RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 IL17RAQ96F46 866 aa20.38■□□□□ 0.85
SSBP3-205ENST00000417664 DIAPH3Q9NSV4 1193 aa20.38■□□□□ 0.85
SSBP3-205ENST00000417664 TLR7Q9NYK1 1049 aaKnown RBP20.38■□□□□ 0.85
SSBP3-205ENST00000417664 UBN2Q6ZU65 1347 aa20.38■□□□□ 0.85
SSBP3-205ENST00000417664 TTLL11Q8NHH1 800 aa20.38■□□□□ 0.85
SSBP3-205ENST00000417664 ANO2Q9NQ90 1003 aa20.38■□□□□ 0.85
SSBP3-205ENST00000417664 CEP126Q9P2H0 1117 aa20.38■□□□□ 0.85
SSBP3-205ENST00000417664 AKAP2Q9Y2D5 859 aa20.38■□□□□ 0.85
SSBP3-205ENST00000417664 TAF7LQ5H9L4 462 aa20.37■□□□□ 0.85
SSBP3-205ENST00000417664 MYH3P11055 1940 aa20.37■□□□□ 0.85
SSBP3-205ENST00000417664 BTAF1O14981 1849 aa20.37■□□□□ 0.85
SSBP3-205ENST00000417664 RFX7Q2KHR2 1363 aa20.36■□□□□ 0.85
SSBP3-205ENST00000417664 SH3TC1Q8TE82 1336 aa20.36■□□□□ 0.85
SSBP3-205ENST00000417664 LINC00116Q8NCU8 138 aa20.36■□□□□ 0.85
SSBP3-205ENST00000417664 UTP14AQ9BVJ6 771 aaKnown RBP20.36■□□□□ 0.85
SSBP3-205ENST00000417664 RAD50Q92878 1312 aa20.36■□□□□ 0.85
SSBP3-205ENST00000417664 ANKRD18BA2A2Z9 1011 aa20.35■□□□□ 0.85
SSBP3-205ENST00000417664 KIAA1211Q6ZU35 1233 aa20.35■□□□□ 0.85
SSBP3-205ENST00000417664 BOLA2Q9H3K6 86 aa20.35■□□□□ 0.85
SSBP3-205ENST00000417664 LRRC24Q50LG9 513 aa20.35■□□□□ 0.85
SSBP3-205ENST00000417664 SEPT12Q8IYM1 358 aa20.35■□□□□ 0.85
SSBP3-205ENST00000417664 ZNF609O15014 1411 aa20.34■□□□□ 0.85
SSBP3-205ENST00000417664 ST18O60284 1047 aa20.34■□□□□ 0.85
SSBP3-205ENST00000417664 ITGA6P23229 1130 aa20.34■□□□□ 0.85
SSBP3-205ENST00000417664 ZNF594Q96JF6 807 aaPredicted RBP20.34■□□□□ 0.85
SSBP3-205ENST00000417664 DBNDD2Q9BQY9 259 aa20.34■□□□□ 0.85
SSBP3-205ENST00000417664 ANTXR1Q9H6X2 564 aa20.34■□□□□ 0.85
SSBP3-205ENST00000417664 BCORQ6W2J9 1755 aa20.33■□□□□ 0.85
SSBP3-205ENST00000417664 K7ELQ4 463 aaPredicted RBP20.33■□□□□ 0.85
SSBP3-205ENST00000417664 SUSD4Q5VX71 490 aa20.33■□□□□ 0.85
SSBP3-205ENST00000417664 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.33■□□□□ 0.85
SSBP3-205ENST00000417664 HAUS7Q99871 368 aa20.33■□□□□ 0.85
SSBP3-205ENST00000417664 QTRT2Q9H974 415 aaKnown RBP20.33■□□□□ 0.85
SSBP3-205ENST00000417664 RPS6KA4O75676 772 aa20.32■□□□□ 0.84
SSBP3-205ENST00000417664 CWC27Q6UX04 472 aaKnown RBP20.32■□□□□ 0.84
SSBP3-205ENST00000417664 SYNE4Q8N205 404 aa20.32■□□□□ 0.84
SSBP3-205ENST00000417664 SNRKQ9NRH2 765 aa20.32■□□□□ 0.84
SSBP3-205ENST00000417664 NIP7Q9Y221 180 aaKnown RBP eCLIP20.32■□□□□ 0.84
SSBP3-205ENST00000417664 GREM2Q9H772 168 aa20.32■□□□□ 0.84
SSBP3-205ENST00000417664 SBF2Q86WG5 1849 aa20.31■□□□□ 0.84
SSBP3-205ENST00000417664 A0A1B0GUL7 405 aa20.31■□□□□ 0.84
SSBP3-205ENST00000417664 HSPA4P34932 840 aa20.31■□□□□ 0.84
SSBP3-205ENST00000417664 LDHAL6AQ6ZMR3 332 aa20.31■□□□□ 0.84
SSBP3-205ENST00000417664 NEUROD6Q96NK8 337 aa20.31■□□□□ 0.84
SSBP3-205ENST00000417664 FSD1Q9BTV5 496 aa20.31■□□□□ 0.84
SSBP3-205ENST00000417664 PUS3Q9BZE2 481 aaKnown RBP20.31■□□□□ 0.84
SSBP3-205ENST00000417664 BCL11BQ9C0K0 894 aaPredicted RBP20.31■□□□□ 0.84
SSBP3-205ENST00000417664 LSG1Q9H089 658 aaKnown RBP20.31■□□□□ 0.84
SSBP3-205ENST00000417664 CCNL1Q9UK58 526 aaPredicted RBP20.31■□□□□ 0.84
SSBP3-205ENST00000417664 RIPOR2Q9Y4F9 1068 aa20.31■□□□□ 0.84
SSBP3-205ENST00000417664 LY75O60449 1722 aa20.31■□□□□ 0.84
SSBP3-205ENST00000417664 MCM2P49736 904 aa20.3■□□□□ 0.84
SSBP3-205ENST00000417664 RTL9Q8NET4 1388 aa20.3■□□□□ 0.84
SSBP3-205ENST00000417664 NTSR2O95665 410 aa20.29■□□□□ 0.84
SSBP3-205ENST00000417664 HMGB2P26583 209 aaKnown RBP20.29■□□□□ 0.84
SSBP3-205ENST00000417664 PTF1AQ7RTS3 328 aa20.29■□□□□ 0.84
SSBP3-205ENST00000417664 IL25Q9H293 177 aa20.29■□□□□ 0.84
SSBP3-205ENST00000417664 SLKQ9H2G2 1235 aaPredicted RBP20.29■□□□□ 0.84
SSBP3-205ENST00000417664 ABCC12Q96J65 1359 aa20.29■□□□□ 0.84
SSBP3-205ENST00000417664 TIMM10P62072 90 aa20.29■□□□□ 0.84
SSBP3-205ENST00000417664 CCDC152Q4G0S7 254 aa20.28■□□□□ 0.84
SSBP3-205ENST00000417664 CCDC158Q5M9N0 1113 aa20.28■□□□□ 0.84
SSBP3-205ENST00000417664 CNNM1Q9NRU3 951 aa20.28■□□□□ 0.84
SSBP3-205ENST00000417664 CHMP5Q9NZZ3 219 aa20.28■□□□□ 0.84
SSBP3-205ENST00000417664 NARFQ9UHQ1 456 aa20.28■□□□□ 0.84
SSBP3-205ENST00000417664 SPEF2Q9C093 1822 aa20.28■□□□□ 0.84
SSBP3-205ENST00000417664 LAMB2P55268 1798 aa20.27■□□□□ 0.84
SSBP3-205ENST00000417664 METTL24Q5JXM2 366 aa20.27■□□□□ 0.84
SSBP3-205ENST00000417664 FAM196AQ6ZSG2 479 aa20.27■□□□□ 0.84
SSBP3-205ENST00000417664 CCDC85AQ96PX6 553 aaPredicted RBP20.27■□□□□ 0.84
SSBP3-205ENST00000417664 CIZ1Q9ULV3 898 aaPredicted RBP20.27■□□□□ 0.84
SSBP3-205ENST00000417664 RTCBQ9Y3I0 505 aaKnown RBP20.27■□□□□ 0.84
SSBP3-205ENST00000417664 SCN7AQ01118 1682 aa20.27■□□□□ 0.84
SSBP3-205ENST00000417664 LRP5O75197 1615 aa20.26■□□□□ 0.83
SSBP3-205ENST00000417664 CD2BP2O95400 341 aaKnown RBP20.26■□□□□ 0.83
SSBP3-205ENST00000417664 KBTBD3Q8NAB2 608 aa20.26■□□□□ 0.83
SSBP3-205ENST00000417664 MROH5Q6ZUA9 1318 aa20.26■□□□□ 0.83
SSBP3-205ENST00000417664 NMIQ13287 307 aaPredicted RBP20.26■□□□□ 0.83
SSBP3-205ENST00000417664 FAM182BQ5T319 152 aa20.26■□□□□ 0.83
SSBP3-205ENST00000417664 RIC1Q4ADV7 1423 aa20.26■□□□□ 0.83
SSBP3-205ENST00000417664 HSP90AA1P07900 732 aaKnown RBP20.25■□□□□ 0.83
SSBP3-205ENST00000417664 IFIT1P09914 478 aaKnown RBP20.25■□□□□ 0.83
SSBP3-205ENST00000417664 LRRFIP1Q32MZ4 808 aaKnown RBP20.25■□□□□ 0.83
SSBP3-205ENST00000417664 GORABQ5T7V8 394 aa20.25■□□□□ 0.83
SSBP3-205ENST00000417664 DNAJC2Q99543 621 aaKnown RBP20.25■□□□□ 0.83
SSBP3-205ENST00000417664 PAG1Q9NWQ8 432 aa20.25■□□□□ 0.83
SSBP3-205ENST00000417664 CCDC171Q6TFL3 1326 aa20.25■□□□□ 0.83
SSBP3-205ENST00000417664 GNPATO15228 680 aa20.24■□□□□ 0.83
SSBP3-205ENST00000417664 ZPR1O75312 459 aa20.24■□□□□ 0.83
SSBP3-205ENST00000417664 HCLS1P14317 486 aaPredicted RBP20.24■□□□□ 0.83
SSBP3-205ENST00000417664 ATP2B3Q16720 1220 aa20.24■□□□□ 0.83
SSBP3-205ENST00000417664 VGLL2Q8N8G2 317 aa20.24■□□□□ 0.83
SSBP3-205ENST00000417664 KCNB2Q92953 911 aa20.24■□□□□ 0.83
SSBP3-205ENST00000417664 XAGE2Q96GT9 111 aa20.24■□□□□ 0.83
SSBP3-205ENST00000417664 ZNF512BQ96KM6 892 aaPredicted RBP20.24■□□□□ 0.83
SSBP3-205ENST00000417664 NYXQ9GZU5 481 aa20.24■□□□□ 0.83
SSBP3-205ENST00000417664 TAF1LQ8IZX4 1826 aa20.24■□□□□ 0.83
SSBP3-205ENST00000417664 DDX60Q8IY21 1712 aaKnown RBP20.24■□□□□ 0.83
SSBP3-205ENST00000417664 MED23Q9ULK4 1368 aa20.24■□□□□ 0.83
SSBP3-205ENST00000417664 PDE8BO95263 885 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms