RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 SF3B3Q15393 1217 aaKnown RBP14.28□□□□□ -0.12
SSBP3-206ENST00000420121 SP8Q8IXZ3 490 aa14.28□□□□□ -0.12
SSBP3-206ENST00000420121 GRAPLQ8TC17 118 aaPredicted RBP14.28□□□□□ -0.12
SSBP3-206ENST00000420121 PCNTO95613 3336 aa14.28□□□□□ -0.12
SSBP3-206ENST00000420121 CCDC30Q5VVM6 783 aa14.27□□□□□ -0.13
SSBP3-206ENST00000420121 CHADLQ6NUI6 762 aa14.27□□□□□ -0.13
SSBP3-206ENST00000420121 DDX46Q7L014 1031 aaKnown RBP14.27□□□□□ -0.13
SSBP3-206ENST00000420121 RIC3Q7Z5B4 369 aa14.27□□□□□ -0.13
SSBP3-206ENST00000420121 GPC2Q8N158 579 aa14.27□□□□□ -0.13
SSBP3-206ENST00000420121 KLRG1Q96E93 195 aa14.27□□□□□ -0.13
SSBP3-206ENST00000420121 IQCA1LA6NCM1 817 aa14.26□□□□□ -0.13
SSBP3-206ENST00000420121 GOLGA2Q08379 1002 aa14.26□□□□□ -0.13
SSBP3-206ENST00000420121 AOC3Q16853 763 aa14.26□□□□□ -0.13
SSBP3-206ENST00000420121 RTL5Q5HYW3 569 aaPredicted RBP14.26□□□□□ -0.13
SSBP3-206ENST00000420121 LARGE2Q8N3Y3 721 aa14.26□□□□□ -0.13
SSBP3-206ENST00000420121 JDP2Q8WYK2 163 aa14.26□□□□□ -0.13
SSBP3-206ENST00000420121 CELF1Q92879 486 aaKnown RBP14.26□□□□□ -0.13
SSBP3-206ENST00000420121 MYD88Q99836 296 aa14.26□□□□□ -0.13
SSBP3-206ENST00000420121 FANCIQ9NVI1 1328 aa14.25□□□□□ -0.13
SSBP3-206ENST00000420121 IRS4O14654 1257 aaPredicted RBP14.25□□□□□ -0.13
SSBP3-206ENST00000420121 TWISTNBQ3B726 338 aaPredicted RBP14.25□□□□□ -0.13
SSBP3-206ENST00000420121 G2E3Q7L622 706 aa14.25□□□□□ -0.13
SSBP3-206ENST00000420121 JMYQ8N9B5 988 aa14.25□□□□□ -0.13
SSBP3-206ENST00000420121 ZBTB38Q8NAP3 1195 aaPredicted RBP14.25□□□□□ -0.13
SSBP3-206ENST00000420121 METTL22Q9BUU2 404 aaPredicted RBP14.25□□□□□ -0.13
SSBP3-206ENST00000420121 HACL1Q9UJ83 578 aa14.25□□□□□ -0.13
SSBP3-206ENST00000420121 SPEF2Q9C093 1822 aa14.25□□□□□ -0.13
SSBP3-206ENST00000420121 PASKQ96RG2 1323 aa14.24□□□□□ -0.13
SSBP3-206ENST00000420121 PPIP5K2O43314 1243 aa14.24□□□□□ -0.13
SSBP3-206ENST00000420121 IGKV5-2P06315 115 aa14.24□□□□□ -0.13
SSBP3-206ENST00000420121 EPHX2P34913 555 aa14.24□□□□□ -0.13
SSBP3-206ENST00000420121 SCNN1DP51172 638 aa14.24□□□□□ -0.13
SSBP3-206ENST00000420121 LDHDQ86WU2 507 aa14.24□□□□□ -0.13
SSBP3-206ENST00000420121 MPNDQ8N594 471 aa14.24□□□□□ -0.13
SSBP3-206ENST00000420121 CCDC191Q8NCU4 936 aa14.24□□□□□ -0.13
SSBP3-206ENST00000420121 VPS33BQ9H267 617 aa14.24□□□□□ -0.13
SSBP3-206ENST00000420121 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
SSBP3-206ENST00000420121 ITGBL1O95965 494 aaPredicted RBP14.23□□□□□ -0.13
SSBP3-206ENST00000420121 PCCAP05165 728 aaPredicted RBP14.23□□□□□ -0.13
SSBP3-206ENST00000420121 EIF6P56537 245 aaKnown RBP14.23□□□□□ -0.13
SSBP3-206ENST00000420121 KIAA2012Q0VF49 1180 aa14.23□□□□□ -0.13
SSBP3-206ENST00000420121 DPP8Q6V1X1 898 aaPredicted RBP14.23□□□□□ -0.13
SSBP3-206ENST00000420121 KSR2Q6VAB6 950 aa14.23□□□□□ -0.13
SSBP3-206ENST00000420121 TMC4Q7Z404 712 aa14.23□□□□□ -0.13
SSBP3-206ENST00000420121 NIM1KQ8IY84 436 aa14.23□□□□□ -0.13
SSBP3-206ENST00000420121 JARID2Q92833 1246 aaPredicted RBP14.23□□□□□ -0.13
SSBP3-206ENST00000420121 MAP3K2Q9Y2U5 619 aa14.23□□□□□ -0.13
SSBP3-206ENST00000420121 SCN9AQ15858 1988 aa14.23□□□□□ -0.13
SSBP3-206ENST00000420121 PI4KAP2A4QPH2 592 aa14.22□□□□□ -0.13
SSBP3-206ENST00000420121 CXCL9Q07325 125 aa14.22□□□□□ -0.13
SSBP3-206ENST00000420121 WDR63Q8IWG1 891 aa14.22□□□□□ -0.13
SSBP3-206ENST00000420121 PI4KAP1Q8N8J0 262 aa14.22□□□□□ -0.13
SSBP3-206ENST00000420121 SUPT20HQ8NEM7 779 aa14.22□□□□□ -0.13
SSBP3-206ENST00000420121 CHMP4AQ9BY43 222 aa14.22□□□□□ -0.13
SSBP3-206ENST00000420121 SEC31BQ9NQW1 1179 aa14.22□□□□□ -0.13
SSBP3-206ENST00000420121 CWC25Q9NXE8 425 aaPredicted RBP14.22□□□□□ -0.13
SSBP3-206ENST00000420121 SALL2Q9Y467 1007 aaPredicted RBP14.22□□□□□ -0.13
SSBP3-206ENST00000420121 GJA3Q9Y6H8 435 aa14.22□□□□□ -0.13
SSBP3-206ENST00000420121 PSME4Q14997 1843 aa14.22□□□□□ -0.13
SSBP3-206ENST00000420121 YDJCA8MPS7 323 aa14.21□□□□□ -0.13
SSBP3-206ENST00000420121 VAMP4O75379 141 aa14.21□□□□□ -0.13
SSBP3-206ENST00000420121 DDX58O95786 925 aaKnown RBP14.21□□□□□ -0.13
SSBP3-206ENST00000420121 EPS15P42566 896 aa14.21□□□□□ -0.13
SSBP3-206ENST00000420121 EAPPQ56P03 285 aaPredicted RBP14.21□□□□□ -0.13
SSBP3-206ENST00000420121 ZNRF3Q9ULT6 936 aa14.21□□□□□ -0.13
SSBP3-206ENST00000420121 TRPM7Q96QT4 1865 aa14.21□□□□□ -0.14
SSBP3-206ENST00000420121 CDHR2Q9BYE9 1310 aa14.2□□□□□ -0.14
SSBP3-206ENST00000420121 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
SSBP3-206ENST00000420121 GPSM2P81274 684 aa14.2□□□□□ -0.14
SSBP3-206ENST00000420121 STK31Q9BXU1 1019 aa14.2□□□□□ -0.14
SSBP3-206ENST00000420121 TMX4Q9H1E5 349 aaPredicted RBP14.2□□□□□ -0.14
SSBP3-206ENST00000420121 POLLQ9UGP5 575 aa14.2□□□□□ -0.14
SSBP3-206ENST00000420121 ZNF646O15015 1829 aaPredicted RBP14.2□□□□□ -0.14
SSBP3-206ENST00000420121 PDE8AO60658 829 aa14.19□□□□□ -0.14
SSBP3-206ENST00000420121 RPS8P62241 208 aaKnown RBP14.19□□□□□ -0.14
SSBP3-206ENST00000420121 EXOSC9Q06265 439 aaKnown RBP14.19□□□□□ -0.14
SSBP3-206ENST00000420121 CWF19L2Q2TBE0 894 aaKnown RBP14.19□□□□□ -0.14
SSBP3-206ENST00000420121 PNMA8AQ86V59 439 aaPredicted RBP14.19□□□□□ -0.14
SSBP3-206ENST00000420121 FAM9BQ8IZU0 186 aa14.19□□□□□ -0.14
SSBP3-206ENST00000420121 CREBZFQ9NS37 354 aa14.19□□□□□ -0.14
SSBP3-206ENST00000420121 ZNF521Q96K83 1311 aa14.18□□□□□ -0.14
SSBP3-206ENST00000420121 NEURL1BA8MQ27 555 aa14.18□□□□□ -0.14
SSBP3-206ENST00000420121 FLIIQ13045 1269 aa14.18□□□□□ -0.14
SSBP3-206ENST00000420121 MAP1SQ66K74 1059 aaPredicted RBP14.18□□□□□ -0.14
SSBP3-206ENST00000420121 GPRC5DQ9NZD1 345 aa14.18□□□□□ -0.14
SSBP3-206ENST00000420121 NSFL1CQ9UNZ2 370 aaKnown RBP14.18□□□□□ -0.14
SSBP3-206ENST00000420121 A0A1B0GUL6 1792 aa14.17□□□□□ -0.14
SSBP3-206ENST00000420121 CIAPIN1Q6FI81 312 aa14.17□□□□□ -0.14
SSBP3-206ENST00000420121 GPR101Q96P66 508 aaPredicted RBP14.17□□□□□ -0.14
SSBP3-206ENST00000420121 CCDC85AQ96PX6 553 aaPredicted RBP14.17□□□□□ -0.14
SSBP3-206ENST00000420121 PODXL2Q9NZ53 605 aa14.17□□□□□ -0.14
SSBP3-206ENST00000420121 CLEC11AQ9Y240 323 aa14.17□□□□□ -0.14
SSBP3-206ENST00000420121 H7C1W4 665 aa14.16□□□□□ -0.14
SSBP3-206ENST00000420121 RAD17O75943 681 aa14.16□□□□□ -0.14
SSBP3-206ENST00000420121 LMOD1P29536 600 aaPredicted RBP14.16□□□□□ -0.14
SSBP3-206ENST00000420121 GMPSP49915 693 aaPredicted RBP14.16□□□□□ -0.14
SSBP3-206ENST00000420121 CASP7P55210 303 aa14.16□□□□□ -0.14
SSBP3-206ENST00000420121 CTSWP56202 376 aa14.16□□□□□ -0.14
SSBP3-206ENST00000420121 CCDC152Q4G0S7 254 aa14.16□□□□□ -0.14
SSBP3-206ENST00000420121 CNTROBQ8N137 903 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms