RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 PNMA6FA0A0J9YX94 578 aa10.6□□□□□ -0.71
LINC00343-202ENST00000415294 UBAP1LF5GYI3 381 aa10.6□□□□□ -0.71
LINC00343-202ENST00000415294 EGFRP00533 1210 aa10.6□□□□□ -0.71
LINC00343-202ENST00000415294 KCNQ4P56696 695 aa10.6□□□□□ -0.71
LINC00343-202ENST00000415294 MRPL58Q14197 206 aaKnown RBP10.6□□□□□ -0.71
LINC00343-202ENST00000415294 TMC4Q7Z404 712 aa10.6□□□□□ -0.71
LINC00343-202ENST00000415294 SNX29Q8TEQ0 813 aa10.6□□□□□ -0.71
LINC00343-202ENST00000415294 GPAMQ9HCL2 828 aa10.6□□□□□ -0.71
LINC00343-202ENST00000415294 KIF13AQ9H1H9 1805 aa10.6□□□□□ -0.71
LINC00343-202ENST00000415294 CFTRP13569 1480 aa10.6□□□□□ -0.71
LINC00343-202ENST00000415294 EIF1AYO14602 144 aaKnown RBP10.59□□□□□ -0.71
LINC00343-202ENST00000415294 TERTO14746 1132 aaKnown RBP10.59□□□□□ -0.71
LINC00343-202ENST00000415294 CPNE3O75131 537 aaKnown RBP10.59□□□□□ -0.71
LINC00343-202ENST00000415294 TCF3P15923 654 aa10.59□□□□□ -0.71
LINC00343-202ENST00000415294 ZNF438Q7Z4V0 828 aa10.59□□□□□ -0.71
LINC00343-202ENST00000415294 KLRG1Q96E93 195 aa10.59□□□□□ -0.71
LINC00343-202ENST00000415294 DUSP9Q99956 384 aaKnown RBP10.59□□□□□ -0.71
LINC00343-202ENST00000415294 MRS2Q9HD23 443 aa10.59□□□□□ -0.71
LINC00343-202ENST00000415294 PARP2Q9UGN5 583 aa10.59□□□□□ -0.71
LINC00343-202ENST00000415294 MROH2BQ7Z745 1585 aa10.59□□□□□ -0.71
LINC00343-202ENST00000415294 H7C1W4 665 aa10.58□□□□□ -0.71
LINC00343-202ENST00000415294 FAM157BP0CG42 384 aa10.58□□□□□ -0.71
LINC00343-202ENST00000415294 DAB2P98082 770 aa10.58□□□□□ -0.71
LINC00343-202ENST00000415294 CMTR1Q8N1G2 835 aaKnown RBP10.58□□□□□ -0.71
LINC00343-202ENST00000415294 GMCL1Q96IK5 515 aa10.58□□□□□ -0.71
LINC00343-202ENST00000415294 GAS2L1Q99501 681 aaPredicted RBP10.58□□□□□ -0.71
LINC00343-202ENST00000415294 RUBCNLQ9H714 662 aa10.58□□□□□ -0.71
LINC00343-202ENST00000415294 KCNMB2Q9Y691 235 aa10.58□□□□□ -0.71
LINC00343-202ENST00000415294 GAPVD1Q14C86 1478 aa10.58□□□□□ -0.72
LINC00343-202ENST00000415294 SENP3-EIF4A1A0A087X0R7 540 aa10.58□□□□□ -0.72
LINC00343-202ENST00000415294 TNFRSF21O75509 655 aa10.58□□□□□ -0.72
LINC00343-202ENST00000415294 GNA15P30679 374 aa10.58□□□□□ -0.72
LINC00343-202ENST00000415294 LAMC2Q13753 1193 aa10.58□□□□□ -0.72
LINC00343-202ENST00000415294 BRD7Q9NPI1 651 aa10.58□□□□□ -0.72
LINC00343-202ENST00000415294 AQRO60306 1485 aaKnown RBP eCLIP10.57□□□□□ -0.72
LINC00343-202ENST00000415294 SORBS3O60504 671 aa10.57□□□□□ -0.72
LINC00343-202ENST00000415294 XYLBO75191 536 aa10.57□□□□□ -0.72
LINC00343-202ENST00000415294 PSMD2Q13200 908 aa10.57□□□□□ -0.72
LINC00343-202ENST00000415294 TRIP4Q15650 581 aaPredicted RBP10.57□□□□□ -0.72
LINC00343-202ENST00000415294 ELP3Q9H9T3 547 aa10.57□□□□□ -0.72
LINC00343-202ENST00000415294 EFCC1Q9HA90 598 aa10.57□□□□□ -0.72
LINC00343-202ENST00000415294 GIPC1O14908 333 aa10.56□□□□□ -0.72
LINC00343-202ENST00000415294 RECKO95980 971 aa10.56□□□□□ -0.72
LINC00343-202ENST00000415294 ORC1Q13415 861 aa10.56□□□□□ -0.72
LINC00343-202ENST00000415294 PMEPA1Q969W9 287 aa10.56□□□□□ -0.72
LINC00343-202ENST00000415294 SPG7Q9UQ90 795 aa10.56□□□□□ -0.72
LINC00343-202ENST00000415294 PCDHGC4Q9Y5F7 938 aa10.56□□□□□ -0.72
LINC00343-202ENST00000415294 NLRP13Q86W25 1043 aa10.55□□□□□ -0.72
LINC00343-202ENST00000415294 ZCCHC2Q9C0B9 1178 aaKnown RBP10.55□□□□□ -0.72
LINC00343-202ENST00000415294 KCNH4Q9UQ05 1017 aa10.55□□□□□ -0.72
LINC00343-202ENST00000415294 SLC35F4A4IF30 521 aa10.54□□□□□ -0.72
LINC00343-202ENST00000415294 ATXN7O15265 892 aaPredicted RBP10.54□□□□□ -0.72
LINC00343-202ENST00000415294 EFSO43281 561 aa10.54□□□□□ -0.72
LINC00343-202ENST00000415294 PHACTR2O75167 634 aa10.54□□□□□ -0.72
LINC00343-202ENST00000415294 PTSQ03393 145 aa10.54□□□□□ -0.72
LINC00343-202ENST00000415294 WWC3Q9ULE0 1092 aa10.54□□□□□ -0.72
LINC00343-202ENST00000415294 A6NHS1 94 aa10.53□□□□□ -0.72
LINC00343-202ENST00000415294 SCAMP3O14828 347 aaKnown RBP10.53□□□□□ -0.72
LINC00343-202ENST00000415294 TSNAXIP1Q2TAA8 658 aa10.53□□□□□ -0.72
LINC00343-202ENST00000415294 RIPOR1Q6ZS17 1223 aa10.53□□□□□ -0.72
LINC00343-202ENST00000415294 SLC16A10Q8TF71 515 aa10.53□□□□□ -0.72
LINC00343-202ENST00000415294 CFHR5Q9BXR6 569 aa10.53□□□□□ -0.72
LINC00343-202ENST00000415294 NUCKS1Q9H1E3 243 aaKnown RBP10.53□□□□□ -0.72
LINC00343-202ENST00000415294 ZFYVE28Q9HCC9 887 aa10.53□□□□□ -0.72
LINC00343-202ENST00000415294 ABI2Q9NYB9 513 aaPredicted RBP10.53□□□□□ -0.72
LINC00343-202ENST00000415294 NXF1Q9UBU9 619 aaKnown RBP10.53□□□□□ -0.72
LINC00343-202ENST00000415294 WIPF1O43516 503 aa10.52□□□□□ -0.73
LINC00343-202ENST00000415294 GRNP28799 593 aaKnown RBP10.52□□□□□ -0.73
LINC00343-202ENST00000415294 TRIM22Q8IYM9 498 aa10.52□□□□□ -0.73
LINC00343-202ENST00000415294 USP20Q9Y2K6 914 aa10.52□□□□□ -0.73
LINC00343-202ENST00000415294 INSM1Q01101 510 aaPredicted RBP10.51□□□□□ -0.73
LINC00343-202ENST00000415294 BACH2Q9BYV9 841 aa10.51□□□□□ -0.73
LINC00343-202ENST00000415294 NLRP2Q9NX02 1062 aa10.51□□□□□ -0.73
LINC00343-202ENST00000415294 VTI1BQ9UEU0 232 aa10.51□□□□□ -0.73
LINC00343-202ENST00000415294 FOXD3Q9UJU5 478 aaPredicted RBP10.51□□□□□ -0.73
LINC00343-202ENST00000415294 AK5Q9Y6K8 562 aa10.51□□□□□ -0.73
LINC00343-202ENST00000415294 SYNJ1O43426 1573 aa10.5□□□□□ -0.73
LINC00343-202ENST00000415294 CCINQ13939 588 aa10.5□□□□□ -0.73
LINC00343-202ENST00000415294 LCE2CQ5TA81 110 aa10.5□□□□□ -0.73
LINC00343-202ENST00000415294 TTC39BQ5VTQ0 682 aaPredicted RBP10.5□□□□□ -0.73
LINC00343-202ENST00000415294 CCDC74AQ96AQ1 378 aa10.5□□□□□ -0.73
LINC00343-202ENST00000415294 SRCIN1Q9C0H9 1055 aa10.5□□□□□ -0.73
LINC00343-202ENST00000415294 METTL5Q9NRN9 209 aaKnown RBP10.5□□□□□ -0.73
LINC00343-202ENST00000415294 TMEM63CQ9P1W3 806 aa10.5□□□□□ -0.73
LINC00343-202ENST00000415294 TOPBP1Q92547 1522 aa10.49□□□□□ -0.73
LINC00343-202ENST00000415294 SYNJ2O15056 1496 aa10.49□□□□□ -0.73
LINC00343-202ENST00000415294 TNP2Q05952 138 aa10.49□□□□□ -0.73
LINC00343-202ENST00000415294 CCDC155Q8N6L0 562 aa10.49□□□□□ -0.73
LINC00343-202ENST00000415294 SETDB2Q96T68 719 aa10.49□□□□□ -0.73
LINC00343-202ENST00000415294 ADGRL1O94910 1474 aa10.48□□□□□ -0.73
LINC00343-202ENST00000415294 KDM6BO15054 1643 aa10.48□□□□□ -0.73
LINC00343-202ENST00000415294 EIF4BP23588 611 aaKnown RBP10.48□□□□□ -0.73
LINC00343-202ENST00000415294 UBAP2LQ14157 1087 aaKnown RBP10.48□□□□□ -0.73
LINC00343-202ENST00000415294 CRELD1Q96HD1 420 aa10.48□□□□□ -0.73
LINC00343-202ENST00000415294 NDFIP2Q9NV92 336 aa10.48□□□□□ -0.73
LINC00343-202ENST00000415294 DISP3Q9P2K9 1392 aa10.48□□□□□ -0.73
LINC00343-202ENST00000415294 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
LINC00343-202ENST00000415294 KHNYNO15037 678 aaKnown RBP10.47□□□□□ -0.73
LINC00343-202ENST00000415294 MAPTP10636 758 aaKnown RBP10.47□□□□□ -0.73
LINC00343-202ENST00000415294 VEGFBP49765 207 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms