RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 DIEXFQ68CQ4 756 aaKnown RBP19.57■□□□□ 0.72
USB1-202ENST00000423271 GPC2Q8N158 579 aa19.57■□□□□ 0.72
USB1-202ENST00000423271 CELF1Q92879 486 aaKnown RBP19.57■□□□□ 0.72
USB1-202ENST00000423271 HACL1Q9UJ83 578 aa19.57■□□□□ 0.72
USB1-202ENST00000423271 GJA3Q9Y6H8 435 aa19.57■□□□□ 0.72
USB1-202ENST00000423271 FANCIQ9NVI1 1328 aa19.56■□□□□ 0.72
USB1-202ENST00000423271 EIF6P56537 245 aaKnown RBP19.56■□□□□ 0.72
USB1-202ENST00000423271 TWISTNBQ3B726 338 aaPredicted RBP19.56■□□□□ 0.72
USB1-202ENST00000423271 DPP8Q6V1X1 898 aaPredicted RBP19.56■□□□□ 0.72
USB1-202ENST00000423271 NIM1KQ8IY84 436 aa19.56■□□□□ 0.72
USB1-202ENST00000423271 KLRG1Q96E93 195 aa19.56■□□□□ 0.72
USB1-202ENST00000423271 RTFDC1Q9BY42 306 aaPredicted RBP19.56■□□□□ 0.72
USB1-202ENST00000423271 ADAMTSL1Q8N6G6 1762 aa19.56■□□□□ 0.72
USB1-202ENST00000423271 DDX58O95786 925 aaKnown RBP19.55■□□□□ 0.72
USB1-202ENST00000423271 EPHX2P34913 555 aa19.55■□□□□ 0.72
USB1-202ENST00000423271 EAPPQ56P03 285 aaPredicted RBP19.55■□□□□ 0.72
USB1-202ENST00000423271 LDHDQ86WU2 507 aa19.55■□□□□ 0.72
USB1-202ENST00000423271 MPNDQ8N594 471 aa19.55■□□□□ 0.72
USB1-202ENST00000423271 ZBTB38Q8NAP3 1195 aaPredicted RBP19.55■□□□□ 0.72
USB1-202ENST00000423271 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
USB1-202ENST00000423271 METTL22Q9BUU2 404 aaPredicted RBP19.55■□□□□ 0.72
USB1-202ENST00000423271 MAP3K2Q9Y2U5 619 aa19.55■□□□□ 0.72
USB1-202ENST00000423271 PCNTO95613 3336 aa19.54■□□□□ 0.72
USB1-202ENST00000423271 G2E3Q7L622 706 aa19.54■□□□□ 0.72
USB1-202ENST00000423271 CCDC191Q8NCU4 936 aa19.54■□□□□ 0.72
USB1-202ENST00000423271 SUPT20HQ8NEM7 779 aa19.54■□□□□ 0.72
USB1-202ENST00000423271 STK31Q9BXU1 1019 aa19.54■□□□□ 0.72
USB1-202ENST00000423271 CHMP4AQ9BY43 222 aa19.54■□□□□ 0.72
USB1-202ENST00000423271 PI4KAP2A4QPH2 592 aa19.53■□□□□ 0.72
USB1-202ENST00000423271 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
USB1-202ENST00000423271 PI4KAP1Q8N8J0 262 aa19.53■□□□□ 0.72
USB1-202ENST00000423271 CWC25Q9NXE8 425 aaPredicted RBP19.53■□□□□ 0.72
USB1-202ENST00000423271 PCCAP05165 728 aaPredicted RBP19.52■□□□□ 0.72
USB1-202ENST00000423271 SCNN1DP51172 638 aa19.52■□□□□ 0.72
USB1-202ENST00000423271 KIAA2012Q0VF49 1180 aa19.52■□□□□ 0.72
USB1-202ENST00000423271 KSR2Q6VAB6 950 aa19.52■□□□□ 0.72
USB1-202ENST00000423271 TMC4Q7Z404 712 aa19.52■□□□□ 0.72
USB1-202ENST00000423271 VPS33BQ9H267 617 aa19.52■□□□□ 0.72
USB1-202ENST00000423271 IGKV5-2P06315 115 aa19.51■□□□□ 0.71
USB1-202ENST00000423271 WDR63Q8IWG1 891 aa19.51■□□□□ 0.71
USB1-202ENST00000423271 SPINK5Q9NQ38 1064 aaPredicted RBP19.51■□□□□ 0.71
USB1-202ENST00000423271 SEC31BQ9NQW1 1179 aa19.51■□□□□ 0.71
USB1-202ENST00000423271 SLC4A2P04920 1241 aa19.5■□□□□ 0.71
USB1-202ENST00000423271 CXCL9Q07325 125 aa19.5■□□□□ 0.71
USB1-202ENST00000423271 ZNRF3Q9ULT6 936 aa19.5■□□□□ 0.71
USB1-202ENST00000423271 CLEC11AQ9Y240 323 aa19.5■□□□□ 0.71
USB1-202ENST00000423271 PASKQ96RG2 1323 aa19.5■□□□□ 0.71
USB1-202ENST00000423271 LMOD1P29536 600 aaPredicted RBP19.49■□□□□ 0.71
USB1-202ENST00000423271 EPS15P42566 896 aa19.49■□□□□ 0.71
USB1-202ENST00000423271 GPSM2P81274 684 aa19.49■□□□□ 0.71
USB1-202ENST00000423271 EXOSC9Q06265 439 aaKnown RBP19.49■□□□□ 0.71
USB1-202ENST00000423271 CWF19L2Q2TBE0 894 aaKnown RBP19.49■□□□□ 0.71
USB1-202ENST00000423271 PNMA8AQ86V59 439 aaPredicted RBP19.49■□□□□ 0.71
USB1-202ENST00000423271 JMYQ8N9B5 988 aa19.49■□□□□ 0.71
USB1-202ENST00000423271 CCDC85AQ96PX6 553 aaPredicted RBP19.49■□□□□ 0.71
USB1-202ENST00000423271 PDE8AO60658 829 aa19.48■□□□□ 0.71
USB1-202ENST00000423271 ITGBL1O95965 494 aaPredicted RBP19.48■□□□□ 0.71
USB1-202ENST00000423271 RPS8P62241 208 aaKnown RBP19.48■□□□□ 0.71
USB1-202ENST00000423271 MAP1SQ66K74 1059 aaPredicted RBP19.48■□□□□ 0.71
USB1-202ENST00000423271 NSFL1CQ9UNZ2 370 aaKnown RBP19.48■□□□□ 0.71
USB1-202ENST00000423271 YDJCA8MPS7 323 aa19.47■□□□□ 0.71
USB1-202ENST00000423271 VAMP4O75379 141 aa19.47■□□□□ 0.71
USB1-202ENST00000423271 HSP90B1P14625 803 aaKnown RBP19.47■□□□□ 0.71
USB1-202ENST00000423271 FLIIQ13045 1269 aa19.47■□□□□ 0.71
USB1-202ENST00000423271 CCDC152Q4G0S7 254 aa19.47■□□□□ 0.71
USB1-202ENST00000423271 GPR101Q96P66 508 aaPredicted RBP19.47■□□□□ 0.71
USB1-202ENST00000423271 POLLQ9UGP5 575 aa19.47■□□□□ 0.71
USB1-202ENST00000423271 CDHR2Q9BYE9 1310 aa19.47■□□□□ 0.71
USB1-202ENST00000423271 NEURL1BA8MQ27 555 aa19.46■□□□□ 0.71
USB1-202ENST00000423271 RAD17O75943 681 aa19.46■□□□□ 0.71
USB1-202ENST00000423271 NEXNQ0ZGT2 675 aa19.46■□□□□ 0.71
USB1-202ENST00000423271 CREBZFQ9NS37 354 aa19.46■□□□□ 0.71
USB1-202ENST00000423271 CACNA1FO60840 1977 aa19.46■□□□□ 0.71
USB1-202ENST00000423271 MYH3P11055 1940 aa19.45■□□□□ 0.7
USB1-202ENST00000423271 RIMBP2O15034 1052 aa19.45■□□□□ 0.7
USB1-202ENST00000423271 GMPSP49915 693 aaPredicted RBP19.45■□□□□ 0.7
USB1-202ENST00000423271 CIAPIN1Q6FI81 312 aa19.45■□□□□ 0.7
USB1-202ENST00000423271 GPRC5DQ9NZD1 345 aa19.45■□□□□ 0.7
USB1-202ENST00000423271 C6orf229H3BNL8 230 aa19.44■□□□□ 0.7
USB1-202ENST00000423271 CCER2I3L3R5 266 aa19.44■□□□□ 0.7
USB1-202ENST00000423271 CTSWP56202 376 aa19.44■□□□□ 0.7
USB1-202ENST00000423271 FKBP5Q13451 457 aaPredicted RBP19.44■□□□□ 0.7
USB1-202ENST00000423271 WASHC4Q2M389 1173 aa19.44■□□□□ 0.7
USB1-202ENST00000423271 MIER1Q8N108 512 aa19.44■□□□□ 0.7
USB1-202ENST00000423271 CNTROBQ8N137 903 aa19.44■□□□□ 0.7
USB1-202ENST00000423271 TBC1D16Q8TBP0 767 aa19.44■□□□□ 0.7
USB1-202ENST00000423271 DBNDD1Q9H9R9 158 aa19.44■□□□□ 0.7
USB1-202ENST00000423271 MKRN1Q9UHC7 482 aaKnown RBP19.43■□□□□ 0.7
USB1-202ENST00000423271 SPEF2Q9C093 1822 aa19.43■□□□□ 0.7
USB1-202ENST00000423271 USP50Q70EL3 339 aaPredicted RBP19.42■□□□□ 0.7
USB1-202ENST00000423271 UBE3BQ7Z3V4 1068 aa19.42■□□□□ 0.7
USB1-202ENST00000423271 TTLL11Q8NHH1 800 aa19.42■□□□□ 0.7
USB1-202ENST00000423271 DNAAF4Q8WXU2 420 aa19.42■□□□□ 0.7
USB1-202ENST00000423271 MYH16Q9H6N6 1097 aa19.42■□□□□ 0.7
USB1-202ENST00000423271 SHTN1A0MZ66 631 aa19.41■□□□□ 0.7
USB1-202ENST00000423271 H7C1W4 665 aa19.41■□□□□ 0.7
USB1-202ENST00000423271 UFL1O94874 794 aa19.41■□□□□ 0.7
USB1-202ENST00000423271 GCKRQ14397 625 aa19.41■□□□□ 0.7
USB1-202ENST00000423271 TNIP1Q15025 636 aa19.41■□□□□ 0.7
USB1-202ENST00000423271 DOK7Q18PE1 504 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms