYNGAP1-203ENST00000428982 IL2RBP14784 551 aa16.75■□□□□ 0.27
SYNGAP1-203ENST00000428982 MED4Q9NPJ6 270 aa16.75■□□□□ 0.27
SYNGAP1-203ENST00000428982 TMOD3Q9NYL9 352 aa16.75■□□□□ 0.27
SYNGAP1-203ENST00000428982 DNAJC21Q5F1R6 531 aaKnown RBP16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 USP48Q86UV5 1035 aa16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 ARFGAP3Q9NP61 516 aa16.74■□□□□ 0.27
SYNGAP1-203ENST00000428982 RAI14Q9P0K7 980 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms