RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 RNF20Q5VTR2 975 aa19.52■□□□□ 0.71
PKP4-204ENST00000421462 KINO60870 393 aaKnown RBP19.51■□□□□ 0.71
PKP4-204ENST00000421462 ME1P48163 572 aa19.51■□□□□ 0.71
PKP4-204ENST00000421462 CCDC73Q6ZRK6 1079 aa19.51■□□□□ 0.71
PKP4-204ENST00000421462 NYAP1Q6ZVC0 841 aa19.51■□□□□ 0.71
PKP4-204ENST00000421462 TMX1Q9H3N1 280 aa19.51■□□□□ 0.71
PKP4-204ENST00000421462 STX1AQ16623 288 aa19.51■□□□□ 0.71
PKP4-204ENST00000421462 MAP4K1Q92918 833 aa19.51■□□□□ 0.71
PKP4-204ENST00000421462 SDF4Q9BRK5 362 aa19.51■□□□□ 0.71
PKP4-204ENST00000421462 TTC41PQ6P2S7 1318 aa19.51■□□□□ 0.71
PKP4-204ENST00000421462 CCT2P78371 535 aaKnown RBP19.5■□□□□ 0.71
PKP4-204ENST00000421462 ARHGAP29Q52LW3 1261 aa19.5■□□□□ 0.71
PKP4-204ENST00000421462 TMC6Q7Z403 805 aa19.5■□□□□ 0.71
PKP4-204ENST00000421462 GOLPH3LQ9H4A5 285 aa19.5■□□□□ 0.71
PKP4-204ENST00000421462 ZRSR1Q15695 479 aaKnown RBP19.5■□□□□ 0.71
PKP4-204ENST00000421462 NGDNQ8NEJ9 315 aaKnown RBP19.5■□□□□ 0.71
PKP4-204ENST00000421462 CCDC129Q6ZRS4 1044 aa19.5■□□□□ 0.71
PKP4-204ENST00000421462 CHMP4AQ9BY43 222 aa19.5■□□□□ 0.71
PKP4-204ENST00000421462 AIMP1Q12904 312 aaKnown RBP19.49■□□□□ 0.71
PKP4-204ENST00000421462 Q6ZUG5 572 aa19.49■□□□□ 0.71
PKP4-204ENST00000421462 EAF2Q96CJ1 260 aaPredicted RBP19.49■□□□□ 0.71
PKP4-204ENST00000421462 ZFP91Q96JP5 570 aaPredicted RBP19.49■□□□□ 0.71
PKP4-204ENST00000421462 EPC1Q9H2F5 836 aa19.49■□□□□ 0.71
PKP4-204ENST00000421462 BEND3Q5T5X7 828 aa19.49■□□□□ 0.71
PKP4-204ENST00000421462 NEK11Q8NG66 645 aa19.49■□□□□ 0.71
PKP4-204ENST00000421462 CLCN6P51797 869 aa19.48■□□□□ 0.71
PKP4-204ENST00000421462 ANKRD1Q15327 319 aa19.48■□□□□ 0.71
PKP4-204ENST00000421462 FSIP1Q8NA03 581 aa19.48■□□□□ 0.71
PKP4-204ENST00000421462 MAP3K5Q99683 1374 aa19.48■□□□□ 0.71
PKP4-204ENST00000421462 HTATSF1O43719 755 aaKnown RBP19.48■□□□□ 0.71
PKP4-204ENST00000421462 RBM43Q6ZSC3 357 aaKnown RBP19.48■□□□□ 0.71
PKP4-204ENST00000421462 MRFAP1L1Q96HT8 127 aa19.48■□□□□ 0.71
PKP4-204ENST00000421462 SEC62Q99442 399 aaKnown RBP19.48■□□□□ 0.71
PKP4-204ENST00000421462 HNRNPH2P55795 449 aaKnown RBP19.48■□□□□ 0.71
PKP4-204ENST00000421462 RESTQ13127 1097 aa19.48■□□□□ 0.71
PKP4-204ENST00000421462 PLPPR3Q6T4P5 718 aa19.48■□□□□ 0.71
PKP4-204ENST00000421462 CFAP45Q9UL16 551 aa19.48■□□□□ 0.71
PKP4-204ENST00000421462 PREX1Q8TCU6 1659 aa19.47■□□□□ 0.71
PKP4-204ENST00000421462 NLRP6P59044 892 aa19.47■□□□□ 0.71
PKP4-204ENST00000421462 G3BP1Q13283 466 aaKnown RBP eCLIP19.47■□□□□ 0.71
PKP4-204ENST00000421462 BMS1Q14692 1282 aaKnown RBP19.47■□□□□ 0.71
PKP4-204ENST00000421462 DHX40Q8IX18 779 aaKnown RBP19.47■□□□□ 0.71
PKP4-204ENST00000421462 IFNKQ9P0W0 207 aa19.47■□□□□ 0.71
PKP4-204ENST00000421462 DNAI1Q9UI46 699 aa19.47■□□□□ 0.71
PKP4-204ENST00000421462 SEC31AO94979 1220 aaKnown RBP19.47■□□□□ 0.71
PKP4-204ENST00000421462 LGR6Q9HBX8 967 aa19.47■□□□□ 0.71
PKP4-204ENST00000421462 CALCOCO1Q9P1Z2 691 aa19.47■□□□□ 0.71
PKP4-204ENST00000421462 ERBB3P21860 1342 aa19.47■□□□□ 0.71
PKP4-204ENST00000421462 ARHGEF10O15013 1369 aa19.47■□□□□ 0.71
PKP4-204ENST00000421462 A0A1B0GVL5 298 aa19.46■□□□□ 0.71
PKP4-204ENST00000421462 CEP57L1Q8IYX8 460 aa19.46■□□□□ 0.71
PKP4-204ENST00000421462 USP28Q96RU2 1077 aa19.46■□□□□ 0.71
PKP4-204ENST00000421462 ZCCHC17Q9NP64 241 aaKnown RBP19.46■□□□□ 0.71
PKP4-204ENST00000421462 MAP3K2Q9Y2U5 619 aa19.46■□□□□ 0.71
PKP4-204ENST00000421462 NEMFO60524 1076 aa19.46■□□□□ 0.71
PKP4-204ENST00000421462 TRIM34Q9BYJ4 488 aa19.46■□□□□ 0.71
PKP4-204ENST00000421462 NCOA5Q9HCD5 579 aaKnown RBP19.46■□□□□ 0.71
PKP4-204ENST00000421462 E4F1Q66K89 784 aaPredicted RBP19.45■□□□□ 0.7
PKP4-204ENST00000421462 CDC25BP30305 580 aa19.45■□□□□ 0.7
PKP4-204ENST00000421462 GOLGA8FQ08AF8 430 aa19.45■□□□□ 0.7
PKP4-204ENST00000421462 GOLGA8DPQ0D2H9 430 aa19.45■□□□□ 0.7
PKP4-204ENST00000421462 CHST3Q7LGC8 479 aa19.45■□□□□ 0.7
PKP4-204ENST00000421462 XPO4Q9C0E2 1151 aaKnown RBP19.45■□□□□ 0.7
PKP4-204ENST00000421462 ANO10Q9NW15 660 aa19.45■□□□□ 0.7
PKP4-204ENST00000421462 TEFQ10587 303 aa19.45■□□□□ 0.7
PKP4-204ENST00000421462 PPP1R13BQ96KQ4 1090 aa19.45■□□□□ 0.7
PKP4-204ENST00000421462 DNAJC2Q99543 621 aaKnown RBP19.45■□□□□ 0.7
PKP4-204ENST00000421462 URI1O94763 535 aaPredicted RBP19.44■□□□□ 0.7
PKP4-204ENST00000421462 UBXN4Q92575 508 aa19.44■□□□□ 0.7
PKP4-204ENST00000421462 NEK1Q96PY6 1258 aa19.44■□□□□ 0.7
PKP4-204ENST00000421462 CAPN2P17655 700 aa19.44■□□□□ 0.7
PKP4-204ENST00000421462 SFPQP23246 707 aaKnown RBP eCLIP19.44■□□□□ 0.76e-7■□□□□ 10.9
PKP4-204ENST00000421462 GNL2Q13823 731 aaKnown RBP19.44■□□□□ 0.7
PKP4-204ENST00000421462 DLC1Q96QB1 1528 aa19.44■□□□□ 0.7
PKP4-204ENST00000421462 CEP170BQ9Y4F5 1589 aaPredicted RBP19.43■□□□□ 0.7
PKP4-204ENST00000421462 MNS1Q8NEH6 495 aa19.43■□□□□ 0.7
PKP4-204ENST00000421462 CCDC34Q96HJ3 373 aa19.43■□□□□ 0.7
PKP4-204ENST00000421462 SASH1O94885 1247 aa19.43■□□□□ 0.7
PKP4-204ENST00000421462 PNMA6AP0CW24 399 aaPredicted RBP19.43■□□□□ 0.7
PKP4-204ENST00000421462 LMOD1P29536 600 aaPredicted RBP19.43■□□□□ 0.7
PKP4-204ENST00000421462 OTUD7BQ6GQQ9 843 aa19.43■□□□□ 0.7
PKP4-204ENST00000421462 SARM1Q6SZW1 724 aa19.43■□□□□ 0.7
PKP4-204ENST00000421462 SCRN1Q12765 414 aa19.43■□□□□ 0.7
PKP4-204ENST00000421462 SF3A1Q15459 793 aaKnown RBP19.43■□□□□ 0.7
PKP4-204ENST00000421462 DPCR1Q3MIW9 517 aa19.43■□□□□ 0.7
PKP4-204ENST00000421462 SLFNL1Q499Z3 407 aa19.43■□□□□ 0.7
PKP4-204ENST00000421462 FHOD1Q9Y613 1164 aa19.43■□□□□ 0.7
PKP4-204ENST00000421462 APOBRQ0VD83 1088 aa19.42■□□□□ 0.7
PKP4-204ENST00000421462 PROSER3Q2NL68 480 aa19.42■□□□□ 0.7
PKP4-204ENST00000421462 HSP90AA4PQ58FG1 418 aa19.42■□□□□ 0.7
PKP4-204ENST00000421462 GYS2P54840 703 aa19.42■□□□□ 0.7
PKP4-204ENST00000421462 ARMCX5Q6P1M9 558 aa19.42■□□□□ 0.7
PKP4-204ENST00000421462 TMCO3Q6UWJ1 677 aa19.42■□□□□ 0.7
PKP4-204ENST00000421462 NBPF11Q86T75 865 aa19.42■□□□□ 0.7
PKP4-204ENST00000421462 KCNB2Q92953 911 aa19.41■□□□□ 0.7
PKP4-204ENST00000421462 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.41■□□□□ 0.73e-6■■□□□ 12.5
PKP4-204ENST00000421462 FLT4P35916 1363 aa19.41■□□□□ 0.7
PKP4-204ENST00000421462 SETD1BQ9UPS6 1966 aaKnown RBP19.41■□□□□ 0.7
PKP4-204ENST00000421462 POLR3DP05423 398 aaPredicted RBP19.41■□□□□ 0.7
PKP4-204ENST00000421462 SLC26A8Q96RN1 970 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms