RNA–Protein interactions for RNA: ENST00000424362.5

BRPF1-203, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-203ENST00000424362 ZHX3Q9H4I2 956 aa20.23■□□□□ 0.83
BRPF1-203ENST00000424362 ZHX1Q9UKY1 873 aaPredicted RBP20.23■□□□□ 0.83
BRPF1-203ENST00000424362 LDHAL6AQ6ZMR3 332 aa20.23■□□□□ 0.83
BRPF1-203ENST00000424362 CPLX3Q8WVH0 158 aa20.23■□□□□ 0.83
BRPF1-203ENST00000424362 RAD50Q92878 1312 aa20.23■□□□□ 0.83
BRPF1-203ENST00000424362 TMEM67Q5HYA8 995 aa20.23■□□□□ 0.83
BRPF1-203ENST00000424362 POLR3GO15318 223 aaPredicted RBP20.22■□□□□ 0.83
BRPF1-203ENST00000424362 ZFYP08048 801 aaPredicted RBP20.22■□□□□ 0.83
BRPF1-203ENST00000424362 RDXP35241 583 aaKnown RBP20.22■□□□□ 0.83
BRPF1-203ENST00000424362 TTF1Q15361 905 aaPredicted RBP20.22■□□□□ 0.83
BRPF1-203ENST00000424362 ZNF397Q8NF99 534 aaPredicted RBP20.22■□□□□ 0.83
BRPF1-203ENST00000424362 ERLIN2O94905 339 aa20.22■□□□□ 0.83
BRPF1-203ENST00000424362 RAB11FIP4Q86YS3 637 aa20.22■□□□□ 0.83
BRPF1-203ENST00000424362 MAP3K19Q56UN5 1328 aa20.22■□□□□ 0.83
BRPF1-203ENST00000424362 PTGS1P23219 599 aa20.22■□□□□ 0.83
BRPF1-203ENST00000424362 MAP3K5Q99683 1374 aa20.22■□□□□ 0.83
BRPF1-203ENST00000424362 MAP9Q49MG5 647 aa20.21■□□□□ 0.83
BRPF1-203ENST00000424362 KRT222Q8N1A0 295 aa20.21■□□□□ 0.83
BRPF1-203ENST00000424362 TRMT112Q9UI30 125 aaKnown RBP20.21■□□□□ 0.83
BRPF1-203ENST00000424362 SSBP05455 408 aaKnown RBP eCLIP20.21■□□□□ 0.83
BRPF1-203ENST00000424362 SLC5A1P13866 664 aa20.21■□□□□ 0.83
BRPF1-203ENST00000424362 ODF2Q5BJF6 829 aa20.21■□□□□ 0.83
BRPF1-203ENST00000424362 UBASH3AP57075 661 aa20.21■□□□□ 0.83
BRPF1-203ENST00000424362 GNG11P61952 73 aa20.21■□□□□ 0.83
BRPF1-203ENST00000424362 AOPEPQ8N6M6 819 aa20.21■□□□□ 0.83
BRPF1-203ENST00000424362 KANK3Q6NY19 840 aa20.21■□□□□ 0.83
BRPF1-203ENST00000424362 AOX1Q06278 1338 aa20.2■□□□□ 0.82
BRPF1-203ENST00000424362 CPA1P15085 419 aa20.2■□□□□ 0.82
BRPF1-203ENST00000424362 ATP2B2Q01814 1243 aa20.2■□□□□ 0.82
BRPF1-203ENST00000424362 SPA17Q15506 151 aa20.2■□□□□ 0.82
BRPF1-203ENST00000424362 LMBR1LQ6UX01 489 aa20.2■□□□□ 0.82
BRPF1-203ENST00000424362 NCKAP5LQ9HCH0 1330 aa20.2■□□□□ 0.82
BRPF1-203ENST00000424362 KRT28Q7Z3Y7 464 aa20.19■□□□□ 0.82
BRPF1-203ENST00000424362 EDC4Q6P2E9 1401 aaKnown RBP20.19■□□□□ 0.82
BRPF1-203ENST00000424362 ABCC4O15439 1325 aa20.19■□□□□ 0.82
BRPF1-203ENST00000424362 RANBP6O60518 1105 aaKnown RBP20.19■□□□□ 0.82
BRPF1-203ENST00000424362 CCDC144CPQ8IYA2 1237 aa20.19■□□□□ 0.82
BRPF1-203ENST00000424362 CWF19L2Q2TBE0 894 aaKnown RBP20.19■□□□□ 0.82
BRPF1-203ENST00000424362 SGSM2O43147 1006 aa20.19■□□□□ 0.82
BRPF1-203ENST00000424362 NUP88Q99567 741 aaPredicted RBP20.19■□□□□ 0.82
BRPF1-203ENST00000424362 KIF24Q5T7B8 1368 aa20.19■□□□□ 0.82
BRPF1-203ENST00000424362 MCM3P25205 808 aa20.18■□□□□ 0.82
BRPF1-203ENST00000424362 YEATS4O95619 227 aa20.18■□□□□ 0.82
BRPF1-203ENST00000424362 LUZP1Q86V48 1076 aa20.18■□□□□ 0.82
BRPF1-203ENST00000424362 SLC26A6Q9BXS9 759 aa20.18■□□□□ 0.82
BRPF1-203ENST00000424362 IL15P40933 162 aaPredicted RBP20.18■□□□□ 0.82
BRPF1-203ENST00000424362 ZFYVE27Q5T4F4 411 aa20.18■□□□□ 0.82
BRPF1-203ENST00000424362 POTEB2H3BUK9 544 aa20.18■□□□□ 0.82
BRPF1-203ENST00000424362 SYCP1Q15431 976 aa20.18■□□□□ 0.82
BRPF1-203ENST00000424362 CAVIN4Q5BKX8 364 aa20.18■□□□□ 0.82
BRPF1-203ENST00000424362 FKBP15Q5T1M5 1219 aa20.17■□□□□ 0.82
BRPF1-203ENST00000424362 ALG1Q9BT22 464 aa20.17■□□□□ 0.82
BRPF1-203ENST00000424362 TERF1P54274 439 aa20.17■□□□□ 0.82
BRPF1-203ENST00000424362 CCDC94Q9BW85 323 aaPredicted RBP20.17■□□□□ 0.82
BRPF1-203ENST00000424362 DNAI1Q9UI46 699 aa20.17■□□□□ 0.82
BRPF1-203ENST00000424362 SLU7O95391 586 aaKnown RBP20.17■□□□□ 0.82
BRPF1-203ENST00000424362 TUBB4AP04350 444 aa20.17■□□□□ 0.82
BRPF1-203ENST00000424362 GSPT1P15170 499 aaKnown RBP20.17■□□□□ 0.82
BRPF1-203ENST00000424362 SLC39A6Q13433 755 aa20.17■□□□□ 0.82
BRPF1-203ENST00000424362 SNX14Q9Y5W7 946 aa20.17■□□□□ 0.82
BRPF1-203ENST00000424362 GPTP24298 496 aa20.17■□□□□ 0.82
BRPF1-203ENST00000424362 CATIPQ7Z7H3 387 aa20.17■□□□□ 0.82
BRPF1-203ENST00000424362 TMX1Q9H3N1 280 aa20.17■□□□□ 0.82
BRPF1-203ENST00000424362 CENPHQ9H3R5 247 aa20.17■□□□□ 0.82
BRPF1-203ENST00000424362 SPTLC2O15270 562 aa20.16■□□□□ 0.82
BRPF1-203ENST00000424362 CCDC191Q8NCU4 936 aa20.16■□□□□ 0.82
BRPF1-203ENST00000424362 BABAM1Q9NWV8 329 aa20.16■□□□□ 0.82
BRPF1-203ENST00000424362 TMEM63CQ9P1W3 806 aa20.16■□□□□ 0.82
BRPF1-203ENST00000424362 ZBTB43O43298 467 aa20.16■□□□□ 0.82
BRPF1-203ENST00000424362 BRD1O95696 1058 aa20.16■□□□□ 0.82
BRPF1-203ENST00000424362 DHX32Q7L7V1 743 aaKnown RBP20.16■□□□□ 0.82
BRPF1-203ENST00000424362 CCDC12Q8WUD4 166 aaPredicted RBP20.16■□□□□ 0.82
BRPF1-203ENST00000424362 TAF4BQ92750 862 aa20.16■□□□□ 0.82
BRPF1-203ENST00000424362 MFSD6Q6ZSS7 791 aa20.15■□□□□ 0.82
BRPF1-203ENST00000424362 KDM5AP29375 1690 aaKnown RBP20.15■□□□□ 0.82
BRPF1-203ENST00000424362 PNMA6EA0A0J9YXQ4 647 aa20.15■□□□□ 0.82
BRPF1-203ENST00000424362 GTF2F1P35269 517 aaKnown RBP eCLIP20.15■□□□□ 0.82
BRPF1-203ENST00000424362 NLRP5P59047 1200 aa20.15■□□□□ 0.82
BRPF1-203ENST00000424362 RTL1A6NKG5 1358 aa20.14■□□□□ 0.82
BRPF1-203ENST00000424362 PTPDC1A2A3K4 754 aa20.14■□□□□ 0.82
BRPF1-203ENST00000424362 TEX13AQ9BXU3 409 aaPredicted RBP20.14■□□□□ 0.82
BRPF1-203ENST00000424362 PAG1Q9NWQ8 432 aa20.14■□□□□ 0.82
BRPF1-203ENST00000424362 ABCA8O94911 1581 aa20.14■□□□□ 0.82
BRPF1-203ENST00000424362 LMOD1P29536 600 aaPredicted RBP20.14■□□□□ 0.81
BRPF1-203ENST00000424362 CCDC194A0A1B0GVG4 234 aa20.14■□□□□ 0.81
BRPF1-203ENST00000424362 USP8P40818 1118 aa20.14■□□□□ 0.81
BRPF1-203ENST00000424362 ZNF287Q9HBT7 754 aa20.14■□□□□ 0.81
BRPF1-203ENST00000424362 MKNK2Q9HBH9 465 aa20.13■□□□□ 0.81
BRPF1-203ENST00000424362 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.13■□□□□ 0.81
BRPF1-203ENST00000424362 PPP1R9BQ96SB3 815 aa20.13■□□□□ 0.81
BRPF1-203ENST00000424362 PYM1Q9BRP8 204 aaKnown RBP20.13■□□□□ 0.81
BRPF1-203ENST00000424362 ZNF652Q9Y2D9 606 aa20.13■□□□□ 0.81
BRPF1-203ENST00000424362 MARCKSP29966 332 aaPredicted RBP20.13■□□□□ 0.81
BRPF1-203ENST00000424362 KDM5DQ9BY66 1539 aa20.13■□□□□ 0.81
BRPF1-203ENST00000424362 KIAA0232Q92628 1395 aa20.12■□□□□ 0.81
BRPF1-203ENST00000424362 PRC1O43663 620 aa20.12■□□□□ 0.81
BRPF1-203ENST00000424362 USO1O60763 962 aaKnown RBP20.12■□□□□ 0.81
BRPF1-203ENST00000424362 UQCRFS1P1P0C7P4 283 aa20.12■□□□□ 0.81
BRPF1-203ENST00000424362 APOBRQ0VD83 1088 aa20.12■□□□□ 0.81
BRPF1-203ENST00000424362 ATL3Q6DD88 541 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms