RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 DNAAF4Q8WXU2 420 aa22.9■■□□□ 1.26
IGHV3-47-201ENST00000425060 JARID2Q92833 1246 aaPredicted RBP22.9■■□□□ 1.26
IGHV3-47-201ENST00000425060 CDHR2Q9BYE9 1310 aa22.89■■□□□ 1.26
IGHV3-47-201ENST00000425060 TAF1P21675 1872 aa22.89■■□□□ 1.25
IGHV3-47-201ENST00000425060 H7C1W4 665 aa22.87■■□□□ 1.25
IGHV3-47-201ENST00000425060 PDE8AO60658 829 aa22.87■■□□□ 1.25
IGHV3-47-201ENST00000425060 HSP90B1P14625 803 aaKnown RBP22.87■■□□□ 1.25
IGHV3-47-201ENST00000425060 IARSP41252 1262 aaKnown RBP22.87■■□□□ 1.25
IGHV3-47-201ENST00000425060 CELF1Q92879 486 aaKnown RBP22.87■■□□□ 1.25
IGHV3-47-201ENST00000425060 RRAGCQ9HB90 399 aa22.87■■□□□ 1.25
IGHV3-47-201ENST00000425060 COL4A1P02462 1669 aa22.87■■□□□ 1.25
IGHV3-47-201ENST00000425060 GCKRQ14397 625 aa22.86■■□□□ 1.25
IGHV3-47-201ENST00000425060 LINS1Q8NG48 757 aa22.86■■□□□ 1.25
IGHV3-47-201ENST00000425060 POTECB2RU33 542 aa22.85■■□□□ 1.25
IGHV3-47-201ENST00000425060 F6X3S4 739 aa22.85■■□□□ 1.25
IGHV3-47-201ENST00000425060 DPY19L2Q6NUT2 758 aa22.85■■□□□ 1.25
IGHV3-47-201ENST00000425060 TMC4Q7Z404 712 aa22.85■■□□□ 1.25
IGHV3-47-201ENST00000425060 RTFDC1Q9BY42 306 aaPredicted RBP22.85■■□□□ 1.25
IGHV3-47-201ENST00000425060 CASP7P55210 303 aa22.84■■□□□ 1.25
IGHV3-47-201ENST00000425060 BEND3Q5T5X7 828 aa22.84■■□□□ 1.25
IGHV3-47-201ENST00000425060 MRPL50Q8N5N7 158 aaKnown RBP22.84■■□□□ 1.25
IGHV3-47-201ENST00000425060 COL4A5P29400 1685 aa22.84■■□□□ 1.25
IGHV3-47-201ENST00000425060 FZD9O00144 591 aa22.83■■□□□ 1.25
IGHV3-47-201ENST00000425060 TOMM70O94826 608 aa22.83■■□□□ 1.25
IGHV3-47-201ENST00000425060 TMX4Q9H1E5 349 aaPredicted RBP22.83■■□□□ 1.25
IGHV3-47-201ENST00000425060 SEC31BQ9NQW1 1179 aa22.83■■□□□ 1.25
IGHV3-47-201ENST00000425060 RPS8P62241 208 aaKnown RBP22.82■■□□□ 1.24
IGHV3-47-201ENST00000425060 CCDC152Q4G0S7 254 aa22.82■■□□□ 1.24
IGHV3-47-201ENST00000425060 MPNDQ8N594 471 aa22.82■■□□□ 1.24
IGHV3-47-201ENST00000425060 VPS33BQ9H267 617 aa22.82■■□□□ 1.24
IGHV3-47-201ENST00000425060 LRRC37AA6NMS7 1700 aa22.82■■□□□ 1.24
IGHV3-47-201ENST00000425060 WDR90Q96KV7 1748 aa22.82■■□□□ 1.24
IGHV3-47-201ENST00000425060 DDNO94850 711 aaPredicted RBP22.81■■□□□ 1.24
IGHV3-47-201ENST00000425060 UBE3BQ7Z3V4 1068 aa22.81■■□□□ 1.24
IGHV3-47-201ENST00000425060 TTLL11Q8NHH1 800 aa22.81■■□□□ 1.24
IGHV3-47-201ENST00000425060 SSH1Q8WYL5 1049 aa22.81■■□□□ 1.24
IGHV3-47-201ENST00000425060 PLA2G12BQ9BX93 195 aa22.81■■□□□ 1.24
IGHV3-47-201ENST00000425060 VEGFAP15692 232 aaPredicted RBP22.8■■□□□ 1.24
IGHV3-47-201ENST00000425060 CTSWP56202 376 aa22.8■■□□□ 1.24
IGHV3-47-201ENST00000425060 DPP8Q6V1X1 898 aaPredicted RBP22.8■■□□□ 1.24
IGHV3-47-201ENST00000425060 ZNF541Q9H0D2 1346 aa22.8■■□□□ 1.24
IGHV3-47-201ENST00000425060 SUPT20HQ8NEM7 779 aa22.79■■□□□ 1.24
IGHV3-47-201ENST00000425060 JDP2Q8WYK2 163 aa22.79■■□□□ 1.24
IGHV3-47-201ENST00000425060 CCDC85AQ96PX6 553 aaPredicted RBP22.79■■□□□ 1.24
IGHV3-47-201ENST00000425060 ALDH1L2Q3SY69 923 aa22.78■■□□□ 1.24
IGHV3-47-201ENST00000425060 LARGE2Q8N3Y3 721 aa22.78■■□□□ 1.24
IGHV3-47-201ENST00000425060 RBM46Q8TBY0 533 aaKnown RBP22.78■■□□□ 1.24
IGHV3-47-201ENST00000425060 L3MBTL3Q96JM7 780 aaPredicted RBP22.78■■□□□ 1.24
IGHV3-47-201ENST00000425060 DUOX1Q9NRD9 1551 aa22.78■■□□□ 1.24
IGHV3-47-201ENST00000425060 RTL9Q8NET4 1388 aa22.77■■□□□ 1.24
IGHV3-47-201ENST00000425060 CT47B1P0C2W7 299 aaPredicted RBP22.77■■□□□ 1.24
IGHV3-47-201ENST00000425060 PPIP5K2O43314 1243 aa22.76■■□□□ 1.23
IGHV3-47-201ENST00000425060 CSF1RP07333 972 aa22.76■■□□□ 1.23
IGHV3-47-201ENST00000425060 KIAA2012Q0VF49 1180 aa22.76■■□□□ 1.23
IGHV3-47-201ENST00000425060 AOC3Q16853 763 aa22.76■■□□□ 1.23
IGHV3-47-201ENST00000425060 GREM2Q9H772 168 aa22.76■■□□□ 1.23
IGHV3-47-201ENST00000425060 MYH3P11055 1940 aa22.75■■□□□ 1.23
IGHV3-47-201ENST00000425060 ALDH1L1O75891 902 aa22.75■■□□□ 1.23
IGHV3-47-201ENST00000425060 GPSM2P81274 684 aa22.75■■□□□ 1.23
IGHV3-47-201ENST00000425060 NSFL1CQ9UNZ2 370 aaKnown RBP22.75■■□□□ 1.23
IGHV3-47-201ENST00000425060 PTPRCP08575 1304 aa22.75■■□□□ 1.23
IGHV3-47-201ENST00000425060 LTBP1Q14766 1721 aa22.74■■□□□ 1.23
IGHV3-47-201ENST00000425060 C16orf71Q8IYS4 520 aaPredicted RBP22.74■■□□□ 1.23
IGHV3-47-201ENST00000425060 PODXL2Q9NZ53 605 aa22.74■■□□□ 1.23
IGHV3-47-201ENST00000425060 POLLQ9UGP5 575 aa22.74■■□□□ 1.23
IGHV3-47-201ENST00000425060 ANKRD18AQ8IVF6 992 aa22.73■■□□□ 1.23
IGHV3-47-201ENST00000425060 NIM1KQ8IY84 436 aa22.73■■□□□ 1.23
IGHV3-47-201ENST00000425060 GPC2Q8N158 579 aa22.73■■□□□ 1.23
IGHV3-47-201ENST00000425060 BCL2L13Q9BXK5 485 aa22.73■■□□□ 1.23
IGHV3-47-201ENST00000425060 SRCIN1Q9C0H9 1055 aa22.73■■□□□ 1.23
IGHV3-47-201ENST00000425060 BRPF1P55201 1214 aaPredicted RBP22.72■■□□□ 1.23
IGHV3-47-201ENST00000425060 EIF6P56537 245 aaKnown RBP22.72■■□□□ 1.23
IGHV3-47-201ENST00000425060 FOXO4P98177 505 aa22.72■■□□□ 1.23
IGHV3-47-201ENST00000425060 SLC4A10Q6U841 1118 aa22.72■■□□□ 1.23
IGHV3-47-201ENST00000425060 CDC5LQ99459 802 aaKnown RBP22.72■■□□□ 1.23
IGHV3-47-201ENST00000425060 GRM8O00222 908 aa22.71■■□□□ 1.23
IGHV3-47-201ENST00000425060 HSPA6P17066 643 aa22.71■■□□□ 1.23
IGHV3-47-201ENST00000425060 FSTL1Q12841 308 aa22.71■■□□□ 1.23
IGHV3-47-201ENST00000425060 TBC1D16Q8TBP0 767 aa22.71■■□□□ 1.23
IGHV3-47-201ENST00000425060 BSDC1Q9NW68 430 aaPredicted RBP22.71■■□□□ 1.23
IGHV3-47-201ENST00000425060 ZNRF3Q9ULT6 936 aa22.71■■□□□ 1.23
IGHV3-47-201ENST00000425060 HNRNPUQ00839 825 aaKnown RBP eCLIP22.7■■□□□ 1.22
IGHV3-47-201ENST00000425060 SCN4AP35499 1836 aa22.7■■□□□ 1.22
IGHV3-47-201ENST00000425060 IQCA1LA6NCM1 817 aa22.69■■□□□ 1.22
IGHV3-47-201ENST00000425060 CXCL9Q07325 125 aa22.69■■□□□ 1.22
IGHV3-47-201ENST00000425060 WASHC4Q2M389 1173 aa22.69■■□□□ 1.22
IGHV3-47-201ENST00000425060 FAM161AQ3B820 660 aa22.69■■□□□ 1.22
IGHV3-47-201ENST00000425060 EPHA10Q5JZY3 1008 aa22.69■■□□□ 1.22
IGHV3-47-201ENST00000425060 TAF1DQ9H5J8 278 aaPredicted RBP22.69■■□□□ 1.22
IGHV3-47-201ENST00000425060 SMC4Q9NTJ3 1288 aa22.69■■□□□ 1.22
IGHV3-47-201ENST00000425060 UTYO14607 1347 aa22.68■■□□□ 1.22
IGHV3-47-201ENST00000425060 C6orf229H3BNL8 230 aa22.68■■□□□ 1.22
IGHV3-47-201ENST00000425060 ITGA6P23229 1130 aa22.68■■□□□ 1.22
IGHV3-47-201ENST00000425060 RARSP54136 660 aaKnown RBP22.68■■□□□ 1.22
IGHV3-47-201ENST00000425060 SMC1BQ8NDV3 1235 aa22.68■■□□□ 1.22
IGHV3-47-201ENST00000425060 C9orf78Q9NZ63 289 aaPredicted RBP22.68■■□□□ 1.22
IGHV3-47-201ENST00000425060 MINPP1Q9UNW1 487 aa22.68■■□□□ 1.22
IGHV3-47-201ENST00000425060 YDJCA8MPS7 323 aa22.67■■□□□ 1.22
IGHV3-47-201ENST00000425060 HACL1Q9UJ83 578 aa22.67■■□□□ 1.22
IGHV3-47-201ENST00000425060 GJA3Q9Y6H8 435 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms