RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 A0A0D9SFI3 127 aa20.44■□□□□ 0.86
RARA-206ENST00000425707 ZNF165P49910 485 aa20.44■□□□□ 0.86
RARA-206ENST00000425707 FERMT3Q86UX7 667 aa20.44■□□□□ 0.86
RARA-206ENST00000425707 MRFAP1L1Q96HT8 127 aa20.44■□□□□ 0.86
RARA-206ENST00000425707 PA2G4Q9UQ80 394 aaKnown RBP20.44■□□□□ 0.86
RARA-206ENST00000425707 ZBTB7CA1YPR0 619 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 LTV1Q96GA3 475 aaPredicted RBP20.43■□□□□ 0.86
RARA-206ENST00000425707 DDX58O95786 925 aaKnown RBP20.43■□□□□ 0.86
RARA-206ENST00000425707 CBX1P83916 185 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 NBPF6Q5VWK0 638 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 ATL3Q6DD88 541 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 TICAM2Q86XR7 235 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 NBPF4Q96M43 638 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 ARID3AQ99856 593 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 LLPHQ9BRT6 129 aaKnown RBP20.43■□□□□ 0.86
RARA-206ENST00000425707 FSD1Q9BTV5 496 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 OGFRQ9NZT2 677 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 KCNQ3O43525 872 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 NCBP1Q09161 790 aaKnown RBP20.43■□□□□ 0.86
RARA-206ENST00000425707 CKAP2LQ8IYA6 745 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 PGBD1Q96JS3 809 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 KCND1Q9NSA2 647 aa20.43■□□□□ 0.86
RARA-206ENST00000425707 RGPD2P0DJD1 1756 aa20.42■□□□□ 0.86
RARA-206ENST00000425707 RBM6P78332 1123 aaKnown RBP20.42■□□□□ 0.86
RARA-206ENST00000425707 KAZALD1Q96I82 304 aa20.42■□□□□ 0.86
RARA-206ENST00000425707 CGNQ9P2M7 1197 aaKnown RBP20.42■□□□□ 0.86
RARA-206ENST00000425707 TAF5LO75529 589 aa20.42■□□□□ 0.86
RARA-206ENST00000425707 DRC7Q8IY82 874 aa20.42■□□□□ 0.86
RARA-206ENST00000425707 USHBP1Q8N6Y0 703 aa20.42■□□□□ 0.86
RARA-206ENST00000425707 SUCLG2Q96I99 432 aa20.41■□□□□ 0.86
RARA-206ENST00000425707 PRDM10Q9NQV6 1147 aa20.41■□□□□ 0.86
RARA-206ENST00000425707 RNMTO43148 476 aaKnown RBP20.41■□□□□ 0.86
RARA-206ENST00000425707 NR1I2O75469 434 aa20.41■□□□□ 0.86
RARA-206ENST00000425707 CLIP2Q9UDT6 1046 aa20.41■□□□□ 0.86
RARA-206ENST00000425707 TNNT1P13805 278 aa20.4■□□□□ 0.86
RARA-206ENST00000425707 FAM173BQ6P4H8 233 aa20.4■□□□□ 0.86
RARA-206ENST00000425707 KCNH5Q8NCM2 988 aa20.4■□□□□ 0.86
RARA-206ENST00000425707 IQCB1Q15051 598 aa20.4■□□□□ 0.86
RARA-206ENST00000425707 ZNF530Q6P9A1 599 aaPredicted RBP20.4■□□□□ 0.86
RARA-206ENST00000425707 NAA16Q6N069 864 aaPredicted RBP20.4■□□□□ 0.86
RARA-206ENST00000425707 SMARCC2Q8TAQ2 1214 aa20.4■□□□□ 0.86
RARA-206ENST00000425707 BICD2Q8TD16 824 aa20.4■□□□□ 0.86
RARA-206ENST00000425707 U3KPZ7 1027 aaPredicted RBP20.4■□□□□ 0.86
RARA-206ENST00000425707 COL15A1P39059 1388 aa20.39■□□□□ 0.86
RARA-206ENST00000425707 BICC1Q9H694 974 aaKnown RBP20.39■□□□□ 0.85
RARA-206ENST00000425707 DDX21Q9NR30 783 aaKnown RBP eCLIP20.39■□□□□ 0.85
RARA-206ENST00000425707 TFIP11Q9UBB9 837 aaKnown RBP20.39■□□□□ 0.85
RARA-206ENST00000425707 ATP5JP18859 108 aa20.39■□□□□ 0.85
RARA-206ENST00000425707 LRMPQ12912 555 aa20.39■□□□□ 0.85
RARA-206ENST00000425707 FAM177BA6PVY3 158 aa20.38■□□□□ 0.85
RARA-206ENST00000425707 ANXA1P04083 346 aa20.38■□□□□ 0.85
RARA-206ENST00000425707 CCDC112Q8NEF3 446 aa20.38■□□□□ 0.85
RARA-206ENST00000425707 NEK1Q96PY6 1258 aa20.38■□□□□ 0.85
RARA-206ENST00000425707 STX1AQ16623 288 aa20.38■□□□□ 0.85
RARA-206ENST00000425707 CWF19L2Q2TBE0 894 aaKnown RBP20.38■□□□□ 0.85
RARA-206ENST00000425707 CACTINQ8WUQ7 758 aaKnown RBP20.38■□□□□ 0.85
RARA-206ENST00000425707 DNAJC25Q9H1X3 360 aa20.38■□□□□ 0.85
RARA-206ENST00000425707 NRBP1Q9UHY1 535 aa20.38■□□□□ 0.85
RARA-206ENST00000425707 RCOR1Q9UKL0 485 aa20.38■□□□□ 0.85
RARA-206ENST00000425707 CHMP3Q9Y3E7 222 aa20.38■□□□□ 0.85
RARA-206ENST00000425707 NUTM2GQ5VZR2 741 aa20.37■□□□□ 0.85
RARA-206ENST00000425707 DDX54Q8TDD1 881 aaKnown RBP20.37■□□□□ 0.85
RARA-206ENST00000425707 CCDC8Q9H0W5 538 aaPredicted RBP20.37■□□□□ 0.85
RARA-206ENST00000425707 CTNNA3Q9UI47 895 aa20.37■□□□□ 0.85
RARA-206ENST00000425707 HMGB1P09429 215 aaKnown RBP20.37■□□□□ 0.85
RARA-206ENST00000425707 GOLGA6L19H0YKK7 550 aa20.37■□□□□ 0.85
RARA-206ENST00000425707 ZNF589Q86UQ0 364 aaPredicted RBP20.37■□□□□ 0.85
RARA-206ENST00000425707 LRRC8AQ8IWT6 810 aa20.37■□□□□ 0.85
RARA-206ENST00000425707 BRF1Q92994 677 aa20.37■□□□□ 0.85
RARA-206ENST00000425707 C16orf45Q96MC5 204 aaPredicted RBP20.37■□□□□ 0.85
RARA-206ENST00000425707 BOLA2Q9H3K6 86 aa20.37■□□□□ 0.85
RARA-206ENST00000425707 GABPB1Q06547 395 aaPredicted RBP20.36■□□□□ 0.85
RARA-206ENST00000425707 PROSER3Q2NL68 480 aa20.36■□□□□ 0.85
RARA-206ENST00000425707 CHMP4CQ96CF2 233 aa20.36■□□□□ 0.85
RARA-206ENST00000425707 U2AF2P26368 475 aaKnown RBP eCLIP20.36■□□□□ 0.85
RARA-206ENST00000425707 COL9A3Q14050 684 aaPredicted RBP20.36■□□□□ 0.85
RARA-206ENST00000425707 C1orf141Q5JVX7 400 aa20.36■□□□□ 0.85
RARA-206ENST00000425707 COPRSQ9NQ92 184 aa20.36■□□□□ 0.85
RARA-206ENST00000425707 TLR7Q9NYK1 1049 aaKnown RBP20.36■□□□□ 0.85
RARA-206ENST00000425707 THEMISQ8N1K5 641 aaPredicted RBP20.35■□□□□ 0.85
RARA-206ENST00000425707 PXDNQ92626 1479 aa20.35■□□□□ 0.85
RARA-206ENST00000425707 PFKFB2O60825 505 aa20.35■□□□□ 0.85
RARA-206ENST00000425707 TPD52L1Q16890 204 aaPredicted RBP20.35■□□□□ 0.85
RARA-206ENST00000425707 NYAP1Q6ZVC0 841 aa20.35■□□□□ 0.85
RARA-206ENST00000425707 PHF8Q9UPP1 1060 aa20.35■□□□□ 0.85
RARA-206ENST00000425707 TAF6LQ9Y6J9 622 aa20.35■□□□□ 0.85
RARA-206ENST00000425707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.35■□□□□ 0.85
RARA-206ENST00000425707 H3BQV1 296 aa20.35■□□□□ 0.85
RARA-206ENST00000425707 KIF2AO00139 706 aaPredicted RBP20.35■□□□□ 0.85
RARA-206ENST00000425707 ADD1P35611 737 aaKnown RBP20.35■□□□□ 0.85
RARA-206ENST00000425707 DHX8Q14562 1220 aaKnown RBP20.35■□□□□ 0.85
RARA-206ENST00000425707 IFFO2Q5TF58 517 aa20.35■□□□□ 0.85
RARA-206ENST00000425707 CEP135Q66GS9 1140 aa20.35■□□□□ 0.85
RARA-206ENST00000425707 DDX41Q9UJV9 622 aaKnown RBP20.35■□□□□ 0.85
RARA-206ENST00000425707 LAMA4Q16363 1823 aa20.34■□□□□ 0.85
RARA-206ENST00000425707 CCDC144BQ3MJ40 725 aa20.34■□□□□ 0.85
RARA-206ENST00000425707 MPRIPQ6WCQ1 1025 aa20.34■□□□□ 0.85
RARA-206ENST00000425707 CCDC144CPQ8IYA2 1237 aa20.34■□□□□ 0.85
RARA-206ENST00000425707 SLIT3O75094 1523 aa20.34■□□□□ 0.85
RARA-206ENST00000425707 TCEANC2Q96MN5 208 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms