RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 METTL22Q9BUU2 404 aaPredicted RBP23.8■■□□□ 1.4
NUP50-207ENST00000424634 CHMP4AQ9BY43 222 aa23.8■■□□□ 1.4
NUP50-207ENST00000424634 PPIP5K2O43314 1243 aa23.79■■□□□ 1.4
NUP50-207ENST00000424634 EIF6P56537 245 aaKnown RBP23.79■■□□□ 1.4
NUP50-207ENST00000424634 MPNDQ8N594 471 aa23.79■■□□□ 1.4
NUP50-207ENST00000424634 JARID2Q92833 1246 aaPredicted RBP23.79■■□□□ 1.4
NUP50-207ENST00000424634 CELF1Q92879 486 aaKnown RBP23.79■■□□□ 1.4
NUP50-207ENST00000424634 HACL1Q9UJ83 578 aa23.79■■□□□ 1.4
NUP50-207ENST00000424634 DPP8Q6V1X1 898 aaPredicted RBP23.78■■□□□ 1.4
NUP50-207ENST00000424634 G2E3Q7L622 706 aa23.78■■□□□ 1.4
NUP50-207ENST00000424634 CCDC191Q8NCU4 936 aa23.78■■□□□ 1.4
NUP50-207ENST00000424634 KLRG1Q96E93 195 aa23.78■■□□□ 1.4
NUP50-207ENST00000424634 VPS33BQ9H267 617 aa23.78■■□□□ 1.4
NUP50-207ENST00000424634 MAP3K2Q9Y2U5 619 aa23.78■■□□□ 1.4
NUP50-207ENST00000424634 GJA3Q9Y6H8 435 aa23.78■■□□□ 1.4
NUP50-207ENST00000424634 PCNTO95613 3336 aa23.78■■□□□ 1.4
NUP50-207ENST00000424634 DDX58O95786 925 aaKnown RBP23.77■■□□□ 1.4
NUP50-207ENST00000424634 EPHX2P34913 555 aa23.77■■□□□ 1.4
NUP50-207ENST00000424634 KSR2Q6VAB6 950 aa23.77■■□□□ 1.4
NUP50-207ENST00000424634 WDR63Q8IWG1 891 aa23.77■■□□□ 1.4
NUP50-207ENST00000424634 FAM9BQ8IZU0 186 aa23.77■■□□□ 1.4
NUP50-207ENST00000424634 FANCIQ9NVI1 1328 aa23.77■■□□□ 1.4
NUP50-207ENST00000424634 PI4KAP2A4QPH2 592 aa23.76■■□□□ 1.39
NUP50-207ENST00000424634 LDHDQ86WU2 507 aa23.76■■□□□ 1.39
NUP50-207ENST00000424634 NIM1KQ8IY84 436 aa23.76■■□□□ 1.39
NUP50-207ENST00000424634 PI4KAP1Q8N8J0 262 aa23.76■■□□□ 1.39
NUP50-207ENST00000424634 SUPT20HQ8NEM7 779 aa23.76■■□□□ 1.39
NUP50-207ENST00000424634 CWC25Q9NXE8 425 aaPredicted RBP23.76■■□□□ 1.39
NUP50-207ENST00000424634 LRRC37AA6NMS7 1700 aa23.76■■□□□ 1.39
NUP50-207ENST00000424634 LTBP1Q14766 1721 aa23.76■■□□□ 1.39
NUP50-207ENST00000424634 SLC4A2P04920 1241 aa23.75■■□□□ 1.39
NUP50-207ENST00000424634 PCCAP05165 728 aaPredicted RBP23.75■■□□□ 1.39
NUP50-207ENST00000424634 IGKV5-2P06315 115 aa23.75■■□□□ 1.39
NUP50-207ENST00000424634 EAPPQ56P03 285 aaPredicted RBP23.75■■□□□ 1.39
NUP50-207ENST00000424634 TMC4Q7Z404 712 aa23.75■■□□□ 1.39
NUP50-207ENST00000424634 STK31Q9BXU1 1019 aa23.75■■□□□ 1.39
NUP50-207ENST00000424634 SPINK5Q9NQ38 1064 aaPredicted RBP23.75■■□□□ 1.39
NUP50-207ENST00000424634 ADAMTSL1Q8N6G6 1762 aa23.74■■□□□ 1.39
NUP50-207ENST00000424634 DUOX1Q9NRD9 1551 aa23.74■■□□□ 1.39
NUP50-207ENST00000424634 VAMP4O75379 141 aa23.73■■□□□ 1.39
NUP50-207ENST00000424634 SCNN1DP51172 638 aa23.73■■□□□ 1.39
NUP50-207ENST00000424634 KIAA2012Q0VF49 1180 aa23.73■■□□□ 1.39
NUP50-207ENST00000424634 SEC31BQ9NQW1 1179 aa23.73■■□□□ 1.39
NUP50-207ENST00000424634 ZNRF3Q9ULT6 936 aa23.73■■□□□ 1.39
NUP50-207ENST00000424634 ITGBL1O95965 494 aaPredicted RBP23.72■■□□□ 1.39
NUP50-207ENST00000424634 EPS15P42566 896 aa23.72■■□□□ 1.39
NUP50-207ENST00000424634 RPS8P62241 208 aaKnown RBP23.72■■□□□ 1.39
NUP50-207ENST00000424634 CXCL9Q07325 125 aa23.72■■□□□ 1.39
NUP50-207ENST00000424634 PASKQ96RG2 1323 aa23.71■■□□□ 1.39
NUP50-207ENST00000424634 EXOSC9Q06265 439 aaKnown RBP23.71■■□□□ 1.39
NUP50-207ENST00000424634 PNMA8AQ86V59 439 aaPredicted RBP23.71■■□□□ 1.39
NUP50-207ENST00000424634 JMYQ8N9B5 988 aa23.71■■□□□ 1.39
NUP50-207ENST00000424634 NSFL1CQ9UNZ2 370 aaKnown RBP23.71■■□□□ 1.39
NUP50-207ENST00000424634 CLEC11AQ9Y240 323 aa23.71■■□□□ 1.39
NUP50-207ENST00000424634 PDE8AO60658 829 aa23.7■■□□□ 1.38
NUP50-207ENST00000424634 GPSM2P81274 684 aa23.7■■□□□ 1.38
NUP50-207ENST00000424634 CWF19L2Q2TBE0 894 aaKnown RBP23.7■■□□□ 1.38
NUP50-207ENST00000424634 POLLQ9UGP5 575 aa23.7■■□□□ 1.38
NUP50-207ENST00000424634 CACNA1FO60840 1977 aa23.69■■□□□ 1.38
NUP50-207ENST00000424634 HSP90B1P14625 803 aaKnown RBP23.69■■□□□ 1.38
NUP50-207ENST00000424634 CCDC85AQ96PX6 553 aaPredicted RBP23.69■■□□□ 1.38
NUP50-207ENST00000424634 CDHR2Q9BYE9 1310 aa23.68■■□□□ 1.38
NUP50-207ENST00000424634 YDJCA8MPS7 323 aa23.68■■□□□ 1.38
NUP50-207ENST00000424634 NEURL1BA8MQ27 555 aa23.68■■□□□ 1.38
NUP50-207ENST00000424634 FLIIQ13045 1269 aa23.68■■□□□ 1.38
NUP50-207ENST00000424634 MAP1SQ66K74 1059 aaPredicted RBP23.68■■□□□ 1.38
NUP50-207ENST00000424634 RAD17O75943 681 aa23.67■■□□□ 1.38
NUP50-207ENST00000424634 LMOD1P29536 600 aaPredicted RBP23.67■■□□□ 1.38
NUP50-207ENST00000424634 CCDC152Q4G0S7 254 aa23.67■■□□□ 1.38
NUP50-207ENST00000424634 CREBZFQ9NS37 354 aa23.67■■□□□ 1.38
NUP50-207ENST00000424634 NEXNQ0ZGT2 675 aa23.66■■□□□ 1.38
NUP50-207ENST00000424634 WASHC4Q2M389 1173 aa23.66■■□□□ 1.38
NUP50-207ENST00000424634 CIAPIN1Q6FI81 312 aa23.66■■□□□ 1.38
NUP50-207ENST00000424634 CNTROBQ8N137 903 aa23.66■■□□□ 1.38
NUP50-207ENST00000424634 C6orf229H3BNL8 230 aa23.65■■□□□ 1.38
NUP50-207ENST00000424634 H7C1W4 665 aa23.65■■□□□ 1.38
NUP50-207ENST00000424634 RIMBP2O15034 1052 aa23.65■■□□□ 1.38
NUP50-207ENST00000424634 TBC1D16Q8TBP0 767 aa23.65■■□□□ 1.38
NUP50-207ENST00000424634 GPR101Q96P66 508 aaPredicted RBP23.65■■□□□ 1.38
NUP50-207ENST00000424634 GPRC5DQ9NZD1 345 aa23.65■■□□□ 1.38
NUP50-207ENST00000424634 GMPSP49915 693 aaPredicted RBP23.64■■□□□ 1.37
NUP50-207ENST00000424634 TTLL11Q8NHH1 800 aa23.64■■□□□ 1.37
NUP50-207ENST00000424634 MYH3P11055 1940 aa23.63■■□□□ 1.37
NUP50-207ENST00000424634 CTSWP56202 376 aa23.63■■□□□ 1.37
NUP50-207ENST00000424634 FKBP5Q13451 457 aaPredicted RBP23.63■■□□□ 1.37
NUP50-207ENST00000424634 USP50Q70EL3 339 aaPredicted RBP23.63■■□□□ 1.37
NUP50-207ENST00000424634 DBNDD1Q9H9R9 158 aa23.63■■□□□ 1.37
NUP50-207ENST00000424634 PODXL2Q9NZ53 605 aa23.63■■□□□ 1.37
NUP50-207ENST00000424634 ZNF521Q96K83 1311 aa23.62■■□□□ 1.37
NUP50-207ENST00000424634 GCKRQ14397 625 aa23.62■■□□□ 1.37
NUP50-207ENST00000424634 TNIP1Q15025 636 aa23.62■■□□□ 1.37
NUP50-207ENST00000424634 DNAAF4Q8WXU2 420 aa23.62■■□□□ 1.37
NUP50-207ENST00000424634 KCNQ5Q9NR82 932 aa23.62■■□□□ 1.37
NUP50-207ENST00000424634 DOK7Q18PE1 504 aa23.61■■□□□ 1.37
NUP50-207ENST00000424634 UBE3BQ7Z3V4 1068 aa23.61■■□□□ 1.37
NUP50-207ENST00000424634 MYH16Q9H6N6 1097 aa23.61■■□□□ 1.37
NUP50-207ENST00000424634 ADARB2Q9NS39 739 aaKnown RBP23.61■■□□□ 1.37
NUP50-207ENST00000424634 MKRN1Q9UHC7 482 aaKnown RBP23.61■■□□□ 1.37
NUP50-207ENST00000424634 TMEM88BA6NKF7 163 aa23.6■■□□□ 1.37
NUP50-207ENST00000424634 CASP7P55210 303 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms