RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 CCDC30Q5VVM6 783 aa35.18■■■■□ 3.22
LMO1-202ENST00000428101 ADAMTSL1Q8N6G6 1762 aa35.18■■■■□ 3.22
LMO1-202ENST00000428101 EAPPQ56P03 285 aaPredicted RBP35.17■■■■□ 3.22
LMO1-202ENST00000428101 NIM1KQ8IY84 436 aa35.17■■■■□ 3.22
LMO1-202ENST00000428101 GJA3Q9Y6H8 435 aa35.17■■■■□ 3.22
LMO1-202ENST00000428101 DPP8Q6V1X1 898 aaPredicted RBP35.16■■■■□ 3.22
LMO1-202ENST00000428101 MPNDQ8N594 471 aa35.16■■■■□ 3.22
LMO1-202ENST00000428101 SUPT20HQ8NEM7 779 aa35.16■■■■□ 3.22
LMO1-202ENST00000428101 LTBP1Q14766 1721 aa35.15■■■■□ 3.22
LMO1-202ENST00000428101 MYD88Q99836 296 aa35.15■■■■□ 3.22
LMO1-202ENST00000428101 CHMP4AQ9BY43 222 aa35.15■■■■□ 3.22
LMO1-202ENST00000428101 IRS4O14654 1257 aaPredicted RBP35.14■■■■□ 3.22
LMO1-202ENST00000428101 NCBP3Q53F19 620 aaKnown RBP35.14■■■■□ 3.22
LMO1-202ENST00000428101 ZBTB38Q8NAP3 1195 aaPredicted RBP35.14■■■■□ 3.22
LMO1-202ENST00000428101 PASKQ96RG2 1323 aa35.13■■■■□ 3.21
LMO1-202ENST00000428101 LRRC37AA6NMS7 1700 aa35.13■■■■□ 3.21
LMO1-202ENST00000428101 TMC4Q7Z404 712 aa35.13■■■■□ 3.21
LMO1-202ENST00000428101 PNMA8AQ86V59 439 aaPredicted RBP35.13■■■■□ 3.21
LMO1-202ENST00000428101 CELF1Q92879 486 aaKnown RBP35.13■■■■□ 3.21
LMO1-202ENST00000428101 COL4A1P02462 1669 aa35.13■■■■□ 3.21
LMO1-202ENST00000428101 IL16Q14005 1332 aa35.11■■■■□ 3.21
LMO1-202ENST00000428101 ITGBL1O95965 494 aaPredicted RBP35.11■■■■□ 3.21
LMO1-202ENST00000428101 SCNN1DP51172 638 aa35.11■■■■□ 3.21
LMO1-202ENST00000428101 METTL22Q9BUU2 404 aaPredicted RBP35.11■■■■□ 3.21
LMO1-202ENST00000428101 DUOX1Q9NRD9 1551 aa35.1■■■■□ 3.21
LMO1-202ENST00000428101 CCDC191Q8NCU4 936 aa35.1■■■■□ 3.21
LMO1-202ENST00000428101 CREBZFQ9NS37 354 aa35.1■■■■□ 3.21
LMO1-202ENST00000428101 ZNRF3Q9ULT6 936 aa35.1■■■■□ 3.21
LMO1-202ENST00000428101 CLEC11AQ9Y240 323 aa35.1■■■■□ 3.21
LMO1-202ENST00000428101 DDX58O95786 925 aaKnown RBP35.09■■■■□ 3.21
LMO1-202ENST00000428101 KIAA2012Q0VF49 1180 aa35.09■■■■□ 3.21
LMO1-202ENST00000428101 EPS15P42566 896 aa35.08■■■■□ 3.21
LMO1-202ENST00000428101 CXCL9Q07325 125 aa35.07■■■■□ 3.2
LMO1-202ENST00000428101 TWISTNBQ3B726 338 aaPredicted RBP35.07■■■■□ 3.2
LMO1-202ENST00000428101 MAP3K2Q9Y2U5 619 aa35.07■■■■□ 3.2
LMO1-202ENST00000428101 PCCAP05165 728 aaPredicted RBP35.06■■■■□ 3.2
LMO1-202ENST00000428101 LMOD1P29536 600 aaPredicted RBP35.06■■■■□ 3.2
LMO1-202ENST00000428101 CWC25Q9NXE8 425 aaPredicted RBP35.06■■■■□ 3.2
LMO1-202ENST00000428101 MAP1SQ66K74 1059 aaPredicted RBP35.05■■■■□ 3.2
LMO1-202ENST00000428101 KSR2Q6VAB6 950 aa35.05■■■■□ 3.2
LMO1-202ENST00000428101 JARID2Q92833 1246 aaPredicted RBP35.05■■■■□ 3.2
LMO1-202ENST00000428101 PI4KAP2A4QPH2 592 aa35.04■■■■□ 3.2
LMO1-202ENST00000428101 CNTROBQ8N137 903 aa35.04■■■■□ 3.2
LMO1-202ENST00000428101 PI4KAP1Q8N8J0 262 aa35.04■■■■□ 3.2
LMO1-202ENST00000428101 STK31Q9BXU1 1019 aa35.04■■■■□ 3.2
LMO1-202ENST00000428101 SALL2Q9Y467 1007 aaPredicted RBP35.03■■■■□ 3.2
LMO1-202ENST00000428101 HSP90B1P14625 803 aaKnown RBP35.02■■■■□ 3.2
LMO1-202ENST00000428101 RPS8P62241 208 aaKnown RBP35.02■■■■□ 3.2
LMO1-202ENST00000428101 SEC31BQ9NQW1 1179 aa35.02■■■■□ 3.2
LMO1-202ENST00000428101 NSFL1CQ9UNZ2 370 aaKnown RBP35.02■■■■□ 3.2
LMO1-202ENST00000428101 IGKV5-2P06315 115 aa35.01■■■■□ 3.2
LMO1-202ENST00000428101 GPSM2P81274 684 aa35.01■■■■□ 3.2
LMO1-202ENST00000428101 G2E3Q7L622 706 aa35.01■■■■□ 3.2
LMO1-202ENST00000428101 FANCIQ9NVI1 1328 aa35.01■■■■□ 3.19
LMO1-202ENST00000428101 YDJCA8MPS7 323 aa35■■■■□ 3.19
LMO1-202ENST00000428101 WDR63Q8IWG1 891 aa35■■■■□ 3.19
LMO1-202ENST00000428101 GPRC5DQ9NZD1 345 aa35■■■■□ 3.19
LMO1-202ENST00000428101 POLLQ9UGP5 575 aa35■■■■□ 3.19
LMO1-202ENST00000428101 PDE8AO60658 829 aa34.99■■■■□ 3.19
LMO1-202ENST00000428101 SLC4A2P04920 1241 aa34.99■■■■□ 3.19
LMO1-202ENST00000428101 IFFO2Q5TF58 517 aa34.99■■■■□ 3.19
LMO1-202ENST00000428101 CIAPIN1Q6FI81 312 aa34.99■■■■□ 3.19
LMO1-202ENST00000428101 RAD17O75943 681 aa34.98■■■■□ 3.19
LMO1-202ENST00000428101 USP50Q70EL3 339 aaPredicted RBP34.98■■■■□ 3.19
LMO1-202ENST00000428101 MKRN1Q9UHC7 482 aaKnown RBP34.98■■■■□ 3.19
LMO1-202ENST00000428101 TMEM88BA6NKF7 163 aa34.97■■■■□ 3.19
LMO1-202ENST00000428101 GMPSP49915 693 aaPredicted RBP34.97■■■■□ 3.19
LMO1-202ENST00000428101 WASHC4Q2M389 1173 aa34.97■■■■□ 3.19
LMO1-202ENST00000428101 CCDC152Q4G0S7 254 aa34.97■■■■□ 3.19
LMO1-202ENST00000428101 CDHR2Q9BYE9 1310 aa34.96■■■■□ 3.19
LMO1-202ENST00000428101 CACNA1FO60840 1977 aa34.96■■■■□ 3.19
LMO1-202ENST00000428101 TNIP1Q15025 636 aa34.95■■■■□ 3.19
LMO1-202ENST00000428101 CCDC85AQ96PX6 553 aaPredicted RBP34.95■■■■□ 3.19
LMO1-202ENST00000428101 ADARB2Q9NS39 739 aaKnown RBP34.95■■■■□ 3.19
LMO1-202ENST00000428101 C6orf229H3BNL8 230 aa34.94■■■■□ 3.18
LMO1-202ENST00000428101 CNTNAP1P78357 1384 aa34.94■■■■□ 3.18
LMO1-202ENST00000428101 RIMBP2O15034 1052 aa34.93■■■■□ 3.18
LMO1-202ENST00000428101 VAMP4O75379 141 aa34.93■■■■□ 3.18
LMO1-202ENST00000428101 NEXNQ0ZGT2 675 aa34.93■■■■□ 3.18
LMO1-202ENST00000428101 CWF19L2Q2TBE0 894 aaKnown RBP34.93■■■■□ 3.18
LMO1-202ENST00000428101 TBC1D16Q8TBP0 767 aa34.93■■■■□ 3.18
LMO1-202ENST00000428101 NEURL1BA8MQ27 555 aa34.92■■■■□ 3.18
LMO1-202ENST00000428101 FAM9BQ8IZU0 186 aa34.92■■■■□ 3.18
LMO1-202ENST00000428101 DBNDD1Q9H9R9 158 aa34.92■■■■□ 3.18
LMO1-202ENST00000428101 SPINK5Q9NQ38 1064 aaPredicted RBP34.92■■■■□ 3.18
LMO1-202ENST00000428101 PODXL2Q9NZ53 605 aa34.92■■■■□ 3.18
LMO1-202ENST00000428101 FLIIQ13045 1269 aa34.91■■■■□ 3.18
LMO1-202ENST00000428101 GPR101Q96P66 508 aaPredicted RBP34.91■■■■□ 3.18
LMO1-202ENST00000428101 MYH3P11055 1940 aa34.91■■■■□ 3.18
LMO1-202ENST00000428101 EXOSC9Q06265 439 aaKnown RBP34.9■■■■□ 3.18
LMO1-202ENST00000428101 BCL2L13Q9BXK5 485 aa34.9■■■■□ 3.18
LMO1-202ENST00000428101 HSPA1AP0DMV8 641 aaKnown RBP34.89■■■■□ 3.18
LMO1-202ENST00000428101 HSPA1BP0DMV9 641 aaKnown RBP34.89■■■■□ 3.18
LMO1-202ENST00000428101 CTSWP56202 376 aa34.89■■■■□ 3.18
LMO1-202ENST00000428101 EYA3Q99504 573 aa34.89■■■■□ 3.18
LMO1-202ENST00000428101 FMR1Q06787 632 aaKnown RBP eCLIP34.88■■■■□ 3.17
LMO1-202ENST00000428101 PSMD14O00487 310 aa34.87■■■■□ 3.17
LMO1-202ENST00000428101 DOK7Q18PE1 504 aa34.87■■■■□ 3.17
LMO1-202ENST00000428101 TTLL11Q8NHH1 800 aa34.87■■■■□ 3.17
LMO1-202ENST00000428101 SHTN1A0MZ66 631 aa34.86■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms