RNA–Protein interactions for RNA: ENST00000420588.5

SCAP-205, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-205ENST00000420588 TMX4Q9H1E5 349 aaPredicted RBP17.38■□□□□ 0.37
SCAP-205ENST00000420588 GRIN3BO60391 1043 aa17.37■□□□□ 0.37
SCAP-205ENST00000420588 GNAI3P08754 354 aa17.37■□□□□ 0.37
SCAP-205ENST00000420588 PRPF40BQ6NWY9 871 aaKnown RBP17.37■□□□□ 0.37
SCAP-205ENST00000420588 TTLL11Q8NHH1 800 aa17.37■□□□□ 0.37
SCAP-205ENST00000420588 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
SCAP-205ENST00000420588 CHMP3Q9Y3E7 222 aa17.37■□□□□ 0.37
SCAP-205ENST00000420588 UTYO14607 1347 aa17.37■□□□□ 0.37
SCAP-205ENST00000420588 YBX3P16989 372 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCAP-205ENST00000420588 SUCLG2Q96I99 432 aa17.36■□□□□ 0.37
SCAP-205ENST00000420588 TNRC6CQ9HCJ0 1690 aaKnown RBP17.36■□□□□ 0.37
SCAP-205ENST00000420588 C21orf2O43822 256 aa17.35■□□□□ 0.37
SCAP-205ENST00000420588 BBOX1O75936 387 aa17.35■□□□□ 0.37
SCAP-205ENST00000420588 RLBP1P12271 317 aa17.35■□□□□ 0.37
SCAP-205ENST00000420588 FOXO4P98177 505 aa17.35■□□□□ 0.37
SCAP-205ENST00000420588 GRAPQ13588 217 aa17.35■□□□□ 0.37
SCAP-205ENST00000420588 LMBR1LQ6UX01 489 aa17.35■□□□□ 0.37
SCAP-205ENST00000420588 GRAPLQ8TC17 118 aaPredicted RBP17.35■□□□□ 0.37
SCAP-205ENST00000420588 KIAA1551Q9HCM1 1747 aa17.35■□□□□ 0.37
SCAP-205ENST00000420588 PPEF1O14829 653 aaPredicted RBP17.34■□□□□ 0.37
SCAP-205ENST00000420588 CSF1RP07333 972 aa17.34■□□□□ 0.37
SCAP-205ENST00000420588 PDE3AQ14432 1141 aa17.34■□□□□ 0.37
SCAP-205ENST00000420588 EPHA10Q5JZY3 1008 aa17.34■□□□□ 0.37
SCAP-205ENST00000420588 ARHGAP27Q6ZUM4 889 aa17.34■□□□□ 0.37
SCAP-205ENST00000420588 CDC5LQ99459 802 aaKnown RBP17.34■□□□□ 0.37
SCAP-205ENST00000420588 MEIS3Q99687 375 aa17.34■□□□□ 0.37
SCAP-205ENST00000420588 GREM2Q9H772 168 aa17.34■□□□□ 0.37
SCAP-205ENST00000420588 SEC31BQ9NQW1 1179 aa17.34■□□□□ 0.37
SCAP-205ENST00000420588 DDX60Q8IY21 1712 aaKnown RBP17.33■□□□□ 0.37
SCAP-205ENST00000420588 ANKRD18BA2A2Z9 1011 aa17.33■□□□□ 0.36
SCAP-205ENST00000420588 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.36
SCAP-205ENST00000420588 RPS8P62241 208 aaKnown RBP17.33■□□□□ 0.36
SCAP-205ENST00000420588 IFIT5Q13325 482 aaKnown RBP17.33■□□□□ 0.36
SCAP-205ENST00000420588 CCDC57Q2TAC2 916 aa17.33■□□□□ 0.36
SCAP-205ENST00000420588 SOGA3Q5TF21 947 aa17.33■□□□□ 0.36
SCAP-205ENST00000420588 ANKRD18AQ8IVF6 992 aa17.33■□□□□ 0.36
SCAP-205ENST00000420588 BICC1Q9H694 974 aaKnown RBP17.33■□□□□ 0.36
SCAP-205ENST00000420588 COL11A2P13942 1736 aaPredicted RBP17.33■□□□□ 0.36
SCAP-205ENST00000420588 ITGA6P23229 1130 aa17.32■□□□□ 0.36
SCAP-205ENST00000420588 TAF7LQ5H9L4 462 aa17.32■□□□□ 0.36
SCAP-205ENST00000420588 TMC4Q7Z404 712 aa17.32■□□□□ 0.36
SCAP-205ENST00000420588 CELF1Q92879 486 aaKnown RBP17.32■□□□□ 0.36
SCAP-205ENST00000420588 CHMP4BQ9H444 224 aaKnown RBP17.32■□□□□ 0.36
SCAP-205ENST00000420588 COG6Q9Y2V7 657 aa17.32■□□□□ 0.36
SCAP-205ENST00000420588 GNAI2P04899 355 aa17.31■□□□□ 0.36
SCAP-205ENST00000420588 IGHMBP2P38935 993 aaKnown RBP17.31■□□□□ 0.36
SCAP-205ENST00000420588 MVPQ14764 893 aaKnown RBP17.31■□□□□ 0.36
SCAP-205ENST00000420588 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
SCAP-205ENST00000420588 CC2D2BQ6DHV5 1058 aa17.31■□□□□ 0.36
SCAP-205ENST00000420588 KAZALD1Q96I82 304 aa17.31■□□□□ 0.36
SCAP-205ENST00000420588 DDX19BQ9UMR2 479 aa17.31■□□□□ 0.36
SCAP-205ENST00000420588 LRRFIP2Q9Y608 721 aaKnown RBP17.31■□□□□ 0.36
SCAP-205ENST00000420588 DLEC1Q9Y238 1755 aa17.3■□□□□ 0.36
SCAP-205ENST00000420588 ZBTB7BO15156 539 aaPredicted RBP17.3■□□□□ 0.36
SCAP-205ENST00000420588 CCDC93Q567U6 631 aa17.3■□□□□ 0.36
SCAP-205ENST00000420588 C20orf194Q5TEA3 1177 aa17.3■□□□□ 0.36
SCAP-205ENST00000420588 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
SCAP-205ENST00000420588 C7orf43Q8WVR3 580 aa17.3■□□□□ 0.36
SCAP-205ENST00000420588 MPHOSPH8Q99549 860 aa17.3■□□□□ 0.36
SCAP-205ENST00000420588 ATP6V0A2Q9Y487 856 aa17.3■□□□□ 0.36
SCAP-205ENST00000420588 LAMB2P55268 1798 aa17.3■□□□□ 0.36
SCAP-205ENST00000420588 RTL9Q8NET4 1388 aa17.29■□□□□ 0.36
SCAP-205ENST00000420588 SLX4Q8IY92 1834 aa17.29■□□□□ 0.36
SCAP-205ENST00000420588 RTKN2Q8IZC4 609 aa17.29■□□□□ 0.36
SCAP-205ENST00000420588 SUPT16HQ9Y5B9 1047 aaKnown RBP17.29■□□□□ 0.36
SCAP-205ENST00000420588 BRCA1P38398 1863 aaKnown RBP17.29■□□□□ 0.36
SCAP-205ENST00000420588 RABL6Q3YEC7 729 aaPredicted RBP17.28■□□□□ 0.36
SCAP-205ENST00000420588 GRIPAP1Q4V328 841 aa17.28■□□□□ 0.36
SCAP-205ENST00000420588 OLFM4Q6UX06 510 aa17.28■□□□□ 0.36
SCAP-205ENST00000420588 ANKRD44Q8N8A2 993 aa17.28■□□□□ 0.36
SCAP-205ENST00000420588 MYH3P11055 1940 aa17.27■□□□□ 0.36
SCAP-205ENST00000420588 BSDC1Q9NW68 430 aaPredicted RBP17.27■□□□□ 0.36
SCAP-205ENST00000420588 CACNA1SQ13698 1873 aa17.27■□□□□ 0.35
SCAP-205ENST00000420588 MPNDQ8N594 471 aa17.26■□□□□ 0.35
SCAP-205ENST00000420588 ZNF594Q96JF6 807 aaPredicted RBP17.26■□□□□ 0.35
SCAP-205ENST00000420588 DPP8Q6V1X1 898 aaPredicted RBP17.25■□□□□ 0.35
SCAP-205ENST00000420588 LDHAL6AQ6ZMR3 332 aa17.25■□□□□ 0.35
SCAP-205ENST00000420588 TAOK3Q9H2K8 898 aa17.25■□□□□ 0.35
SCAP-205ENST00000420588 C1orf115Q9H7X2 142 aa17.25■□□□□ 0.35
SCAP-205ENST00000420588 CNNM1Q9NRU3 951 aa17.25■□□□□ 0.35
SCAP-205ENST00000420588 ANKIB1Q9P2G1 1089 aa17.25■□□□□ 0.35
SCAP-205ENST00000420588 NSFL1CQ9UNZ2 370 aaKnown RBP17.25■□□□□ 0.35
SCAP-205ENST00000420588 TAF1P21675 1872 aa17.24■□□□□ 0.35
SCAP-205ENST00000420588 ARFGEF1Q9Y6D6 1849 aa17.24■□□□□ 0.35
SCAP-205ENST00000420588 FKBP4Q02790 459 aaKnown RBP eCLIP17.24■□□□□ 0.35
SCAP-205ENST00000420588 RASSF7Q02833 373 aa17.24■□□□□ 0.35
SCAP-205ENST00000420588 SRGAP3O43295 1099 aa17.23■□□□□ 0.35
SCAP-205ENST00000420588 GPSM2P81274 684 aa17.23■□□□□ 0.35
SCAP-205ENST00000420588 SUPT20HQ8NEM7 779 aa17.23■□□□□ 0.35
SCAP-205ENST00000420588 MINPP1Q9UNW1 487 aa17.23■□□□□ 0.35
SCAP-205ENST00000420588 C6orf229H3BNL8 230 aa17.22■□□□□ 0.35
SCAP-205ENST00000420588 NFKBIEO00221 500 aa17.22■□□□□ 0.35
SCAP-205ENST00000420588 CENPBP07199 599 aaPredicted RBP17.22■□□□□ 0.35
SCAP-205ENST00000420588 ATP8B2P98198 1209 aa17.22■□□□□ 0.35
SCAP-205ENST00000420588 SLC51AQ86UW1 340 aa17.22■□□□□ 0.35
SCAP-205ENST00000420588 PSMD1Q99460 953 aa17.22■□□□□ 0.35
SCAP-205ENST00000420588 ANKRD2Q9GZV1 360 aa17.22■□□□□ 0.35
SCAP-205ENST00000420588 LMNB1P20700 586 aa17.21■□□□□ 0.35
SCAP-205ENST00000420588 KLHDC4Q8TBB5 520 aa17.21■□□□□ 0.35
SCAP-205ENST00000420588 ZNF277Q9NRM2 450 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms