RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 NLRP1Q9C000 1473 aa11.77□□□□□ -0.53
SP1-202ENST00000426431 METAP2P50579 478 aaKnown RBP eCLIP11.77□□□□□ -0.535e-7■■■□□ 16.2
SP1-202ENST00000426431 TNNI2P48788 182 aa11.77□□□□□ -0.53
SP1-202ENST00000426431 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.53
SP1-202ENST00000426431 FLAD1Q8NFF5 587 aa11.77□□□□□ -0.53
SP1-202ENST00000426431 NAP1L4Q99733 375 aaKnown RBP11.77□□□□□ -0.53
SP1-202ENST00000426431 SH2D4AQ9H788 454 aa11.77□□□□□ -0.53
SP1-202ENST00000426431 STK32BQ9NY57 414 aa11.77□□□□□ -0.53
SP1-202ENST00000426431 FAM83GA6ND36 823 aa11.76□□□□□ -0.53
SP1-202ENST00000426431 GOLGA6L10A6NI86 522 aa11.76□□□□□ -0.53
SP1-202ENST00000426431 WTAPQ15007 396 aa11.76□□□□□ -0.53
SP1-202ENST00000426431 EPB41L2O43491 1005 aaKnown RBP11.76□□□□□ -0.53
SP1-202ENST00000426431 NEMFO60524 1076 aa11.76□□□□□ -0.53
SP1-202ENST00000426431 RMND1Q9NWS8 449 aa11.76□□□□□ -0.53
SP1-202ENST00000426431 LMBR1LQ6UX01 489 aa11.76□□□□□ -0.53
SP1-202ENST00000426431 PLBD2Q8NHP8 589 aa11.76□□□□□ -0.53
SP1-202ENST00000426431 DDX11Q96FC9 970 aa11.76□□□□□ -0.53
SP1-202ENST00000426431 USP16Q9Y5T5 823 aa11.76□□□□□ -0.53
SP1-202ENST00000426431 CALML3P27482 149 aa11.76□□□□□ -0.53
SP1-202ENST00000426431 CCDC191Q8NCU4 936 aa11.76□□□□□ -0.53
SP1-202ENST00000426431 TAF4BQ92750 862 aa11.76□□□□□ -0.53
SP1-202ENST00000426431 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.75□□□□□ -0.53
SP1-202ENST00000426431 SUPT20HQ8NEM7 779 aa11.75□□□□□ -0.53
SP1-202ENST00000426431 EFCAB6Q5THR3 1501 aa11.75□□□□□ -0.53
SP1-202ENST00000426431 CYP7A1P22680 504 aa11.75□□□□□ -0.53
SP1-202ENST00000426431 TFCP2L1Q9NZI6 479 aa11.75□□□□□ -0.53
SP1-202ENST00000426431 PLEKHG1Q9ULL1 1385 aa11.75□□□□□ -0.53
SP1-202ENST00000426431 NFATC2IPQ8NCF5 419 aa11.75□□□□□ -0.53
SP1-202ENST00000426431 SCLT1Q96NL6 688 aa11.75□□□□□ -0.53
SP1-202ENST00000426431 DENND2AQ9ULE3 1009 aa11.75□□□□□ -0.53
SP1-202ENST00000426431 ZSCAN12O43309 604 aa11.75□□□□□ -0.53
SP1-202ENST00000426431 TSPY3P0CV98 308 aa11.75□□□□□ -0.53
SP1-202ENST00000426431 TSPY8P0CW00 308 aa11.75□□□□□ -0.53
SP1-202ENST00000426431 PDE6BP35913 854 aa11.75□□□□□ -0.53
SP1-202ENST00000426431 RBM25P49756 843 aaKnown RBP11.75□□□□□ -0.53
SP1-202ENST00000426431 BTG4Q9NY30 223 aa11.74□□□□□ -0.53
SP1-202ENST00000426431 ERVV-2B6SEH9 535 aa11.74□□□□□ -0.53
SP1-202ENST00000426431 IRS4O14654 1257 aaPredicted RBP11.74□□□□□ -0.53
SP1-202ENST00000426431 AOX1Q06278 1338 aa11.74□□□□□ -0.53
SP1-202ENST00000426431 ERBB4Q15303 1308 aa11.74□□□□□ -0.53
SP1-202ENST00000426431 SPA17Q15506 151 aa11.74□□□□□ -0.53
SP1-202ENST00000426431 TBC1D9Q6ZT07 1266 aa11.74□□□□□ -0.53
SP1-202ENST00000426431 CCDC172P0C7W6 258 aa11.74□□□□□ -0.53
SP1-202ENST00000426431 SLAIN2Q9P270 581 aa11.74□□□□□ -0.53
SP1-202ENST00000426431 KDM5AP29375 1690 aaKnown RBP11.74□□□□□ -0.53
SP1-202ENST00000426431 PDE1AP54750 535 aa11.74□□□□□ -0.53
SP1-202ENST00000426431 ORC3Q9UBD5 711 aaPredicted RBP11.74□□□□□ -0.53
SP1-202ENST00000426431 ZBTB43O43298 467 aa11.73□□□□□ -0.53
SP1-202ENST00000426431 UBA7P41226 1012 aa11.73□□□□□ -0.53
SP1-202ENST00000426431 KIF24Q5T7B8 1368 aa11.73□□□□□ -0.53
SP1-202ENST00000426431 GLT8D2Q9H1C3 349 aa11.73□□□□□ -0.53
SP1-202ENST00000426431 ARAP3Q8WWN8 1544 aa11.73□□□□□ -0.53
SP1-202ENST00000426431 VAMP4O75379 141 aa11.73□□□□□ -0.53
SP1-202ENST00000426431 EIF3JO75822 258 aaKnown RBP11.73□□□□□ -0.53
SP1-202ENST00000426431 MCM3P25205 808 aa11.73□□□□□ -0.53
SP1-202ENST00000426431 TTC6Q86TZ1 520 aa11.73□□□□□ -0.53
SP1-202ENST00000426431 SH3TC1Q8TE82 1336 aa11.73□□□□□ -0.53
SP1-202ENST00000426431 IFIT1BQ5T764 474 aaKnown RBP11.73□□□□□ -0.53
SP1-202ENST00000426431 CWC15Q9P013 229 aaKnown RBP11.73□□□□□ -0.53
SP1-202ENST00000426431 CNNM3Q8NE01 707 aa11.73□□□□□ -0.53
SP1-202ENST00000426431 GBP3Q9H0R5 595 aa11.73□□□□□ -0.53
SP1-202ENST00000426431 PAG1Q9NWQ8 432 aa11.73□□□□□ -0.53
SP1-202ENST00000426431 MAGEB6P1A0A0J9YX57 407 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 ZNF790Q6PG37 636 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 DCTPP1Q9H773 170 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 CFAP100Q494V2 611 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 CNBD1Q8NA66 436 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 KCNG4Q8TDN1 519 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 SLC4A4Q9Y6R1 1079 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 ACSBG1Q96GR2 724 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 MEIS3Q99687 375 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 HECW2Q9P2P5 1572 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 HSPA2P54652 639 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 ARHGAP29Q52LW3 1261 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 KIAA1328Q86T90 577 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 GRPEL1Q9HAV7 217 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 MYOM2P54296 1465 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 RNF113AO15541 343 aaKnown RBP11.72□□□□□ -0.53
SP1-202ENST00000426431 STX6O43752 255 aa11.72□□□□□ -0.53
SP1-202ENST00000426431 SFPQP23246 707 aaKnown RBP eCLIP11.72□□□□□ -0.53
SP1-202ENST00000426431 LMOD1P29536 600 aaPredicted RBP11.71□□□□□ -0.53
SP1-202ENST00000426431 GSDMDP57764 484 aa11.71□□□□□ -0.53
SP1-202ENST00000426431 RTN1Q16799 776 aa11.71□□□□□ -0.53
SP1-202ENST00000426431 KIAA0232Q92628 1395 aa11.71□□□□□ -0.53
SP1-202ENST00000426431 SHROOM2Q13796 1616 aa11.71□□□□□ -0.53
SP1-202ENST00000426431 GOLGA6L9A6NEM1 432 aa11.71□□□□□ -0.53
SP1-202ENST00000426431 NEBLO76041 1014 aa11.71□□□□□ -0.53
SP1-202ENST00000426431 C8orf58Q8NAV2 365 aa11.71□□□□□ -0.53
SP1-202ENST00000426431 METTL22Q9BUU2 404 aaPredicted RBP11.71□□□□□ -0.53
SP1-202ENST00000426431 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.533e-7■□□□□ 8.7
SP1-202ENST00000426431 KAT6BQ8WYB5 2073 aa11.71□□□□□ -0.53
SP1-202ENST00000426431 SLC39A6Q13433 755 aa11.71□□□□□ -0.54
SP1-202ENST00000426431 ATL3Q6DD88 541 aa11.71□□□□□ -0.54
SP1-202ENST00000426431 CCDC112Q8NEF3 446 aa11.71□□□□□ -0.54
SP1-202ENST00000426431 HELLSQ9NRZ9 838 aa11.71□□□□□ -0.54
SP1-202ENST00000426431 CCNL1Q9UK58 526 aaPredicted RBP11.71□□□□□ -0.54
SP1-202ENST00000426431 YEATS2Q9ULM3 1422 aa11.71□□□□□ -0.54
SP1-202ENST00000426431 LDHBP07195 334 aaKnown RBP11.71□□□□□ -0.54
SP1-202ENST00000426431 CACNA2D4Q7Z3S7 1137 aa11.71□□□□□ -0.54
SP1-202ENST00000426431 RBM28Q9NW13 759 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms