RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 AMOTQ4VCS5 1084 aa17.08■□□□□ 0.32
ERCC3-202ENST00000426778 FBXW7Q969H0 707 aa17.08■□□□□ 0.32
ERCC3-202ENST00000426778 ZNF496Q96IT1 587 aaPredicted RBP17.08■□□□□ 0.32
ERCC3-202ENST00000426778 NRBP1Q9UHY1 535 aa17.08■□□□□ 0.32
ERCC3-202ENST00000426778 LETM1O95202 739 aaPredicted RBP17.07■□□□□ 0.32
ERCC3-202ENST00000426778 DDX58O95786 925 aaKnown RBP17.07■□□□□ 0.32
ERCC3-202ENST00000426778 LRMPQ12912 555 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 ANO6Q4KMQ2 910 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 ZNF790Q6PG37 636 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 DBNDD2Q9BQY9 259 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 MED1Q15648 1581 aaPredicted RBP17.07■□□□□ 0.32
ERCC3-202ENST00000426778 NPHP4O75161 1426 aaPredicted RBP17.07■□□□□ 0.32
ERCC3-202ENST00000426778 NR1I2O75469 434 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 TYRO3Q06418 890 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 CABLES1Q8TDN4 633 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 MRVI1Q9Y6F6 885 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 DYNC1I1O14576 645 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 PSMA5P28066 241 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 GCKRQ14397 625 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 CHST3Q7LGC8 479 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 BICD2Q8TD16 824 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 TNMDQ9H2S6 317 aa17.07■□□□□ 0.32
ERCC3-202ENST00000426778 TAF5LO75529 589 aa17.06■□□□□ 0.32
ERCC3-202ENST00000426778 FGD1P98174 961 aa17.06■□□□□ 0.32
ERCC3-202ENST00000426778 NEXNQ0ZGT2 675 aa17.06■□□□□ 0.32
ERCC3-202ENST00000426778 MAP3K11Q16584 847 aa17.06■□□□□ 0.32
ERCC3-202ENST00000426778 DRC7Q8IY82 874 aa17.06■□□□□ 0.32
ERCC3-202ENST00000426778 Q6ZUG5 572 aa17.06■□□□□ 0.32
ERCC3-202ENST00000426778 ERCC4Q92889 916 aaPredicted RBP17.06■□□□□ 0.32
ERCC3-202ENST00000426778 KCNB2Q92953 911 aa17.06■□□□□ 0.32
ERCC3-202ENST00000426778 GUCY1B3Q02153 619 aa17.05■□□□□ 0.32
ERCC3-202ENST00000426778 BRF1Q92994 677 aa17.05■□□□□ 0.32
ERCC3-202ENST00000426778 RNF20Q5VTR2 975 aa17.05■□□□□ 0.32
ERCC3-202ENST00000426778 PGBD1Q96JS3 809 aa17.05■□□□□ 0.32
ERCC3-202ENST00000426778 DNAJC25Q9H1X3 360 aa17.05■□□□□ 0.32
ERCC3-202ENST00000426778 CRYBG1Q9Y4K1 1723 aa17.05■□□□□ 0.32
ERCC3-202ENST00000426778 LEO1Q8WVC0 666 aaPredicted RBP17.04■□□□□ 0.32
ERCC3-202ENST00000426778 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
ERCC3-202ENST00000426778 CCT2P78371 535 aaKnown RBP17.04■□□□□ 0.32
ERCC3-202ENST00000426778 CHRNA2Q15822 529 aa17.04■□□□□ 0.32
ERCC3-202ENST00000426778 ZNF710Q8N1W2 664 aa17.04■□□□□ 0.32
ERCC3-202ENST00000426778 MYRIPQ8NFW9 859 aa17.04■□□□□ 0.32
ERCC3-202ENST00000426778 PKNOX2Q96KN3 472 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 CBX8Q9HC52 389 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 CYP21A2P08686 494 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 CCDC186Q7Z3E2 898 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 ANKLE2Q86XL3 938 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 NCOA5Q9HCD5 579 aaKnown RBP17.03■□□□□ 0.32
ERCC3-202ENST00000426778 MED23Q9ULK4 1368 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 H3BQV1 296 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 PTPN12Q05209 780 aaKnown RBP17.03■□□□□ 0.32
ERCC3-202ENST00000426778 TNNI3KQ59H18 835 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 IFFO2Q5TF58 517 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 ANKRD13DQ6ZTN6 518 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 FAM200AQ8TCP9 573 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 NEK1Q96PY6 1258 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 FPGT-TNNI3KV9GXZ4 949 aa17.03■□□□□ 0.32
ERCC3-202ENST00000426778 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.32
ERCC3-202ENST00000426778 A0A087WZG4 1122 aa17.02■□□□□ 0.31
ERCC3-202ENST00000426778 HIP1O00291 1037 aa17.02■□□□□ 0.31
ERCC3-202ENST00000426778 TIMM10P62072 90 aa17.02■□□□□ 0.31
ERCC3-202ENST00000426778 STOX1Q6ZVD7 989 aa17.02■□□□□ 0.31
ERCC3-202ENST00000426778 CHMP4AQ9BY43 222 aa17.02■□□□□ 0.31
ERCC3-202ENST00000426778 TRIM5Q9C035 493 aa17.02■□□□□ 0.31
ERCC3-202ENST00000426778 FER1L4A9Z1Z3 1794 aa17.01■□□□□ 0.31
ERCC3-202ENST00000426778 KRT28Q7Z3Y7 464 aa17.01■□□□□ 0.31
ERCC3-202ENST00000426778 KIAA1524Q8TCG1 905 aa17.01■□□□□ 0.31
ERCC3-202ENST00000426778 HEG1Q9ULI3 1381 aa17.01■□□□□ 0.31
ERCC3-202ENST00000426778 GOLIM4O00461 696 aa17.01■□□□□ 0.31
ERCC3-202ENST00000426778 RAB11FIP4Q86YS3 637 aa17.01■□□□□ 0.31
ERCC3-202ENST00000426778 ZNF609O15014 1411 aa17.01■□□□□ 0.31
ERCC3-202ENST00000426778 APOBRQ0VD83 1088 aa17■□□□□ 0.31
ERCC3-202ENST00000426778 CCDC85AQ96PX6 553 aaPredicted RBP17■□□□□ 0.31
ERCC3-202ENST00000426778 METTL22Q9BUU2 404 aaPredicted RBP17■□□□□ 0.31
ERCC3-202ENST00000426778 SLC52A2Q9HAB3 445 aa17■□□□□ 0.31
ERCC3-202ENST00000426778 LMO7Q8WWI1 1683 aa17■□□□□ 0.31
ERCC3-202ENST00000426778 PDCP20941 246 aa17■□□□□ 0.31
ERCC3-202ENST00000426778 SCRN1Q12765 414 aa17■□□□□ 0.31
ERCC3-202ENST00000426778 LMBR1LQ6UX01 489 aa17■□□□□ 0.31
ERCC3-202ENST00000426778 ZNF594Q96JF6 807 aaPredicted RBP17■□□□□ 0.31
ERCC3-202ENST00000426778 C16orf45Q96MC5 204 aaPredicted RBP17■□□□□ 0.31
ERCC3-202ENST00000426778 GTF3C6Q969F1 213 aa17■□□□□ 0.31
ERCC3-202ENST00000426778 RGPD5Q99666 1765 aa17■□□□□ 0.31
ERCC3-202ENST00000426778 UTYO14607 1347 aa16.99■□□□□ 0.31
ERCC3-202ENST00000426778 RIOK3O14730 519 aaKnown RBP16.99■□□□□ 0.31
ERCC3-202ENST00000426778 ERBB3P21860 1342 aa16.99■□□□□ 0.31
ERCC3-202ENST00000426778 NPHP3Q7Z494 1330 aa16.99■□□□□ 0.31
ERCC3-202ENST00000426778 RFX5P48382 616 aaPredicted RBP16.99■□□□□ 0.31
ERCC3-202ENST00000426778 ARID5BQ14865 1188 aa16.99■□□□□ 0.31
ERCC3-202ENST00000426778 ANKRD1Q15327 319 aa16.99■□□□□ 0.31
ERCC3-202ENST00000426778 HSP90AB3PQ58FF7 597 aa16.99■□□□□ 0.31
ERCC3-202ENST00000426778 TTC5Q8N0Z6 440 aa16.98■□□□□ 0.31
ERCC3-202ENST00000426778 GPHNQ9NQX3 736 aaPredicted RBP16.98■□□□□ 0.31
ERCC3-202ENST00000426778 HDAC5Q9UQL6 1122 aa16.98■□□□□ 0.31
ERCC3-202ENST00000426778 ZNF330Q9Y3S2 320 aaPredicted RBP16.98■□□□□ 0.31
ERCC3-202ENST00000426778 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
ERCC3-202ENST00000426778 ZNF165P49910 485 aa16.98■□□□□ 0.31
ERCC3-202ENST00000426778 CBX1P83916 185 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms