RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 CTSWP56202 376 aa15.83■□□□□ 0.12
SMIM12-203ENST00000426886 PPEF1O14829 653 aaPredicted RBP15.82■□□□□ 0.12
SMIM12-203ENST00000426886 CCDC152Q4G0S7 254 aa15.82■□□□□ 0.12
SMIM12-203ENST00000426886 TTLL11Q8NHH1 800 aa15.82■□□□□ 0.12
SMIM12-203ENST00000426886 C7orf43Q8WVR3 580 aa15.82■□□□□ 0.12
SMIM12-203ENST00000426886 GREM2Q9H772 168 aa15.82■□□□□ 0.12
SMIM12-203ENST00000426886 RCAN3Q9UKA8 241 aa15.82■□□□□ 0.12
SMIM12-203ENST00000426886 SLX4Q8IY92 1834 aa15.82■□□□□ 0.12
SMIM12-203ENST00000426886 ZKSCAN2Q63HK3 967 aa15.82■□□□□ 0.12
SMIM12-203ENST00000426886 RIC1Q4ADV7 1423 aa15.82■□□□□ 0.12
SMIM12-203ENST00000426886 PLIN1O60240 522 aa15.81■□□□□ 0.12
SMIM12-203ENST00000426886 YY1P25490 414 aa15.81■□□□□ 0.12
SMIM12-203ENST00000426886 GRAPQ13588 217 aa15.81■□□□□ 0.12
SMIM12-203ENST00000426886 EPHA10Q5JZY3 1008 aa15.81■□□□□ 0.12
SMIM12-203ENST00000426886 GRAPLQ8TC17 118 aaPredicted RBP15.81■□□□□ 0.12
SMIM12-203ENST00000426886 ARHGAP45Q92619 1136 aa15.81■□□□□ 0.12
SMIM12-203ENST00000426886 NFKBIEO00221 500 aa15.81■□□□□ 0.12
SMIM12-203ENST00000426886 USP44Q9H0E7 712 aa15.81■□□□□ 0.12
SMIM12-203ENST00000426886 BRCA1P38398 1863 aaKnown RBP15.81■□□□□ 0.12
SMIM12-203ENST00000426886 CCT4P50991 539 aaKnown RBP15.81■□□□□ 0.12
SMIM12-203ENST00000426886 SUCLG2Q96I99 432 aa15.81■□□□□ 0.12
SMIM12-203ENST00000426886 BBOX1O75936 387 aa15.8■□□□□ 0.12
SMIM12-203ENST00000426886 FAM161AQ3B820 660 aa15.8■□□□□ 0.12
SMIM12-203ENST00000426886 CCDC93Q567U6 631 aa15.8■□□□□ 0.12
SMIM12-203ENST00000426886 LMBR1LQ6UX01 489 aa15.8■□□□□ 0.12
SMIM12-203ENST00000426886 TMX4Q9H1E5 349 aaPredicted RBP15.8■□□□□ 0.12
SMIM12-203ENST00000426886 RPS8P62241 208 aaKnown RBP15.8■□□□□ 0.12
SMIM12-203ENST00000426886 FTSJ3Q8IY81 847 aaKnown RBP15.8■□□□□ 0.12
SMIM12-203ENST00000426886 CACNA1SQ13698 1873 aa15.79■□□□□ 0.12
SMIM12-203ENST00000426886 FOXO4P98177 505 aa15.79■□□□□ 0.12
SMIM12-203ENST00000426886 C9orf131Q5VYM1 1079 aa15.79■□□□□ 0.12
SMIM12-203ENST00000426886 RNF181Q9P0P0 153 aa15.79■□□□□ 0.12
SMIM12-203ENST00000426886 PRELPP51888 382 aa15.79■□□□□ 0.12
SMIM12-203ENST00000426886 TAOK3Q9H2K8 898 aa15.79■□□□□ 0.12
SMIM12-203ENST00000426886 ZNF277Q9NRM2 450 aaPredicted RBP15.79■□□□□ 0.12
SMIM12-203ENST00000426886 ATP6V0A2Q9Y487 856 aa15.79■□□□□ 0.12
SMIM12-203ENST00000426886 DDX60Q8IY21 1712 aaKnown RBP15.79■□□□□ 0.12
SMIM12-203ENST00000426886 TAF1P21675 1872 aa15.78■□□□□ 0.12
SMIM12-203ENST00000426886 ITGA6P23229 1130 aa15.78■□□□□ 0.12
SMIM12-203ENST00000426886 TMEM57Q8N5G2 664 aa15.78■□□□□ 0.12
SMIM12-203ENST00000426886 KAZALD1Q96I82 304 aa15.78■□□□□ 0.12
SMIM12-203ENST00000426886 DLEC1Q9Y238 1755 aa15.78■□□□□ 0.12
SMIM12-203ENST00000426886 RLBP1P12271 317 aa15.78■□□□□ 0.12
SMIM12-203ENST00000426886 SOGA3Q5TF21 947 aa15.78■□□□□ 0.12
SMIM12-203ENST00000426886 MEIS3Q99687 375 aa15.78■□□□□ 0.12
SMIM12-203ENST00000426886 ANP32EQ9BTT0 268 aa15.78■□□□□ 0.12
SMIM12-203ENST00000426886 PLA2G12BQ9BX93 195 aa15.78■□□□□ 0.12
SMIM12-203ENST00000426886 ANKRD18AQ8IVF6 992 aa15.77■□□□□ 0.12
SMIM12-203ENST00000426886 PANK1Q8TE04 598 aa15.77■□□□□ 0.12
SMIM12-203ENST00000426886 ZNF526Q8TF50 670 aaPredicted RBP15.77■□□□□ 0.12
SMIM12-203ENST00000426886 BICC1Q9H694 974 aaKnown RBP15.77■□□□□ 0.12
SMIM12-203ENST00000426886 NSFL1CQ9UNZ2 370 aaKnown RBP15.77■□□□□ 0.12
SMIM12-203ENST00000426886 CSF1RP07333 972 aa15.77■□□□□ 0.11
SMIM12-203ENST00000426886 DZIP1LQ8IYY4 767 aaKnown RBP15.77■□□□□ 0.11
SMIM12-203ENST00000426886 RTKN2Q8IZC4 609 aa15.77■□□□□ 0.11
SMIM12-203ENST00000426886 UBTFL1P0CB47 393 aaPredicted RBP15.76■□□□□ 0.11
SMIM12-203ENST00000426886 INTS3Q68E01 1043 aaKnown RBP15.76■□□□□ 0.11
SMIM12-203ENST00000426886 SP8Q8IXZ3 490 aa15.76■□□□□ 0.11
SMIM12-203ENST00000426886 ZNF594Q96JF6 807 aaPredicted RBP15.76■□□□□ 0.11
SMIM12-203ENST00000426886 COL4A1P02462 1669 aa15.76■□□□□ 0.11
SMIM12-203ENST00000426886 ITPRIPQ8IWB1 547 aa15.76■□□□□ 0.11
SMIM12-203ENST00000426886 CDC5LQ99459 802 aaKnown RBP15.76■□□□□ 0.11
SMIM12-203ENST00000426886 LAMB2P55268 1798 aa15.76■□□□□ 0.11
SMIM12-203ENST00000426886 LMNB1P20700 586 aa15.75■□□□□ 0.11
SMIM12-203ENST00000426886 IFIT5Q13325 482 aaKnown RBP15.75■□□□□ 0.11
SMIM12-203ENST00000426886 DPP8Q6V1X1 898 aaPredicted RBP15.75■□□□□ 0.11
SMIM12-203ENST00000426886 MPNDQ8N594 471 aa15.75■□□□□ 0.11
SMIM12-203ENST00000426886 ANKRD18BA2A2Z9 1011 aa15.75■□□□□ 0.11
SMIM12-203ENST00000426886 CCDC57Q2TAC2 916 aa15.75■□□□□ 0.11
SMIM12-203ENST00000426886 UTYO14607 1347 aa15.75■□□□□ 0.11
SMIM12-203ENST00000426886 FKBP4Q02790 459 aaKnown RBP eCLIP15.74■□□□□ 0.11
SMIM12-203ENST00000426886 TAF7LQ5H9L4 462 aa15.74■□□□□ 0.11
SMIM12-203ENST00000426886 MPHOSPH8Q99549 860 aa15.74■□□□□ 0.11
SMIM12-203ENST00000426886 ANKIB1Q9P2G1 1089 aa15.74■□□□□ 0.11
SMIM12-203ENST00000426886 ARFGEF1Q9Y6D6 1849 aa15.74■□□□□ 0.11
SMIM12-203ENST00000426886 IGHMBP2P38935 993 aaKnown RBP15.74■□□□□ 0.11
SMIM12-203ENST00000426886 LRRFIP2Q9Y608 721 aaKnown RBP15.74■□□□□ 0.11
SMIM12-203ENST00000426886 GPSM2P81274 684 aa15.73■□□□□ 0.11
SMIM12-203ENST00000426886 CC2D2BQ6DHV5 1058 aa15.73■□□□□ 0.11
SMIM12-203ENST00000426886 GPR101Q96P66 508 aaPredicted RBP15.73■□□□□ 0.11
SMIM12-203ENST00000426886 WTIPA6NIX2 430 aaPredicted RBP15.73■□□□□ 0.11
SMIM12-203ENST00000426886 C6orf229H3BNL8 230 aa15.73■□□□□ 0.11
SMIM12-203ENST00000426886 KLHDC4Q8TBB5 520 aa15.73■□□□□ 0.11
SMIM12-203ENST00000426886 ANKRD44Q8N8A2 993 aa15.72■□□□□ 0.11
SMIM12-203ENST00000426886 C20orf194Q5TEA3 1177 aa15.72■□□□□ 0.11
SMIM12-203ENST00000426886 RIMBP2O15034 1052 aa15.71■□□□□ 0.11
SMIM12-203ENST00000426886 AOC3Q16853 763 aa15.71■□□□□ 0.11
SMIM12-203ENST00000426886 TMC4Q7Z404 712 aa15.71■□□□□ 0.11
SMIM12-203ENST00000426886 HELBQ8NG08 1087 aaPredicted RBP15.71■□□□□ 0.11
SMIM12-203ENST00000426886 C1orf115Q9H7X2 142 aa15.71■□□□□ 0.11
SMIM12-203ENST00000426886 BSDC1Q9NW68 430 aaPredicted RBP15.71■□□□□ 0.11
SMIM12-203ENST00000426886 COG6Q9Y2V7 657 aa15.71■□□□□ 0.11
SMIM12-203ENST00000426886 LARGE2Q8N3Y3 721 aa15.71■□□□□ 0.11
SMIM12-203ENST00000426886 PSMD1Q99460 953 aa15.71■□□□□ 0.11
SMIM12-203ENST00000426886 POLLQ9UGP5 575 aa15.71■□□□□ 0.11
SMIM12-203ENST00000426886 MINPP1Q9UNW1 487 aa15.71■□□□□ 0.11
SMIM12-203ENST00000426886 PPIP5K2O43314 1243 aa15.7■□□□□ 0.1
SMIM12-203ENST00000426886 GNAI3P08754 354 aa15.7■□□□□ 0.1
SMIM12-203ENST00000426886 IARSP41252 1262 aaKnown RBP15.7■□□□□ 0.1
SMIM12-203ENST00000426886 LDHAL6AQ6ZMR3 332 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms